RNA–Protein interactions for RNA: ENST00000579640.5

SS18-213, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,840 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-213ENST00000579640 GPR161Q8N6U8 529 aaKnown RBP10.93□□□□□ -0.66
SS18-213ENST00000579640 TERB1Q8NA31 727 aa10.93□□□□□ -0.66
SS18-213ENST00000579640 GLIS1Q8NBF1 620 aa10.93□□□□□ -0.66
SS18-213ENST00000579640 TTC8Q8TAM2 541 aa10.93□□□□□ -0.66
SS18-213ENST00000579640 SEC14L1Q92503 715 aa10.93□□□□□ -0.66
SS18-213ENST00000579640 SNF8Q96H20 258 aa10.93□□□□□ -0.66
SS18-213ENST00000579640 PSKH2Q96QS6 385 aa10.93□□□□□ -0.66
SS18-213ENST00000579640 CINPQ9BW66 212 aaPredicted RBP10.93□□□□□ -0.66
SS18-213ENST00000579640 FAM129AQ9BZQ8 928 aa10.93□□□□□ -0.66
SS18-213ENST00000579640 GBA3Q9H227 469 aa10.93□□□□□ -0.66
SS18-213ENST00000579640 FAM114A2Q9NRY5 505 aa10.93□□□□□ -0.66
SS18-213ENST00000579640 DMGDHQ9UI17 866 aaKnown RBP10.93□□□□□ -0.66
SS18-213ENST00000579640 HS3ST2Q9Y278 367 aa10.93□□□□□ -0.66
SS18-213ENST00000579640 ATP8A1Q9Y2Q0 1164 aa10.93□□□□□ -0.66
SS18-213ENST00000579640 COL4A2P08572 1712 aa10.93□□□□□ -0.66
SS18-213ENST00000579640 GOLGA6CA6NDK9 693 aa10.93□□□□□ -0.66
SS18-213ENST00000579640 GOLGA6BA6NDN3 693 aa10.93□□□□□ -0.66
SS18-213ENST00000579640 SMAPO00193 183 aa10.93□□□□□ -0.66
SS18-213ENST00000579640 CTIFO43310 598 aaKnown RBP10.93□□□□□ -0.66
SS18-213ENST00000579640 APODP05090 189 aa10.93□□□□□ -0.66
SS18-213ENST00000579640 HLA-DQB2P05538 268 aa10.93□□□□□ -0.66
SS18-213ENST00000579640 ASGR2P07307 311 aa10.93□□□□□ -0.66
SS18-213ENST00000579640 SRPRAP08240 638 aaKnown RBP10.93□□□□□ -0.66
SS18-213ENST00000579640 ZSCAN5DPP0CG00 497 aa10.93□□□□□ -0.66
SS18-213ENST00000579640 GOLGA6DP0CG33 693 aa10.93□□□□□ -0.66
SS18-213ENST00000579640 CES1P23141 567 aa10.93□□□□□ -0.66
SS18-213ENST00000579640 NNMTP40261 264 aa10.93□□□□□ -0.66
SS18-213ENST00000579640 GRIA2P42262 883 aa10.93□□□□□ -0.66
SS18-213ENST00000579640 NRLP54845 237 aa10.93□□□□□ -0.66
SS18-213ENST00000579640 ECT2LQ008S8 904 aa10.93□□□□□ -0.66
SS18-213ENST00000579640 ZP2Q05996 745 aa10.93□□□□□ -0.66
SS18-213ENST00000579640 ERCC6LQ2NKX8 1250 aa10.93□□□□□ -0.66
SS18-213ENST00000579640 CNTD1Q8N815 330 aa10.93□□□□□ -0.66
SS18-213ENST00000579640 KDM1BQ8NB78 822 aa10.93□□□□□ -0.66
SS18-213ENST00000579640 USP33Q8TEY7 942 aa10.93□□□□□ -0.66
SS18-213ENST00000579640 UCMAQ8WVF2 138 aa10.93□□□□□ -0.66
SS18-213ENST00000579640 ATXN2LQ8WWM7 1075 aaKnown RBP10.93□□□□□ -0.66
SS18-213ENST00000579640 AGAP3Q96P47 875 aa10.93□□□□□ -0.66
SS18-213ENST00000579640 P2RY13Q9BPV8 354 aa10.93□□□□□ -0.66
SS18-213ENST00000579640 CEP44Q9C0F1 390 aa10.93□□□□□ -0.66
SS18-213ENST00000579640 POLR1EQ9GZS1 481 aaKnown RBP10.93□□□□□ -0.66
SS18-213ENST00000579640 GLOD4Q9HC38 313 aa10.93□□□□□ -0.66
SS18-213ENST00000579640 ELOVL2Q9NXB9 296 aa10.93□□□□□ -0.66
SS18-213ENST00000579640 GOLGA6AQ9NYA3 693 aa10.93□□□□□ -0.66
SS18-213ENST00000579640 WHRNQ9P202 907 aa10.93□□□□□ -0.66
SS18-213ENST00000579640 RSPH14Q9UHP6 348 aa10.93□□□□□ -0.66
SS18-213ENST00000579640 SPECC1L-ADORA2AF8WAN1 911 aa10.92□□□□□ -0.66
SS18-213ENST00000579640 DNALI1O14645 258 aaPredicted RBP10.92□□□□□ -0.66
SS18-213ENST00000579640 TRIM24O15164 1050 aa10.92□□□□□ -0.66
SS18-213ENST00000579640 ZBTB24O43167 697 aaPredicted RBP10.92□□□□□ -0.66
SS18-213ENST00000579640 TMCC1O94876 653 aa10.92□□□□□ -0.66
SS18-213ENST00000579640 KAT7O95251 611 aa10.92□□□□□ -0.66
SS18-213ENST00000579640 CD160O95971 181 aa10.92□□□□□ -0.66
SS18-213ENST00000579640 DLDP09622 509 aaKnown RBP10.92□□□□□ -0.66
SS18-213ENST00000579640 ITIH2P19823 946 aa10.92□□□□□ -0.66
SS18-213ENST00000579640 CTHP32929 405 aa10.92□□□□□ -0.66
SS18-213ENST00000579640 VPS41P49754 854 aa10.92□□□□□ -0.66
SS18-213ENST00000579640 CAV1Q03135 178 aa10.92□□□□□ -0.66
SS18-213ENST00000579640 KDSRQ06136 332 aa10.92□□□□□ -0.66
SS18-213ENST00000579640 CALCOCO2Q13137 446 aa10.92□□□□□ -0.66
SS18-213ENST00000579640 CUL1Q13616 776 aa10.92□□□□□ -0.66
SS18-213ENST00000579640 PRPSAP1Q14558 356 aa10.92□□□□□ -0.66
SS18-213ENST00000579640 RALGPS1Q5JS13 557 aa10.92□□□□□ -0.66
SS18-213ENST00000579640 TMEM215Q68D42 235 aa10.92□□□□□ -0.66
SS18-213ENST00000579640 ALG1LQ6GMV1 187 aa10.92□□□□□ -0.66
SS18-213ENST00000579640 LINGO4Q6UY18 593 aa10.92□□□□□ -0.66
SS18-213ENST00000579640 PRUNE1Q86TP1 453 aa10.92□□□□□ -0.66
SS18-213ENST00000579640 ISG20Q96AZ6 181 aaKnown RBP10.92□□□□□ -0.66
SS18-213ENST00000579640 CHFRQ96EP1 664 aa10.92□□□□□ -0.66
SS18-213ENST00000579640 FCRL5Q96RD9 977 aa10.92□□□□□ -0.66
SS18-213ENST00000579640 MGME1Q9BQP7 344 aa10.92□□□□□ -0.66
SS18-213ENST00000579640 CEP41Q9BYV8 373 aa10.92□□□□□ -0.66
SS18-213ENST00000579640 TRIM31Q9BZY9 425 aa10.92□□□□□ -0.66
SS18-213ENST00000579640 CIPCQ9C0C6 399 aa10.92□□□□□ -0.66
SS18-213ENST00000579640 SLC25A51Q9H1U9 297 aa10.92□□□□□ -0.66
SS18-213ENST00000579640 ANKZF1Q9H8Y5 726 aa10.92□□□□□ -0.66
SS18-213ENST00000579640 EPB41L5Q9HCM4 733 aa10.92□□□□□ -0.66
SS18-213ENST00000579640 NT5MQ9NPB1 228 aa10.92□□□□□ -0.66
SS18-213ENST00000579640 GDF3Q9NR23 364 aa10.92□□□□□ -0.66
SS18-213ENST00000579640 RAB6BQ9NRW1 208 aa10.92□□□□□ -0.66
SS18-213ENST00000579640 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.92□□□□□ -0.66
SS18-213ENST00000579640 TPX2Q9ULW0 747 aaKnown RBP10.92□□□□□ -0.66
SS18-213ENST00000579640 DUSP12Q9UNI6 340 aa10.92□□□□□ -0.66
SS18-213ENST00000579640 SLC8A2Q9UPR5 921 aa10.92□□□□□ -0.66
SS18-213ENST00000579640 ERVW-1Q9UQF0 538 aa10.92□□□□□ -0.66
SS18-213ENST00000579640 SNX24Q9Y343 169 aa10.92□□□□□ -0.66
SS18-213ENST00000579640 PIAS3Q9Y6X2 628 aa10.92□□□□□ -0.66
SS18-213ENST00000579640 V9GYY5 206 aaPredicted RBP10.92□□□□□ -0.66
SS18-213ENST00000579640 MIA3Q5JRA6 1907 aa10.92□□□□□ -0.66
SS18-213ENST00000579640 TBC1D3BA6NDS4 549 aa10.91□□□□□ -0.66
SS18-213ENST00000579640 C19orf67A6NJJ6 358 aa10.91□□□□□ -0.66
SS18-213ENST00000579640 ERI2A8K979 691 aaKnown RBP10.91□□□□□ -0.66
SS18-213ENST00000579640 PSMD3O43242 534 aa10.91□□□□□ -0.66
SS18-213ENST00000579640 ANXA9O76027 345 aa10.91□□□□□ -0.66
SS18-213ENST00000579640 SEC31AO94979 1220 aaKnown RBP10.91□□□□□ -0.66
SS18-213ENST00000579640 NFKB1P19838 968 aa10.91□□□□□ -0.66
SS18-213ENST00000579640 KCNA4P22459 653 aa10.91□□□□□ -0.66
SS18-213ENST00000579640 IVDP26440 423 aa10.91□□□□□ -0.66
SS18-213ENST00000579640 TNFRSF8P28908 595 aa10.91□□□□□ -0.66
SS18-213ENST00000579640 CD68P34810 354 aaPredicted RBP10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms