RNA–Protein interactions for RNA: ENST00000580061.5

CSNK1D-212, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-212ENST00000580061 CYTH1Q15438 398 aa16.19■□□□□ 0.18
CSNK1D-212ENST00000580061 MARC1Q5VT66 337 aa16.19■□□□□ 0.18
CSNK1D-212ENST00000580061 TTC27Q6P3X3 843 aa16.19■□□□□ 0.18
CSNK1D-212ENST00000580061 METTL3Q86U44 580 aaKnown RBP16.19■□□□□ 0.18
CSNK1D-212ENST00000580061 ZNF513Q8N8E2 541 aaPredicted RBP16.19■□□□□ 0.18
CSNK1D-212ENST00000580061 SPATA4Q8NEY3 305 aa16.19■□□□□ 0.18
CSNK1D-212ENST00000580061 IL12RB2Q99665 862 aa16.19■□□□□ 0.18
CSNK1D-212ENST00000580061 TMEM121Q9BTD3 319 aa16.19■□□□□ 0.18
CSNK1D-212ENST00000580061 FOXQ1Q9C009 403 aa16.19■□□□□ 0.18
CSNK1D-212ENST00000580061 TBC1D17Q9HA65 648 aa16.19■□□□□ 0.18
CSNK1D-212ENST00000580061 USP29Q9HBJ7 922 aa16.19■□□□□ 0.18
CSNK1D-212ENST00000580061 ZDHHC4Q9NPG8 344 aa16.19■□□□□ 0.18
CSNK1D-212ENST00000580061 RBM12Q9NTZ6 932 aaKnown RBP16.19■□□□□ 0.18
CSNK1D-212ENST00000580061 ZNF148Q9UQR1 794 aa16.19■□□□□ 0.18
CSNK1D-212ENST00000580061 DRG1Q9Y295 367 aaKnown RBP16.19■□□□□ 0.18
CSNK1D-212ENST00000580061 FCF1Q9Y324 198 aaKnown RBP16.19■□□□□ 0.18
CSNK1D-212ENST00000580061 MTF2Q9Y483 593 aaPredicted RBP16.19■□□□□ 0.18
CSNK1D-212ENST00000580061 CKAP5Q14008 2032 aa16.19■□□□□ 0.18
CSNK1D-212ENST00000580061 CFAP69A5D8W1 941 aa16.18■□□□□ 0.18
CSNK1D-212ENST00000580061 RNF40O75150 1001 aa16.18■□□□□ 0.18
CSNK1D-212ENST00000580061 PTPN3P26045 913 aa16.18■□□□□ 0.18
CSNK1D-212ENST00000580061 TIE1P35590 1138 aa16.18■□□□□ 0.18
CSNK1D-212ENST00000580061 COILP38432 576 aaPredicted RBP16.18■□□□□ 0.18
CSNK1D-212ENST00000580061 IL12RB1P42701 662 aa16.18■□□□□ 0.18
CSNK1D-212ENST00000580061 RENBPP51606 427 aa16.18■□□□□ 0.18
CSNK1D-212ENST00000580061 WASHC5Q12768 1159 aa16.18■□□□□ 0.18
CSNK1D-212ENST00000580061 ZBTB17Q13105 803 aa16.18■□□□□ 0.18
CSNK1D-212ENST00000580061 FZD5Q13467 585 aa16.18■□□□□ 0.18
CSNK1D-212ENST00000580061 ENPP2Q13822 863 aa16.18■□□□□ 0.18
CSNK1D-212ENST00000580061 LRRC32Q14392 662 aa16.18■□□□□ 0.18
CSNK1D-212ENST00000580061 DGKKQ5KSL6 1271 aa16.18■□□□□ 0.18
CSNK1D-212ENST00000580061 CCDC137Q6PK04 289 aaKnown RBP16.18■□□□□ 0.18
CSNK1D-212ENST00000580061 CCDC26Q8TAB7 109 aa16.18■□□□□ 0.18
CSNK1D-212ENST00000580061 USP33Q8TEY7 942 aa16.18■□□□□ 0.18
CSNK1D-212ENST00000580061 ZNF419Q96HQ0 510 aaPredicted RBP16.18■□□□□ 0.18
CSNK1D-212ENST00000580061 ACOX2Q99424 681 aa16.18■□□□□ 0.18
CSNK1D-212ENST00000580061 FERMT1Q9BQL6 677 aa16.18■□□□□ 0.18
CSNK1D-212ENST00000580061 CEP44Q9C0F1 390 aa16.18■□□□□ 0.18
CSNK1D-212ENST00000580061 DDX47Q9H0S4 455 aaKnown RBP16.18■□□□□ 0.18
CSNK1D-212ENST00000580061 TMEM245Q9H330 911 aa16.18■□□□□ 0.18
CSNK1D-212ENST00000580061 LMAN1LQ9HAT1 526 aa16.18■□□□□ 0.18
CSNK1D-212ENST00000580061 RBM22Q9NW64 420 aaKnown RBP eCLIP16.18■□□□□ 0.181e-8■■■■□ 20.2
CSNK1D-212ENST00000580061 SEPT10Q9P0V9 454 aa16.18■□□□□ 0.18
CSNK1D-212ENST00000580061 SEPT3Q9UH03 358 aa16.18■□□□□ 0.18
CSNK1D-212ENST00000580061 ANKRD36A6QL64 1941 aa16.17■□□□□ 0.18
CSNK1D-212ENST00000580061 FAM170BA6NMN3 283 aa16.17■□□□□ 0.18
CSNK1D-212ENST00000580061 TTC34A8MYJ7 566 aa16.17■□□□□ 0.18
CSNK1D-212ENST00000580061 ZNF821O75541 412 aaPredicted RBP16.17■□□□□ 0.18
CSNK1D-212ENST00000580061 JCHAINP01591 159 aa16.17■□□□□ 0.18
CSNK1D-212ENST00000580061 ALADP13716 330 aa16.17■□□□□ 0.18
CSNK1D-212ENST00000580061 STIP1P31948 543 aaKnown RBP16.17■□□□□ 0.18
CSNK1D-212ENST00000580061 CHRNA3P32297 505 aa16.17■□□□□ 0.18
CSNK1D-212ENST00000580061 MMP13P45452 471 aa16.17■□□□□ 0.18
CSNK1D-212ENST00000580061 FNTAP49354 379 aa16.17■□□□□ 0.18
CSNK1D-212ENST00000580061 GDF10P55107 478 aa16.17■□□□□ 0.18
CSNK1D-212ENST00000580061 DLG2Q15700 870 aa16.17■□□□□ 0.18
CSNK1D-212ENST00000580061 ACCSLQ4AC99 568 aa16.17■□□□□ 0.18
CSNK1D-212ENST00000580061 FNDC3BQ53EP0 1204 aaKnown RBP16.17■□□□□ 0.18
CSNK1D-212ENST00000580061 TEX44Q53QW1 395 aa16.17■□□□□ 0.18
CSNK1D-212ENST00000580061 C2orf27AQ580R0 203 aa16.17■□□□□ 0.18
CSNK1D-212ENST00000580061 FAM182AQ5T1J6 154 aa16.17■□□□□ 0.18
CSNK1D-212ENST00000580061 C22orf39Q6P5X5 142 aa16.17■□□□□ 0.18
CSNK1D-212ENST00000580061 SERPINA13PQ6UXR4 307 aa16.17■□□□□ 0.18
CSNK1D-212ENST00000580061 TRIM67Q6ZTA4 783 aa16.17■□□□□ 0.18
CSNK1D-212ENST00000580061 CHPFQ8IZ52 775 aa16.17■□□□□ 0.18
CSNK1D-212ENST00000580061 BBS5Q8N3I7 341 aa16.17■□□□□ 0.18
CSNK1D-212ENST00000580061 SYNPOQ8N3V7 929 aa16.17■□□□□ 0.18
CSNK1D-212ENST00000580061 CNTD1Q8N815 330 aa16.17■□□□□ 0.18
CSNK1D-212ENST00000580061 FAM71DQ8N9W8 422 aa16.17■□□□□ 0.18
CSNK1D-212ENST00000580061 IL17RCQ8NAC3 791 aa16.17■□□□□ 0.18
CSNK1D-212ENST00000580061 TSEN2Q8NCE0 465 aaKnown RBP16.17■□□□□ 0.18
CSNK1D-212ENST00000580061 PJA1Q8NG27 643 aa16.17■□□□□ 0.18
CSNK1D-212ENST00000580061 ATL2Q8NHH9 583 aa16.17■□□□□ 0.18
CSNK1D-212ENST00000580061 FRS2Q8WU20 508 aa16.17■□□□□ 0.18
CSNK1D-212ENST00000580061 ISG20Q96AZ6 181 aaKnown RBP16.17■□□□□ 0.18
CSNK1D-212ENST00000580061 RTP4Q96DX8 246 aa16.17■□□□□ 0.18
CSNK1D-212ENST00000580061 PSKH2Q96QS6 385 aa16.17■□□□□ 0.18
CSNK1D-212ENST00000580061 VAT1Q99536 393 aa16.17■□□□□ 0.18
CSNK1D-212ENST00000580061 CINPQ9BW66 212 aaPredicted RBP16.17■□□□□ 0.18
CSNK1D-212ENST00000580061 CEP41Q9BYV8 373 aa16.17■□□□□ 0.18
CSNK1D-212ENST00000580061 OSBPL6Q9BZF3 934 aa16.17■□□□□ 0.18
CSNK1D-212ENST00000580061 L2HGDHQ9H9P8 463 aa16.17■□□□□ 0.18
CSNK1D-212ENST00000580061 CACNA2D2Q9NY47 1150 aa16.17■□□□□ 0.18
CSNK1D-212ENST00000580061 LHX3Q9UBR4 397 aa16.17■□□□□ 0.18
CSNK1D-212ENST00000580061 AMACRQ9UHK6 382 aa16.17■□□□□ 0.18
CSNK1D-212ENST00000580061 SLC8A2Q9UPR5 921 aa16.17■□□□□ 0.18
CSNK1D-212ENST00000580061 STON1Q9Y6Q2 735 aa16.17■□□□□ 0.18
CSNK1D-212ENST00000580061 TECTAO75443 2155 aa16.17■□□□□ 0.18
CSNK1D-212ENST00000580061 A0A0C4DFX4 3053 aa16.16■□□□□ 0.18
CSNK1D-212ENST00000580061 C5orf60A6NFR6 353 aa16.16■□□□□ 0.18
CSNK1D-212ENST00000580061 WASH3PC4AMC7 463 aa16.16■□□□□ 0.18
CSNK1D-212ENST00000580061 SGK1O00141 431 aa16.16■□□□□ 0.18
CSNK1D-212ENST00000580061 RNF103O00237 685 aa16.16■□□□□ 0.18
CSNK1D-212ENST00000580061 MUSKO15146 869 aa16.16■□□□□ 0.18
CSNK1D-212ENST00000580061 HLA-DQB2P05538 268 aa16.16■□□□□ 0.18
CSNK1D-212ENST00000580061 PRKCHP24723 683 aa16.16■□□□□ 0.18
CSNK1D-212ENST00000580061 NTSR1P30989 418 aa16.16■□□□□ 0.18
CSNK1D-212ENST00000580061 NRLP54845 237 aa16.16■□□□□ 0.18
CSNK1D-212ENST00000580061 RHOAP61586 193 aa16.16■□□□□ 0.18
CSNK1D-212ENST00000580061 C2orf54Q08AI8 447 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms