RNA–Protein interactions for RNA: ENST00000578700.5

SS18-210, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-210ENST00000578700 ATG4AQ8WYN0 398 aa10.44□□□□□ -0.74
SS18-210ENST00000578700 SEC14L1Q92503 715 aa10.44□□□□□ -0.74
SS18-210ENST00000578700 P3H4Q92791 437 aa10.44□□□□□ -0.74
SS18-210ENST00000578700 RNF34Q969K3 372 aa10.44□□□□□ -0.74
SS18-210ENST00000578700 SNF8Q96H20 258 aa10.44□□□□□ -0.74
SS18-210ENST00000578700 FMO2Q99518 471 aa10.44□□□□□ -0.74
SS18-210ENST00000578700 ZNF670Q9BS34 389 aa10.44□□□□□ -0.74
SS18-210ENST00000578700 TRIM51Q9BSJ1 452 aa10.44□□□□□ -0.74
SS18-210ENST00000578700 SNRNP25Q9BV90 132 aaKnown RBP10.44□□□□□ -0.74
SS18-210ENST00000578700 FUT8Q9BYC5 575 aa10.44□□□□□ -0.74
SS18-210ENST00000578700 DHX35Q9H5Z1 703 aaKnown RBP10.44□□□□□ -0.74
SS18-210ENST00000578700 ABCC13Q9NSE7 274 aa10.44□□□□□ -0.74
SS18-210ENST00000578700 ZNF446Q9NWS9 450 aa10.44□□□□□ -0.74
SS18-210ENST00000578700 AP4E1Q9UPM8 1137 aa10.44□□□□□ -0.74
SS18-210ENST00000578700 SYNJ2BP-COX16A0A087WUM0 186 aa10.43□□□□□ -0.74
SS18-210ENST00000578700 ZNF840PA6NDX5 716 aa10.43□□□□□ -0.74
SS18-210ENST00000578700 ZSCAN5CA6NGD5 496 aaPredicted RBP10.43□□□□□ -0.74
SS18-210ENST00000578700 C3orf70A6NLC5 250 aaPredicted RBP10.43□□□□□ -0.74
SS18-210ENST00000578700 YJEFN3A6XGL0 299 aa10.43□□□□□ -0.74
SS18-210ENST00000578700 HHLA1C9JL84 531 aa10.43□□□□□ -0.74
SS18-210ENST00000578700 E7ENQ6 273 aa10.43□□□□□ -0.74
SS18-210ENST00000578700 H3BRJ5 948 aa10.43□□□□□ -0.74
SS18-210ENST00000578700 ARHGAP33O14559 1287 aa10.43□□□□□ -0.74
SS18-210ENST00000578700 ENDOD1O94919 500 aa10.43□□□□□ -0.74
SS18-210ENST00000578700 RTN3O95197 1032 aaPredicted RBP10.43□□□□□ -0.74
SS18-210ENST00000578700 ADH1CP00326 375 aa10.43□□□□□ -0.74
SS18-210ENST00000578700 ITGAVP06756 1048 aa10.43□□□□□ -0.74
SS18-210ENST00000578700 SYPP08247 313 aa10.43□□□□□ -0.74
SS18-210ENST00000578700 SERPINF2P08697 491 aa10.43□□□□□ -0.74
SS18-210ENST00000578700 ITIH2P19823 946 aa10.43□□□□□ -0.74
SS18-210ENST00000578700 TGM2P21980 687 aa10.43□□□□□ -0.74
SS18-210ENST00000578700 ACTN2P35609 894 aa10.43□□□□□ -0.74
SS18-210ENST00000578700 DPP6P42658 865 aa10.43□□□□□ -0.74
SS18-210ENST00000578700 KCNJ1P48048 391 aa10.43□□□□□ -0.74
SS18-210ENST00000578700 ZNF135P52742 658 aaPredicted RBP10.43□□□□□ -0.74
SS18-210ENST00000578700 SLC5A3P53794 718 aa10.43□□□□□ -0.74
SS18-210ENST00000578700 YWHAGP61981 247 aaKnown RBP eCLIP10.43□□□□□ -0.74
SS18-210ENST00000578700 SLC7A9P82251 487 aa10.43□□□□□ -0.74
SS18-210ENST00000578700 TAF10Q12962 218 aa10.43□□□□□ -0.74
SS18-210ENST00000578700 DPYSL3Q14195 570 aa10.43□□□□□ -0.74
SS18-210ENST00000578700 TRIP6Q15654 476 aaKnown RBP10.43□□□□□ -0.74
SS18-210ENST00000578700 TAZQ16635 292 aa10.43□□□□□ -0.74
SS18-210ENST00000578700 COL28A1Q2UY09 1125 aa10.43□□□□□ -0.74
SS18-210ENST00000578700 ANO4Q32M45 955 aa10.43□□□□□ -0.74
SS18-210ENST00000578700 HSF5Q4G112 596 aaPredicted RBP10.43□□□□□ -0.74
SS18-210ENST00000578700 LY6G5CQ5SRR4 150 aa10.43□□□□□ -0.74
SS18-210ENST00000578700 ALS2CLQ60I27 953 aa10.43□□□□□ -0.74
SS18-210ENST00000578700 TRNP1Q6NT89 227 aa10.43□□□□□ -0.74
SS18-210ENST00000578700 SLC36A4Q6YBV0 504 aa10.43□□□□□ -0.74
SS18-210ENST00000578700 PROSER1Q86XN7 944 aa10.43□□□□□ -0.74
SS18-210ENST00000578700 GSPT2Q8IYD1 628 aaKnown RBP10.43□□□□□ -0.74
SS18-210ENST00000578700 KRT222Q8N1A0 295 aa10.43□□□□□ -0.74
SS18-210ENST00000578700 NUP93Q8N1F7 819 aa10.43□□□□□ -0.74
SS18-210ENST00000578700 ZNF513Q8N8E2 541 aaPredicted RBP10.43□□□□□ -0.74
SS18-210ENST00000578700 ZMIZ2Q8NF64 920 aa10.43□□□□□ -0.74
SS18-210ENST00000578700 PKNOX2Q96KN3 472 aa10.43□□□□□ -0.74
SS18-210ENST00000578700 SPATA17Q96L03 361 aa10.43□□□□□ -0.74
SS18-210ENST00000578700 RNF157Q96PX1 679 aa10.43□□□□□ -0.74
SS18-210ENST00000578700 PEBP4Q96S96 227 aa10.43□□□□□ -0.74
SS18-210ENST00000578700 NPY6RQ99463 290 aa10.43□□□□□ -0.74
SS18-210ENST00000578700 PCDH18Q9HCL0 1135 aa10.43□□□□□ -0.74
SS18-210ENST00000578700 COMMD8Q9NX08 183 aa10.43□□□□□ -0.74
SS18-210ENST00000578700 DDIT4Q9NX09 232 aa10.43□□□□□ -0.74
SS18-210ENST00000578700 COX16Q9P0S2 106 aa10.43□□□□□ -0.74
SS18-210ENST00000578700 WHRNQ9P202 907 aa10.43□□□□□ -0.74
SS18-210ENST00000578700 RCOR3Q9P2K3 495 aaPredicted RBP10.43□□□□□ -0.74
SS18-210ENST00000578700 CYP8B1Q9UNU6 501 aa10.43□□□□□ -0.74
SS18-210ENST00000578700 NAALADL1Q9UQQ1 740 aa10.43□□□□□ -0.74
SS18-210ENST00000578700 SSUH2Q9Y2M2 353 aa10.43□□□□□ -0.74
SS18-210ENST00000578700 SNX24Q9Y343 169 aa10.43□□□□□ -0.74
SS18-210ENST00000578700 FLNBO75369 2602 aaKnown RBP10.43□□□□□ -0.74
SS18-210ENST00000578700 CFAP69A5D8W1 941 aa10.42□□□□□ -0.74
SS18-210ENST00000578700 GOLGA6BA6NDN3 693 aa10.42□□□□□ -0.74
SS18-210ENST00000578700 EIF4E1BA6NMX2 242 aaKnown RBP10.42□□□□□ -0.74
SS18-210ENST00000578700 UPK3BL1B0FP48 263 aa10.42□□□□□ -0.74
SS18-210ENST00000578700 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.42□□□□□ -0.74
SS18-210ENST00000578700 UPK3BL2E5RIL1 263 aa10.42□□□□□ -0.74
SS18-210ENST00000578700 HAX1O00165 279 aa10.42□□□□□ -0.74
SS18-210ENST00000578700 TRIM24O15164 1050 aa10.42□□□□□ -0.74
SS18-210ENST00000578700 RRP9O43818 475 aaKnown RBP10.42□□□□□ -0.74
SS18-210ENST00000578700 OPA1O60313 960 aa10.42□□□□□ -0.74
SS18-210ENST00000578700 NDUFS2O75306 463 aa10.42□□□□□ -0.74
SS18-210ENST00000578700 ZIC2O95409 532 aaPredicted RBP10.42□□□□□ -0.74
SS18-210ENST00000578700 KRT14P02533 472 aa10.42□□□□□ -0.74
SS18-210ENST00000578700 MYBL2P10244 700 aa10.42□□□□□ -0.74
SS18-210ENST00000578700 IRF1P10914 325 aa10.42□□□□□ -0.74
SS18-210ENST00000578700 CD59P13987 128 aa10.42□□□□□ -0.74
SS18-210ENST00000578700 HOXB2P14652 356 aa10.42□□□□□ -0.74
SS18-210ENST00000578700 GABRG2P18507 467 aa10.42□□□□□ -0.74
SS18-210ENST00000578700 MAOBP27338 520 aa10.42□□□□□ -0.74
SS18-210ENST00000578700 NR2C2P49116 596 aa10.42□□□□□ -0.74
SS18-210ENST00000578700 PSEN1P49768 467 aa10.42□□□□□ -0.74
SS18-210ENST00000578700 CACNA2D1P54289 1103 aa10.42□□□□□ -0.74
SS18-210ENST00000578700 PLTPP55058 493 aa10.42□□□□□ -0.74
SS18-210ENST00000578700 EIF3EP60228 445 aaKnown RBP10.42□□□□□ -0.74
SS18-210ENST00000578700 OTUD4Q01804 1114 aaKnown RBP10.42□□□□□ -0.74
SS18-210ENST00000578700 GAD2Q05329 585 aa10.42□□□□□ -0.74
SS18-210ENST00000578700 SLMAPQ14BN4 828 aa10.42□□□□□ -0.74
SS18-210ENST00000578700 DPYSL2Q16555 572 aa10.42□□□□□ -0.74
SS18-210ENST00000578700 ZNF423Q2M1K9 1284 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms