RNA–Protein interactions for RNA: ENST00000580541.1

SKA2-205, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3 BASIC

Gene SKA2, Length 689 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-205ENST00000580541 PHF2O75151 1096 aa14.54□□□□□ -0.08
SKA2-205ENST00000580541 MAP3K6O95382 1288 aa14.54□□□□□ -0.08
SKA2-205ENST00000580541 CD72P21854 359 aa14.54□□□□□ -0.08
SKA2-205ENST00000580541 MMP13P45452 471 aa14.54□□□□□ -0.08
SKA2-205ENST00000580541 MAPK8P45983 427 aa14.54□□□□□ -0.08
SKA2-205ENST00000580541 FNTAP49354 379 aa14.54□□□□□ -0.08
SKA2-205ENST00000580541 SNRPD1P62314 119 aaKnown RBP14.54□□□□□ -0.08
SKA2-205ENST00000580541 IFI35P80217 286 aaPredicted RBP14.54□□□□□ -0.08
SKA2-205ENST00000580541 SNX1Q13596 522 aa14.54□□□□□ -0.08
SKA2-205ENST00000580541 ZNF234Q14588 700 aa14.54□□□□□ -0.08
SKA2-205ENST00000580541 GRM3Q14832 879 aa14.54□□□□□ -0.08
SKA2-205ENST00000580541 STARD3Q14849 445 aa14.54□□□□□ -0.08
SKA2-205ENST00000580541 DLG2Q15700 870 aa14.54□□□□□ -0.08
SKA2-205ENST00000580541 CYP1B1Q16678 543 aa14.54□□□□□ -0.08
SKA2-205ENST00000580541 TEX44Q53QW1 395 aa14.54□□□□□ -0.08
SKA2-205ENST00000580541 RALGPS1Q5JS13 557 aa14.54□□□□□ -0.08
SKA2-205ENST00000580541 LINGO4Q6UY18 593 aa14.54□□□□□ -0.08
SKA2-205ENST00000580541 TP53INP2Q8IXH6 220 aa14.54□□□□□ -0.08
SKA2-205ENST00000580541 TEX26Q8N6G2 289 aa14.54□□□□□ -0.08
SKA2-205ENST00000580541 CCDC89Q8N998 374 aa14.54□□□□□ -0.08
SKA2-205ENST00000580541 C12orf50Q8NA57 414 aaPredicted RBP14.54□□□□□ -0.08
SKA2-205ENST00000580541 CYB5D2Q8WUJ1 264 aa14.54□□□□□ -0.08
SKA2-205ENST00000580541 MAML1Q92585 1016 aa14.54□□□□□ -0.08
SKA2-205ENST00000580541 LRRC45Q96CN5 670 aa14.54□□□□□ -0.08
SKA2-205ENST00000580541 FBRSQ9HAH7 460 aa14.54□□□□□ -0.08
SKA2-205ENST00000580541 PDFQ9HBH1 243 aa14.54□□□□□ -0.08
SKA2-205ENST00000580541 RBM22Q9NW64 420 aaKnown RBP eCLIP14.54□□□□□ -0.08
SKA2-205ENST00000580541 SEPT10Q9P0V9 454 aa14.54□□□□□ -0.08
SKA2-205ENST00000580541 SHROOM3Q8TF72 1996 aa14.54□□□□□ -0.08
SKA2-205ENST00000580541 UNC80Q8N2C7 3258 aa14.53□□□□□ -0.08
SKA2-205ENST00000580541 EDDM13A0A1B0GTR0 161 aa14.53□□□□□ -0.08
SKA2-205ENST00000580541 KCNN4O15554 427 aa14.53□□□□□ -0.08
SKA2-205ENST00000580541 TMCC1O94876 653 aa14.53□□□□□ -0.08
SKA2-205ENST00000580541 GAS8O95995 478 aa14.53□□□□□ -0.08
SKA2-205ENST00000580541 JCHAINP01591 159 aa14.53□□□□□ -0.08
SKA2-205ENST00000580541 CHRNB1P11230 501 aa14.53□□□□□ -0.08
SKA2-205ENST00000580541 SRCP12931 536 aa14.53□□□□□ -0.08
SKA2-205ENST00000580541 GLDCP23378 1020 aa14.53□□□□□ -0.08
SKA2-205ENST00000580541 RBL1P28749 1068 aa14.53□□□□□ -0.08
SKA2-205ENST00000580541 TIE1P35590 1138 aa14.53□□□□□ -0.08
SKA2-205ENST00000580541 COILP38432 576 aaPredicted RBP14.53□□□□□ -0.08
SKA2-205ENST00000580541 KIR2DL1P43626 348 aaPredicted RBP14.53□□□□□ -0.08
SKA2-205ENST00000580541 SEC13P55735 322 aa14.53□□□□□ -0.08
SKA2-205ENST00000580541 RHOAP61586 193 aa14.53□□□□□ -0.08
SKA2-205ENST00000580541 ITKQ08881 620 aa14.53□□□□□ -0.08
SKA2-205ENST00000580541 SIX1Q15475 284 aaPredicted RBP14.53□□□□□ -0.08
SKA2-205ENST00000580541 C2orf27AQ580R0 203 aa14.53□□□□□ -0.08
SKA2-205ENST00000580541 IER5LQ5T953 404 aa14.53□□□□□ -0.08
SKA2-205ENST00000580541 NAIF1Q69YI7 327 aaPredicted RBP14.53□□□□□ -0.08
SKA2-205ENST00000580541 ITPRIPL1Q6GPH6 555 aa14.53□□□□□ -0.08
SKA2-205ENST00000580541 CCDC137Q6PK04 289 aaKnown RBP14.53□□□□□ -0.08
SKA2-205ENST00000580541 ARHGAP36Q6ZRI8 547 aa14.53□□□□□ -0.08
SKA2-205ENST00000580541 PID1Q7Z2X4 250 aa14.53□□□□□ -0.08
SKA2-205ENST00000580541 MAATS1Q7Z4T9 603 aa14.53□□□□□ -0.08
SKA2-205ENST00000580541 DSG4Q86SJ6 1040 aa14.53□□□□□ -0.08
SKA2-205ENST00000580541 CCDC33Q8N5R6 958 aa14.53□□□□□ -0.08
SKA2-205ENST00000580541 PRELID2Q8N945 189 aa14.53□□□□□ -0.08
SKA2-205ENST00000580541 NETO2Q8NC67 525 aa14.53□□□□□ -0.08
SKA2-205ENST00000580541 CCHCR1Q8TD31 782 aa14.53□□□□□ -0.08
SKA2-205ENST00000580541 USP33Q8TEY7 942 aa14.53□□□□□ -0.08
SKA2-205ENST00000580541 SORCS1Q8WY21 1168 aa14.53□□□□□ -0.08
SKA2-205ENST00000580541 PSKH2Q96QS6 385 aa14.53□□□□□ -0.08
SKA2-205ENST00000580541 SLCO3A1Q9UIG8 710 aa14.53□□□□□ -0.08
SKA2-205ENST00000580541 R3HDM2Q9Y2K5 976 aaKnown RBP14.53□□□□□ -0.08
SKA2-205ENST00000580541 MRFAP1Q9Y605 127 aa14.53□□□□□ -0.08
SKA2-205ENST00000580541 STON1Q9Y6Q2 735 aa14.53□□□□□ -0.08
SKA2-205ENST00000580541 COL4A2P08572 1712 aa14.52□□□□□ -0.08
SKA2-205ENST00000580541 CTAGE15A4D2H0 777 aa14.52□□□□□ -0.09
SKA2-205ENST00000580541 GOLGA6CA6NDK9 693 aa14.52□□□□□ -0.09
SKA2-205ENST00000580541 GOLGA6BA6NDN3 693 aa14.52□□□□□ -0.09
SKA2-205ENST00000580541 C5orf60A6NFR6 353 aa14.52□□□□□ -0.09
SKA2-205ENST00000580541 KCNK1O00180 336 aa14.52□□□□□ -0.09
SKA2-205ENST00000580541 OPHN1O60890 802 aa14.52□□□□□ -0.09
SKA2-205ENST00000580541 RNASEH1O60930 286 aaKnown RBP14.52□□□□□ -0.09
SKA2-205ENST00000580541 RNF40O75150 1001 aa14.52□□□□□ -0.09
SKA2-205ENST00000580541 POP4O95707 220 aaKnown RBP14.52□□□□□ -0.09
SKA2-205ENST00000580541 IGSF6O95976 241 aa14.52□□□□□ -0.09
SKA2-205ENST00000580541 GSRP00390 522 aa14.52□□□□□ -0.09
SKA2-205ENST00000580541 MT-CO1P00395 513 aa14.52□□□□□ -0.09
SKA2-205ENST00000580541 GOLGA6DP0CG33 693 aa14.52□□□□□ -0.09
SKA2-205ENST00000580541 CTAGE8P0CG41 777 aa14.52□□□□□ -0.09
SKA2-205ENST00000580541 TARSP26639 723 aaKnown RBP14.52□□□□□ -0.09
SKA2-205ENST00000580541 CTSOP43234 321 aaPredicted RBP14.52□□□□□ -0.09
SKA2-205ENST00000580541 RPS9P46781 194 aaKnown RBP14.52□□□□□ -0.09
SKA2-205ENST00000580541 CSNK1DP48730 415 aa14.52□□□□□ -0.09
SKA2-205ENST00000580541 TUBB4BP68371 445 aa14.52□□□□□ -0.09
SKA2-205ENST00000580541 SLC10A7Q0GE19 358 aa14.52□□□□□ -0.09
SKA2-205ENST00000580541 MESP2Q0VG99 397 aa14.52□□□□□ -0.09
SKA2-205ENST00000580541 PRPSAP1Q14558 356 aa14.52□□□□□ -0.09
SKA2-205ENST00000580541 OASLQ15646 514 aaKnown RBP14.52□□□□□ -0.09
SKA2-205ENST00000580541 PTPRNQ16849 979 aa14.52□□□□□ -0.09
SKA2-205ENST00000580541 HNRNPA1L2Q32P51 320 aaKnown RBP14.52□□□□□ -0.09
SKA2-205ENST00000580541 CARD16Q5EG05 197 aa14.52□□□□□ -0.09
SKA2-205ENST00000580541 EGFLAMQ63HQ2 1017 aa14.52□□□□□ -0.09
SKA2-205ENST00000580541 SYDE1Q6ZW31 735 aaPredicted RBP14.52□□□□□ -0.09
SKA2-205ENST00000580541 ZNF572Q7Z3I7 529 aaPredicted RBP14.52□□□□□ -0.09
SKA2-205ENST00000580541 CTAGE6Q86UF2 777 aa14.52□□□□□ -0.09
SKA2-205ENST00000580541 CTAGE4Q8IX94 777 aa14.52□□□□□ -0.09
SKA2-205ENST00000580541 SPATA4Q8NEY3 305 aa14.52□□□□□ -0.09
SKA2-205ENST00000580541 FLCNQ8NFG4 579 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms