RNA–Protein interactions for RNA: ENST00000581631.1

SMCHD1-206, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 729 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-206ENST00000581631 SAC3D1A6NKF1 404 aa3.64□□□□□ -1.83
SMCHD1-206ENST00000581631 TBC1D3LB9A6J9 549 aa3.64□□□□□ -1.83
SMCHD1-206ENST00000581631 TBC1D3HP0C7X1 549 aa3.64□□□□□ -1.83
SMCHD1-206ENST00000581631 MYZAPP0CAP1 466 aa3.64□□□□□ -1.83
SMCHD1-206ENST00000581631 GM2AP17900 193 aa3.64□□□□□ -1.83
SMCHD1-206ENST00000581631 ZNF569Q5MCW4 686 aa3.64□□□□□ -1.83
SMCHD1-206ENST00000581631 TBC1D3GQ6DHY5 549 aa3.64□□□□□ -1.83
SMCHD1-206ENST00000581631 TBC1D3CQ6IPX1 549 aa3.64□□□□□ -1.83
SMCHD1-206ENST00000581631 TBC1D3Q8IZP1 549 aaPredicted RBP3.64□□□□□ -1.83
SMCHD1-206ENST00000581631 CLEC4CQ8WTT0 213 aa3.64□□□□□ -1.83
SMCHD1-206ENST00000581631 HMGB4Q8WW32 186 aa3.64□□□□□ -1.83
SMCHD1-206ENST00000581631 SLC25A33Q9BSK2 321 aa3.64□□□□□ -1.83
SMCHD1-206ENST00000581631 WDR12Q9GZL7 423 aaKnown RBP3.64□□□□□ -1.83
SMCHD1-206ENST00000581631 NFU1Q9UMS0 254 aa3.64□□□□□ -1.83
SMCHD1-206ENST00000581631 CNTN6Q9UQ52 1028 aa3.64□□□□□ -1.83
SMCHD1-206ENST00000581631 COPG1Q9Y678 874 aaKnown RBP3.64□□□□□ -1.83
SMCHD1-206ENST00000581631 FAM90A18PA6NE21 464 aa3.63□□□□□ -1.83
SMCHD1-206ENST00000581631 FAM90A16PA6NEW6 464 aa3.63□□□□□ -1.83
SMCHD1-206ENST00000581631 FAM90A9PA6NNJ1 464 aa3.63□□□□□ -1.83
SMCHD1-206ENST00000581631 SLC38A8A6NNN8 435 aa3.63□□□□□ -1.83
SMCHD1-206ENST00000581631 ERI2A8K979 691 aaKnown RBP3.63□□□□□ -1.83
SMCHD1-206ENST00000581631 FAM90A5PA8MXJ8 464 aa3.63□□□□□ -1.83
SMCHD1-206ENST00000581631 TULP2O00295 520 aa3.63□□□□□ -1.83
SMCHD1-206ENST00000581631 LDLRP01130 860 aa3.63□□□□□ -1.83
SMCHD1-206ENST00000581631 FAM90A15PP0C7V4 464 aa3.63□□□□□ -1.83
SMCHD1-206ENST00000581631 FAM90A14PP0C7W9 464 aa3.63□□□□□ -1.83
SMCHD1-206ENST00000581631 CFC1BP0CG36 223 aa3.63□□□□□ -1.83
SMCHD1-206ENST00000581631 CFC1P0CG37 223 aa3.63□□□□□ -1.83
SMCHD1-206ENST00000581631 SETSIPP0DME0 302 aa3.63□□□□□ -1.83
SMCHD1-206ENST00000581631 NAGAP17050 411 aa3.63□□□□□ -1.83
SMCHD1-206ENST00000581631 KLRC2P26717 231 aa3.63□□□□□ -1.83
SMCHD1-206ENST00000581631 PDIA3P30101 505 aaKnown RBP3.63□□□□□ -1.83
SMCHD1-206ENST00000581631 VEGFCP49767 419 aa3.63□□□□□ -1.83
SMCHD1-206ENST00000581631 TMPRSS3P57727 454 aa3.63□□□□□ -1.83
SMCHD1-206ENST00000581631 RBM6P78332 1123 aaKnown RBP3.63□□□□□ -1.83
SMCHD1-206ENST00000581631 TNFAIP2Q03169 654 aa3.63□□□□□ -1.83
SMCHD1-206ENST00000581631 PTK2BQ14289 1009 aa3.63□□□□□ -1.83
SMCHD1-206ENST00000581631 CCDC6Q16204 474 aa3.63□□□□□ -1.83
SMCHD1-206ENST00000581631 PFKFB4Q16877 469 aa3.63□□□□□ -1.83
SMCHD1-206ENST00000581631 HEPHL1Q6MZM0 1159 aa3.63□□□□□ -1.83
SMCHD1-206ENST00000581631 TOGARAM2Q6ZUX3 1019 aa3.63□□□□□ -1.83
SMCHD1-206ENST00000581631 NAGSQ8N159 534 aa3.63□□□□□ -1.83
SMCHD1-206ENST00000581631 DPP10Q8N608 796 aa3.63□□□□□ -1.83
SMCHD1-206ENST00000581631 ATG16L2Q8NAA4 619 aa3.63□□□□□ -1.83
SMCHD1-206ENST00000581631 SPATA20Q8TB22 786 aa3.63□□□□□ -1.83
SMCHD1-206ENST00000581631 ADGRG7Q96K78 797 aa3.63□□□□□ -1.83
SMCHD1-206ENST00000581631 IL17FQ96PD4 163 aa3.63□□□□□ -1.83
SMCHD1-206ENST00000581631 CRB3Q9BUF7 120 aa3.63□□□□□ -1.83
SMCHD1-206ENST00000581631 HIPK3Q9H422 1215 aa3.63□□□□□ -1.83
SMCHD1-206ENST00000581631 SEPSECSQ9HD40 501 aaKnown RBP3.63□□□□□ -1.83
SMCHD1-206ENST00000581631 ABHD14A-ACY1A0A1B0GW23 586 aa3.62□□□□□ -1.83
SMCHD1-206ENST00000581631 AGAP5A6NIR3 686 aa3.62□□□□□ -1.83
SMCHD1-206ENST00000581631 PRAC2D3DTV9 90 aa3.62□□□□□ -1.83
SMCHD1-206ENST00000581631 NPIPB11E5RHQ5 1161 aa3.62□□□□□ -1.83
SMCHD1-206ENST00000581631 SKAP2O75563 359 aaPredicted RBP3.62□□□□□ -1.83
SMCHD1-206ENST00000581631 LARGE1O95461 756 aa3.62□□□□□ -1.83
SMCHD1-206ENST00000581631 ACSM2AQ08AH3 577 aa3.62□□□□□ -1.83
SMCHD1-206ENST00000581631 GALNT1Q10472 559 aaPredicted RBP3.62□□□□□ -1.83
SMCHD1-206ENST00000581631 SNTA1Q13424 505 aa3.62□□□□□ -1.83
SMCHD1-206ENST00000581631 HDAC1Q13547 482 aaPredicted RBP3.62□□□□□ -1.83
SMCHD1-206ENST00000581631 FCN2Q15485 313 aa3.62□□□□□ -1.83
SMCHD1-206ENST00000581631 ZACNQ401N2 412 aa3.62□□□□□ -1.83
SMCHD1-206ENST00000581631 TRIM60Q495X7 471 aa3.62□□□□□ -1.83
SMCHD1-206ENST00000581631 EFHC1Q5JVL4 640 aa3.62□□□□□ -1.83
SMCHD1-206ENST00000581631 PMS2CLQ68D20 193 aa3.62□□□□□ -1.83
SMCHD1-206ENST00000581631 PGBD2Q6P3X8 592 aa3.62□□□□□ -1.83
SMCHD1-206ENST00000581631 HORMAD2Q8N7B1 307 aa3.62□□□□□ -1.83
SMCHD1-206ENST00000581631 ZNF114Q8NC26 417 aa3.62□□□□□ -1.83
SMCHD1-206ENST00000581631 CEP76Q8TAP6 659 aa3.62□□□□□ -1.83
SMCHD1-206ENST00000581631 RTKNQ9BST9 563 aa3.62□□□□□ -1.83
SMCHD1-206ENST00000581631 KATNAL1Q9BW62 490 aa3.62□□□□□ -1.83
SMCHD1-206ENST00000581631 TMEM120AQ9BXJ8 343 aa3.62□□□□□ -1.83
SMCHD1-206ENST00000581631 BRD8Q9H0E9 1235 aa3.62□□□□□ -1.83
SMCHD1-206ENST00000581631 ZNF700Q9H0M5 742 aa3.62□□□□□ -1.83
SMCHD1-206ENST00000581631 Q9N2J8 555 aa3.62□□□□□ -1.83
SMCHD1-206ENST00000581631 LIN7CQ9NUP9 197 aaKnown RBP3.62□□□□□ -1.83
SMCHD1-206ENST00000581631 LRFN1Q9P244 771 aa3.62□□□□□ -1.83
SMCHD1-206ENST00000581631 LZTS1Q9Y250 596 aa3.62□□□□□ -1.83
SMCHD1-206ENST00000581631 DAAM1Q9Y4D1 1078 aa3.62□□□□□ -1.83
SMCHD1-206ENST00000581631 TCRBV7S3A2A0A539 114 aa3.61□□□□□ -1.83
SMCHD1-206ENST00000581631 SYT5O00445 386 aa3.61□□□□□ -1.83
SMCHD1-206ENST00000581631 LMX1BO60663 402 aa3.61□□□□□ -1.83
SMCHD1-206ENST00000581631 CLDN7O95471 211 aa3.61□□□□□ -1.83
SMCHD1-206ENST00000581631 ITGA2BP08514 1039 aa3.61□□□□□ -1.83
SMCHD1-206ENST00000581631 ANOS1P23352 680 aa3.61□□□□□ -1.83
SMCHD1-206ENST00000581631 HTR3AP46098 478 aa3.61□□□□□ -1.83
SMCHD1-206ENST00000581631 PUM3Q15397 648 aaKnown RBP3.61□□□□□ -1.83
SMCHD1-206ENST00000581631 ATPAF1Q5TC12 328 aaPredicted RBP3.61□□□□□ -1.83
SMCHD1-206ENST00000581631 STPG1Q5TH74 334 aa3.61□□□□□ -1.83
SMCHD1-206ENST00000581631 LIN54Q6MZP7 749 aa3.61□□□□□ -1.83
SMCHD1-206ENST00000581631 C1orf228Q6PIY5 440 aa3.61□□□□□ -1.83
SMCHD1-206ENST00000581631 SLC30A9Q6PML9 568 aa3.61□□□□□ -1.83
SMCHD1-206ENST00000581631 KIAA1324Q6UXG2 1013 aaKnown RBP3.61□□□□□ -1.83
SMCHD1-206ENST00000581631 C9orf139Q6ZV77 190 aa3.61□□□□□ -1.83
SMCHD1-206ENST00000581631 NOL8Q76FK4 1167 aaKnown RBP3.61□□□□□ -1.83
SMCHD1-206ENST00000581631 SPEM1Q8N4L4 309 aa3.61□□□□□ -1.83
SMCHD1-206ENST00000581631 LMNTD1Q8N9Z9 388 aa3.61□□□□□ -1.83
SMCHD1-206ENST00000581631 TEX45Q8NA69 505 aa3.61□□□□□ -1.83
SMCHD1-206ENST00000581631 VPS37AQ8NEZ2 397 aa3.61□□□□□ -1.83
SMCHD1-206ENST00000581631 SCAMP5Q8TAC9 235 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms