RNA–Protein interactions for RNA: ENST00000580237.5

NDEL1-208, Transcript of nudE neurodevelopment protein 1 like 1, human

TSL 4

Gene NDEL1, Length 577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NDEL1-208	ENST00000580237	ZSCAN5C	A6NGD5	496 aa	Predicted RBP	11.12	□□□□□ -0.63
NDEL1-208	ENST00000580237	PLK4	O00444	970 aa		11.12	□□□□□ -0.63
NDEL1-208	ENST00000580237	ARHGAP33	O14559	1287 aa		11.12	□□□□□ -0.63
NDEL1-208	ENST00000580237	SLC7A4	O43246	635 aa		11.12	□□□□□ -0.63
NDEL1-208	ENST00000580237	SMAD6	O43541	496 aa	Known RBP	11.12	□□□□□ -0.63
NDEL1-208	ENST00000580237	BUB1	O43683	1085 aa		11.12	□□□□□ -0.63
NDEL1-208	ENST00000580237	AKR1B10	O60218	316 aa		11.12	□□□□□ -0.63
NDEL1-208	ENST00000580237	OPHN1	O60890	802 aa		11.12	□□□□□ -0.63
NDEL1-208	ENST00000580237	MFAP3L	O75121	409 aa		11.12	□□□□□ -0.63
NDEL1-208	ENST00000580237	LRCH4	O75427	683 aa		11.12	□□□□□ -0.63
NDEL1-208	ENST00000580237	MIP	P30301	263 aa		11.12	□□□□□ -0.63
NDEL1-208	ENST00000580237	CHRNA3	P32297	505 aa		11.12	□□□□□ -0.63
NDEL1-208	ENST00000580237	AFF3	P51826	1226 aa	Known RBP	11.12	□□□□□ -0.63
NDEL1-208	ENST00000580237	SLC20A2	Q08357	652 aa		11.12	□□□□□ -0.63
NDEL1-208	ENST00000580237	CCDC15	Q0P6D6	951 aa		11.12	□□□□□ -0.63
NDEL1-208	ENST00000580237	GRIK2	Q13002	908 aa		11.12	□□□□□ -0.63
NDEL1-208	ENST00000580237	PIGH	Q14442	188 aa	Predicted RBP	11.12	□□□□□ -0.63
NDEL1-208	ENST00000580237	SMTNL2	Q2TAL5	461 aa		11.12	□□□□□ -0.63
NDEL1-208	ENST00000580237	PARP15	Q460N3	678 aa		11.12	□□□□□ -0.63
NDEL1-208	ENST00000580237	PPM1J	Q5JR12	505 aa		11.12	□□□□□ -0.63
NDEL1-208	ENST00000580237	ERMARD	Q5T6L9	678 aa		11.12	□□□□□ -0.63
NDEL1-208	ENST00000580237	LEKR1	Q6ZMV7	388 aa		11.12	□□□□□ -0.63
NDEL1-208	ENST00000580237	CNGA4	Q8IV77	575 aa		11.12	□□□□□ -0.63
NDEL1-208	ENST00000580237	MINDY1	Q8N5J2	469 aa		11.12	□□□□□ -0.63
NDEL1-208	ENST00000580237	OR8K1	Q8NGG5	319 aa		11.12	□□□□□ -0.63
NDEL1-208	ENST00000580237	OR2A12	Q8NGT7	310 aa		11.12	□□□□□ -0.63
NDEL1-208	ENST00000580237	DNASE2B	Q8WZ79	361 aa		11.12	□□□□□ -0.63
NDEL1-208	ENST00000580237	ARHGEF2	Q92974	986 aa	Known RBP	11.12	□□□□□ -0.63
NDEL1-208	ENST00000580237	BIRC7	Q96CA5	298 aa		11.12	□□□□□ -0.63
NDEL1-208	ENST00000580237	PEBP4	Q96S96	227 aa		11.12	□□□□□ -0.63
NDEL1-208	ENST00000580237	ZDHHC6	Q9H6R6	413 aa		11.12	□□□□□ -0.63
NDEL1-208	ENST00000580237	ZWILCH	Q9H900	591 aa		11.12	□□□□□ -0.63
NDEL1-208	ENST00000580237	CAPN10	Q9HC96	672 aa		11.12	□□□□□ -0.63
NDEL1-208	ENST00000580237	ABHD10	Q9NUJ1	306 aa		11.12	□□□□□ -0.63
NDEL1-208	ENST00000580237	CTTNBP2NL	Q9P2B4	639 aa		11.12	□□□□□ -0.63
NDEL1-208	ENST00000580237	ARHGAP20	Q9P2F6	1191 aa		11.12	□□□□□ -0.63
NDEL1-208	ENST00000580237	IL36A	Q9UHA7	158 aa		11.12	□□□□□ -0.63
NDEL1-208	ENST00000580237	IP6K2	Q9UHH9	426 aa		11.12	□□□□□ -0.63
NDEL1-208	ENST00000580237	TBC1D3D	A0A087WVF3	549 aa		11.11	□□□□□ -0.63
NDEL1-208	ENST00000580237	TBC1D3I	A0A087WXS9	549 aa		11.11	□□□□□ -0.63
NDEL1-208	ENST00000580237	TBC1D3E	A0A087X179	549 aa		11.11	□□□□□ -0.63
NDEL1-208	ENST00000580237	TBC1D3K	A0A087X1G2	549 aa		11.11	□□□□□ -0.63
NDEL1-208	ENST00000580237	TBC1D3F	A6NER0	549 aa	Predicted RBP	11.11	□□□□□ -0.63
NDEL1-208	ENST00000580237	TBC1D3L	B9A6J9	549 aa		11.11	□□□□□ -0.63
NDEL1-208	ENST00000580237	RASA4B	C9J798	803 aa		11.11	□□□□□ -0.63
NDEL1-208	ENST00000580237		H3BRJ5	948 aa		11.11	□□□□□ -0.63
NDEL1-208	ENST00000580237	RASA4	O43374	803 aa		11.11	□□□□□ -0.63
NDEL1-208	ENST00000580237	ZMPSTE24	O75844	475 aa		11.11	□□□□□ -0.63
NDEL1-208	ENST00000580237	CER1	O95813	267 aa		11.11	□□□□□ -0.63
NDEL1-208	ENST00000580237	TBC1D3H	P0C7X1	549 aa		11.11	□□□□□ -0.63
NDEL1-208	ENST00000580237	C7	P10643	843 aa		11.11	□□□□□ -0.63
NDEL1-208	ENST00000580237	CD27	P26842	260 aa		11.11	□□□□□ -0.63
NDEL1-208	ENST00000580237	DRD3	P35462	400 aa		11.11	□□□□□ -0.63
NDEL1-208	ENST00000580237	GJC1	P36383	396 aa		11.11	□□□□□ -0.63
NDEL1-208	ENST00000580237	ARL4A	P40617	200 aa		11.11	□□□□□ -0.63
NDEL1-208	ENST00000580237	NOVA1	P51513	510 aa	Known RBP	11.11	□□□□□ -0.63
NDEL1-208	ENST00000580237	CCNH	P51946	323 aa	Predicted RBP	11.11	□□□□□ -0.63
NDEL1-208	ENST00000580237	METAP1	P53582	386 aa		11.11	□□□□□ -0.63
NDEL1-208	ENST00000580237	GALC	P54803	685 aa		11.11	□□□□□ -0.63
NDEL1-208	ENST00000580237	YBEY	P58557	167 aa	Predicted RBP	11.11	□□□□□ -0.63
NDEL1-208	ENST00000580237	FOXK2	Q01167	660 aa		11.11	□□□□□ -0.63
NDEL1-208	ENST00000580237	CNTN1	Q12860	1018 aa		11.11	□□□□□ -0.63
NDEL1-208	ENST00000580237	SEMA3B	Q13214	749 aa		11.11	□□□□□ -0.63
NDEL1-208	ENST00000580237	ACAP1	Q15027	740 aa		11.11	□□□□□ -0.63
NDEL1-208	ENST00000580237	TBC1D3G	Q6DHY5	549 aa		11.11	□□□□□ -0.63
NDEL1-208	ENST00000580237	TBC1D3C	Q6IPX1	549 aa		11.11	□□□□□ -0.63
NDEL1-208	ENST00000580237	DPY19L3	Q6ZPD9	716 aa		11.11	□□□□□ -0.63
NDEL1-208	ENST00000580237	RFX8	Q6ZV50	586 aa		11.11	□□□□□ -0.63
NDEL1-208	ENST00000580237	TBC1D3	Q8IZP1	549 aa	Predicted RBP	11.11	□□□□□ -0.63
NDEL1-208	ENST00000580237	CHST14	Q8NCH0	376 aa		11.11	□□□□□ -0.63
NDEL1-208	ENST00000580237	ZNF564	Q8TBZ8	553 aa	Predicted RBP	11.11	□□□□□ -0.63
NDEL1-208	ENST00000580237	HSPH1	Q92598	858 aa		11.11	□□□□□ -0.63
NDEL1-208	ENST00000580237	HMCES	Q96FZ2	354 aa		11.11	□□□□□ -0.63
NDEL1-208	ENST00000580237	GDAP1L1	Q96MZ0	367 aa		11.11	□□□□□ -0.63
NDEL1-208	ENST00000580237	KCTD15	Q96SI1	283 aa	Predicted RBP	11.11	□□□□□ -0.63
NDEL1-208	ENST00000580237	DNAJC7	Q99615	494 aa		11.11	□□□□□ -0.63
NDEL1-208	ENST00000580237	ANP32E	Q9BTT0	268 aa		11.11	□□□□□ -0.63
NDEL1-208	ENST00000580237	ACE2	Q9BYF1	805 aa	Predicted RBP	11.11	□□□□□ -0.63
NDEL1-208	ENST00000580237	ZDHHC5	Q9C0B5	715 aa		11.11	□□□□□ -0.63
NDEL1-208	ENST00000580237	SP110	Q9HB58	689 aa		11.11	□□□□□ -0.63
NDEL1-208	ENST00000580237	AASDHPPT	Q9NRN7	309 aa		11.11	□□□□□ -0.63
NDEL1-208	ENST00000580237	STAU2	Q9NUL3	570 aa	Known RBP eCLIP	11.11	□□□□□ -0.63
NDEL1-208	ENST00000580237	SARDH	Q9UL12	918 aa		11.11	□□□□□ -0.63
NDEL1-208	ENST00000580237	PPM1H	Q9ULR3	514 aa		11.11	□□□□□ -0.63
NDEL1-208	ENST00000580237	TPX2	Q9ULW0	747 aa	Known RBP	11.11	□□□□□ -0.63
NDEL1-208	ENST00000580237	CABIN1	Q9Y6J0	2220 aa		11.11	□□□□□ -0.63
NDEL1-208	ENST00000580237	CACNA1A	O00555	2505 aa		11.1	□□□□□ -0.63
NDEL1-208	ENST00000580237	CXorf51A	A0A1B0GTR3	108 aa		11.1	□□□□□ -0.63
NDEL1-208	ENST00000580237	SSU72P8	A0A1W2PR75	194 aa		11.1	□□□□□ -0.63
NDEL1-208	ENST00000580237	ARHGAP42	A6NI28	874 aa		11.1	□□□□□ -0.63
NDEL1-208	ENST00000580237	MYO1F	O00160	1098 aa		11.1	□□□□□ -0.63
NDEL1-208	ENST00000580237	KRIT1	O00522	736 aa		11.1	□□□□□ -0.63
NDEL1-208	ENST00000580237	PLRG1	O43660	514 aa	Known RBP	11.1	□□□□□ -0.63
NDEL1-208	ENST00000580237	KDELR3	O43731	214 aa		11.1	□□□□□ -0.63
NDEL1-208	ENST00000580237	LEFTY1	O75610	366 aa		11.1	□□□□□ -0.63
NDEL1-208	ENST00000580237	TMCC1	O94876	653 aa		11.1	□□□□□ -0.63
NDEL1-208	ENST00000580237	IGSF6	O95976	241 aa		11.1	□□□□□ -0.63
NDEL1-208	ENST00000580237	CYP1A2	P05177	515 aa		11.1	□□□□□ -0.63
NDEL1-208	ENST00000580237	CTSL	P07711	333 aa		11.1	□□□□□ -0.63
NDEL1-208	ENST00000580237	HNRNPH3	P31942	346 aa	Known RBP	11.1	□□□□□ -0.63

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