RNA–Protein interactions for RNA: ENST00000581598.1

CCDC42-203, Transcript of coiled-coil domain containing 42, humanhuman

TSL 4

Gene CCDC42, Length 538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-203ENST00000581598 PRNPP04156 253 aa21.39■■□□□ 1.01
CCDC42-203ENST00000581598 PTPN9P43378 593 aa21.39■■□□□ 1.01
CCDC42-203ENST00000581598 NXPH1P58417 271 aa21.39■■□□□ 1.01
CCDC42-203ENST00000581598 SHBQ15464 509 aa21.39■■□□□ 1.01
CCDC42-203ENST00000581598 ARL13BQ3SXY8 428 aa21.39■■□□□ 1.01
CCDC42-203ENST00000581598 RETSATQ6NUM9 610 aa21.39■■□□□ 1.01
CCDC42-203ENST00000581598 NEK5Q6P3R8 708 aa21.39■■□□□ 1.01
CCDC42-203ENST00000581598 STRADAQ7RTN6 431 aa21.39■■□□□ 1.01
CCDC42-203ENST00000581598 TMPRSS7Q7RTY8 843 aa21.39■■□□□ 1.01
CCDC42-203ENST00000581598 EMC1Q8N766 993 aa21.39■■□□□ 1.01
CCDC42-203ENST00000581598 RXFP2Q8WXD0 754 aa21.39■■□□□ 1.01
CCDC42-203ENST00000581598 CEP44Q9C0F1 390 aa21.39■■□□□ 1.01
CCDC42-203ENST00000581598 K7ERQ8 282 aa21.38■■□□□ 1.01
CCDC42-203ENST00000581598 SMAD6O43541 496 aaKnown RBP21.38■■□□□ 1.01
CCDC42-203ENST00000581598 MAGEC1O60732 1142 aa21.38■■□□□ 1.01
CCDC42-203ENST00000581598 RNGTTO60942 597 aaKnown RBP21.38■■□□□ 1.01
CCDC42-203ENST00000581598 SRGAP2O75044 1071 aa21.38■■□□□ 1.01
CCDC42-203ENST00000581598 RRM1P23921 792 aa21.38■■□□□ 1.01
CCDC42-203ENST00000581598 SDC4P31431 198 aa21.38■■□□□ 1.01
CCDC42-203ENST00000581598 RXRGP48443 463 aa21.38■■□□□ 1.01
CCDC42-203ENST00000581598 ZNF75DP51815 510 aa21.38■■□□□ 1.01
CCDC42-203ENST00000581598 TAS2R38P59533 333 aa21.38■■□□□ 1.01
CCDC42-203ENST00000581598 ATP11AP98196 1134 aa21.38■■□□□ 1.01
CCDC42-203ENST00000581598 PTP4A2Q12974 167 aa21.38■■□□□ 1.01
CCDC42-203ENST00000581598 SYCP1Q15431 976 aa21.38■■□□□ 1.01
CCDC42-203ENST00000581598 CCDC14Q49A88 953 aa21.38■■□□□ 1.01
CCDC42-203ENST00000581598 SETMARQ53H47 684 aaPredicted RBP21.38■■□□□ 1.01
CCDC42-203ENST00000581598 PIP5KL1Q5T9C9 394 aa21.38■■□□□ 1.01
CCDC42-203ENST00000581598 MANEALQ5VSG8 457 aa21.38■■□□□ 1.01
CCDC42-203ENST00000581598 C22orf39Q6P5X5 142 aa21.38■■□□□ 1.01
CCDC42-203ENST00000581598 OR7D4Q8NG98 312 aa21.38■■□□□ 1.01
CCDC42-203ENST00000581598 SAP25Q8TEE9 199 aa21.38■■□□□ 1.01
CCDC42-203ENST00000581598 CENPIQ92674 756 aaPredicted RBP21.38■■□□□ 1.01
CCDC42-203ENST00000581598 ERGIC2Q96RQ1 377 aa21.38■■□□□ 1.01
CCDC42-203ENST00000581598 C11orf70Q9BRQ4 267 aa21.38■■□□□ 1.01
CCDC42-203ENST00000581598 TRIM5Q9C035 493 aa21.38■■□□□ 1.01
CCDC42-203ENST00000581598 OSBPL2Q9H1P3 480 aa21.38■■□□□ 1.01
CCDC42-203ENST00000581598 FAM170AA1A519 330 aa21.37■■□□□ 1.01
CCDC42-203ENST00000581598 SRRM3A6NNA2 597 aaPredicted RBP21.37■■□□□ 1.01
CCDC42-203ENST00000581598 TEX33O43247 280 aa21.37■■□□□ 1.01
CCDC42-203ENST00000581598 BNIP3LO60238 219 aa21.37■■□□□ 1.01
CCDC42-203ENST00000581598 ADRA1BP35368 520 aa21.37■■□□□ 1.01
CCDC42-203ENST00000581598 PBX1P40424 430 aa21.37■■□□□ 1.01
CCDC42-203ENST00000581598 ARRB1P49407 418 aaPredicted RBP21.37■■□□□ 1.01
CCDC42-203ENST00000581598 SERPINH1P50454 418 aaKnown RBP21.37■■□□□ 1.01
CCDC42-203ENST00000581598 IL9RQ01113 521 aa21.37■■□□□ 1.01
CCDC42-203ENST00000581598 GNA12Q03113 381 aa21.37■■□□□ 1.01
CCDC42-203ENST00000581598 PHF13Q86YI8 300 aaPredicted RBP21.37■■□□□ 1.01
CCDC42-203ENST00000581598 NEK11Q8NG66 645 aa21.37■■□□□ 1.01
CCDC42-203ENST00000581598 SLC30A5Q8TAD4 765 aa21.37■■□□□ 1.01
CCDC42-203ENST00000581598 MRFAP1L1Q96HT8 127 aa21.37■■□□□ 1.01
CCDC42-203ENST00000581598 PCDHB18PQ96TA0 734 aa21.37■■□□□ 1.01
CCDC42-203ENST00000581598 FTSJ1Q9UET6 329 aa21.37■■□□□ 1.01
CCDC42-203ENST00000581598 OR12D3Q9UGF7 316 aa21.37■■□□□ 1.01
CCDC42-203ENST00000581598 PRAMEF26H0Y7S4 382 aa21.36■■□□□ 1.01
CCDC42-203ENST00000581598 CBX4O00257 560 aa21.36■■□□□ 1.01
CCDC42-203ENST00000581598 ZNF821O75541 412 aaPredicted RBP21.36■■□□□ 1.01
CCDC42-203ENST00000581598 TPM3P06753 285 aa21.36■■□□□ 1.01
CCDC42-203ENST00000581598 GLDCP23378 1020 aa21.36■■□□□ 1.01
CCDC42-203ENST00000581598 EPHA8P29322 1005 aaPredicted RBP21.36■■□□□ 1.01
CCDC42-203ENST00000581598 ETFBP38117 255 aa21.36■■□□□ 1.01
CCDC42-203ENST00000581598 RECQLP46063 649 aaPredicted RBP21.36■■□□□ 1.01
CCDC42-203ENST00000581598 NSFP46459 744 aaKnown RBP21.36■■□□□ 1.01
CCDC42-203ENST00000581598 MAPKAPK2P49137 400 aa21.36■■□□□ 1.01
CCDC42-203ENST00000581598 CLEC16AQ2KHT3 1053 aa21.36■■□□□ 1.01
CCDC42-203ENST00000581598 C15orf59Q2T9L4 293 aaPredicted RBP21.36■■□□□ 1.01
CCDC42-203ENST00000581598 LINGO4Q6UY18 593 aa21.36■■□□□ 1.01
CCDC42-203ENST00000581598 GALNT15Q8N3T1 639 aa21.36■■□□□ 1.01
CCDC42-203ENST00000581598 PCDH20Q8N6Y1 951 aaKnown RBP21.36■■□□□ 1.01
CCDC42-203ENST00000581598 JOSD2Q8TAC2 188 aa21.36■■□□□ 1.01
CCDC42-203ENST00000581598 ARRDC3Q96B67 414 aa21.36■■□□□ 1.01
CCDC42-203ENST00000581598 HDAC8Q9BY41 377 aa21.36■■□□□ 1.01
CCDC42-203ENST00000581598 ATP13A1Q9HD20 1204 aa21.36■■□□□ 1.01
CCDC42-203ENST00000581598 IL36AQ9UHA7 158 aa21.36■■□□□ 1.01
CCDC42-203ENST00000581598 PCDHGA1Q9Y5H4 931 aa21.36■■□□□ 1.01
CCDC42-203ENST00000581598 ARID1BQ8NFD5 2236 aaPredicted RBP21.35■■□□□ 1.01
CCDC42-203ENST00000581598 A0A1W2PQC6 194 aa21.35■■□□□ 1.01
CCDC42-203ENST00000581598 KPNA3O00505 521 aaPredicted RBP21.35■■□□□ 1.01
CCDC42-203ENST00000581598 CALB1P05937 261 aa21.35■■□□□ 1.01
CCDC42-203ENST00000581598 ITGAVP06756 1048 aa21.35■■□□□ 1.01
CCDC42-203ENST00000581598 KRT3P12035 628 aa21.35■■□□□ 1.01
CCDC42-203ENST00000581598 MAT2AP31153 395 aaKnown RBP21.35■■□□□ 1.01
CCDC42-203ENST00000581598 ARF5P84085 180 aa21.35■■□□□ 1.01
CCDC42-203ENST00000581598 UBXN1Q04323 297 aa21.35■■□□□ 1.01
CCDC42-203ENST00000581598 SCAPQ12770 1279 aa21.35■■□□□ 1.01
CCDC42-203ENST00000581598 STAT4Q14765 748 aa21.35■■□□□ 1.01
CCDC42-203ENST00000581598 CDO1Q16878 200 aa21.35■■□□□ 1.01
CCDC42-203ENST00000581598 POM121L1PQ3SYA9 428 aa21.35■■□□□ 1.01
CCDC42-203ENST00000581598 PRAMEF14Q5SWL7 426 aa21.35■■□□□ 1.01
CCDC42-203ENST00000581598 DPY19L3Q6ZPD9 716 aa21.35■■□□□ 1.01
CCDC42-203ENST00000581598 NLRP14Q86W24 1093 aa21.35■■□□□ 1.01
CCDC42-203ENST00000581598 SPATS2Q86XZ4 545 aaKnown RBP21.35■■□□□ 1.01
CCDC42-203ENST00000581598 PLPP6Q8IY26 295 aa21.35■■□□□ 1.01
CCDC42-203ENST00000581598 TMEM145Q8NBT3 493 aa21.35■■□□□ 1.01
CCDC42-203ENST00000581598 CHST14Q8NCH0 376 aa21.35■■□□□ 1.01
CCDC42-203ENST00000581598 C3orf20Q8ND61 904 aa21.35■■□□□ 1.01
CCDC42-203ENST00000581598 NTAN1Q96AB6 310 aa21.35■■□□□ 1.01
CCDC42-203ENST00000581598 PPP1R16AQ96I34 528 aa21.35■■□□□ 1.01
CCDC42-203ENST00000581598 SPON2Q9BUD6 331 aa21.35■■□□□ 1.01
CCDC42-203ENST00000581598 DYRK4Q9NR20 520 aa21.35■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms