RNA–Protein interactions for RNA: ENST00000578199.5

ERBB2-205, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best) BASIC

Gene ERBB2, Length 2,526 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-205ENST00000578199 USP10Q14694 798 aaKnown RBP17.83■□□□□ 0.45
ERBB2-205ENST00000578199 PCSK7Q16549 785 aa17.83■□□□□ 0.45
ERBB2-205ENST00000578199 PDPK2PQ6A1A2 396 aa17.83■□□□□ 0.45
ERBB2-205ENST00000578199 PHTF2Q8N3S3 785 aa17.83■□□□□ 0.45
ERBB2-205ENST00000578199 SH3TC2Q8TF17 1288 aa17.83■□□□□ 0.45
ERBB2-205ENST00000578199 KCTD4Q8WVF5 259 aa17.83■□□□□ 0.45
ERBB2-205ENST00000578199 STMN2Q93045 179 aa17.83■□□□□ 0.45
ERBB2-205ENST00000578199 SUSD3Q96L08 255 aa17.83■□□□□ 0.45
ERBB2-205ENST00000578199 GLOD4Q9HC38 313 aa17.83■□□□□ 0.45
ERBB2-205ENST00000578199 RBM22Q9NW64 420 aaKnown RBP eCLIP17.83■□□□□ 0.454e-7■■■□□ 14.7
ERBB2-205ENST00000578199 HS3ST4Q9Y661 456 aa17.83■□□□□ 0.45
ERBB2-205ENST00000578199 PTPRDP23468 1912 aa17.83■□□□□ 0.45
ERBB2-205ENST00000578199 NYNRINQ9P2P1 1898 aaKnown RBP17.83■□□□□ 0.45
ERBB2-205ENST00000578199 E9PBE3 544 aa17.83■□□□□ 0.44
ERBB2-205ENST00000578199 KLHL41O60662 606 aa17.83■□□□□ 0.44
ERBB2-205ENST00000578199 MAGEC1O60732 1142 aa17.83■□□□□ 0.44
ERBB2-205ENST00000578199 TM7SF2O76062 418 aa17.83■□□□□ 0.44
ERBB2-205ENST00000578199 LMNAP02545 664 aaKnown RBP17.83■□□□□ 0.44
ERBB2-205ENST00000578199 SBK3P0C264 359 aa17.83■□□□□ 0.44
ERBB2-205ENST00000578199 ELNP15502 786 aa17.83■□□□□ 0.44
ERBB2-205ENST00000578199 GRK4P32298 578 aa17.83■□□□□ 0.44
ERBB2-205ENST00000578199 PAPOLAP51003 745 aaKnown RBP17.83■□□□□ 0.44
ERBB2-205ENST00000578199 RAB27AP51159 221 aa17.83■□□□□ 0.44
ERBB2-205ENST00000578199 RAP1GDS1P52306 607 aa17.83■□□□□ 0.44
ERBB2-205ENST00000578199 COG7P83436 770 aa17.83■□□□□ 0.44
ERBB2-205ENST00000578199 SNX30Q5VWJ9 437 aa17.83■□□□□ 0.44
ERBB2-205ENST00000578199 RTN4RL1Q86UN2 441 aaPredicted RBP17.83■□□□□ 0.44
ERBB2-205ENST00000578199 MFSD6LQ8IWD5 586 aa17.83■□□□□ 0.44
ERBB2-205ENST00000578199 TSGA13Q96PP4 275 aa17.83■□□□□ 0.44
ERBB2-205ENST00000578199 HAPLN3Q96S86 360 aa17.83■□□□□ 0.44
ERBB2-205ENST00000578199 GATA5Q9BWX5 397 aaPredicted RBP17.83■□□□□ 0.44
ERBB2-205ENST00000578199 UPF3AQ9H1J1 476 aaKnown RBP17.83■□□□□ 0.44
ERBB2-205ENST00000578199 AAR2Q9Y312 384 aaKnown RBP17.83■□□□□ 0.44
ERBB2-205ENST00000578199 MYLKQ15746 1914 aa17.83■□□□□ 0.44
ERBB2-205ENST00000578199 TTC24A2A3L6 582 aaPredicted RBP17.82■□□□□ 0.44
ERBB2-205ENST00000578199 MATN3O15232 486 aa17.82■□□□□ 0.44
ERBB2-205ENST00000578199 CACNG3O60359 315 aa17.82■□□□□ 0.44
ERBB2-205ENST00000578199 CNGA3Q16281 694 aa17.82■□□□□ 0.44
ERBB2-205ENST00000578199 PKN3Q6P5Z2 889 aa17.82■□□□□ 0.44
ERBB2-205ENST00000578199 RIPOR1Q6ZS17 1223 aa17.82■□□□□ 0.44
ERBB2-205ENST00000578199 TFAP2DQ7Z6R9 452 aa17.82■□□□□ 0.44
ERBB2-205ENST00000578199 LINC00523Q86TU6 105 aa17.82■□□□□ 0.44
ERBB2-205ENST00000578199 RPAINQ86UA6 219 aa17.82■□□□□ 0.44
ERBB2-205ENST00000578199 TMEM151AQ8N4L1 468 aa17.82■□□□□ 0.44
ERBB2-205ENST00000578199 EFCAB3Q8N7B9 438 aa17.82■□□□□ 0.44
ERBB2-205ENST00000578199 NMRK1Q9NWW6 199 aa17.82■□□□□ 0.44
ERBB2-205ENST00000578199 DSEQ9UL01 958 aa17.82■□□□□ 0.44
ERBB2-205ENST00000578199 RUVBL2Q9Y230 463 aaKnown RBP17.82■□□□□ 0.44
ERBB2-205ENST00000578199 PCDHB12Q9Y5F1 795 aa17.82■□□□□ 0.44
ERBB2-205ENST00000578199 GOLGA8QA0A0J9YX86 632 aa17.82■□□□□ 0.44
ERBB2-205ENST00000578199 GOLGA8OA6NCC3 632 aa17.82■□□□□ 0.44
ERBB2-205ENST00000578199 E9PAM4 449 aa17.82■□□□□ 0.44
ERBB2-205ENST00000578199 GOLGA8NF8WBI6 632 aa17.82■□□□□ 0.44
ERBB2-205ENST00000578199 DCXO43602 365 aa17.82■□□□□ 0.44
ERBB2-205ENST00000578199 ARNTP27540 789 aa17.82■□□□□ 0.44
ERBB2-205ENST00000578199 CDK7P50613 346 aa17.82■□□□□ 0.44
ERBB2-205ENST00000578199 ZNF135P52742 658 aaPredicted RBP17.82■□□□□ 0.44
ERBB2-205ENST00000578199 CSE1LP55060 971 aaKnown RBP17.82■□□□□ 0.44
ERBB2-205ENST00000578199 PCID2Q5JVF3 399 aa17.82■□□□□ 0.44
ERBB2-205ENST00000578199 MANEALQ5VSG8 457 aa17.82■□□□□ 0.44
ERBB2-205ENST00000578199 CEP97Q8IW35 865 aa17.82■□□□□ 0.44
ERBB2-205ENST00000578199 ARHGAP24Q8N264 748 aa17.82■□□□□ 0.44
ERBB2-205ENST00000578199 SCYL1Q96KG9 808 aa17.82■□□□□ 0.44
ERBB2-205ENST00000578199 FCRL5Q96RD9 977 aa17.82■□□□□ 0.44
ERBB2-205ENST00000578199 IL12RB2Q99665 862 aa17.82■□□□□ 0.44
ERBB2-205ENST00000578199 GPR22Q99680 433 aa17.82■□□□□ 0.44
ERBB2-205ENST00000578199 C1QTNF1Q9BXJ1 281 aa17.82■□□□□ 0.44
ERBB2-205ENST00000578199 SMOC2Q9H3U7 446 aa17.82■□□□□ 0.44
ERBB2-205ENST00000578199 DNAJC28Q9NX36 388 aa17.82■□□□□ 0.44
ERBB2-205ENST00000578199 STOML1Q9UBI4 398 aa17.82■□□□□ 0.44
ERBB2-205ENST00000578199 TLK1Q9UKI8 766 aa17.82■□□□□ 0.44
ERBB2-205ENST00000578199 PRG3Q9Y2Y8 225 aaPredicted RBP17.82■□□□□ 0.44
ERBB2-205ENST00000578199 KIF1CO43896 1103 aaKnown RBP17.81■□□□□ 0.44
ERBB2-205ENST00000578199 TRIM13O60858 407 aa17.81■□□□□ 0.44
ERBB2-205ENST00000578199 MAXP61244 160 aa17.81■□□□□ 0.44
ERBB2-205ENST00000578199 FRG1Q14331 258 aaKnown RBP17.81■□□□□ 0.44
ERBB2-205ENST00000578199 MUM1Q2TAK8 710 aa17.81■□□□□ 0.44
ERBB2-205ENST00000578199 ANO4Q32M45 955 aa17.81■□□□□ 0.44
ERBB2-205ENST00000578199 ZNF280DQ6N043 979 aa17.81■□□□□ 0.44
ERBB2-205ENST00000578199 SIKE1Q9BRV8 207 aa17.81■□□□□ 0.44
ERBB2-205ENST00000578199 ACE2Q9BYF1 805 aaPredicted RBP17.81■□□□□ 0.44
ERBB2-205ENST00000578199 CATSPERBQ9H7T0 1116 aa17.81■□□□□ 0.44
ERBB2-205ENST00000578199 CYP4F11Q9HBI6 524 aa17.81■□□□□ 0.44
ERBB2-205ENST00000578199 G3BP2Q9UN86 482 aaKnown RBP17.81■□□□□ 0.44
ERBB2-205ENST00000578199 A0A088AWK7 358 aa17.81■□□□□ 0.44
ERBB2-205ENST00000578199 AURKAO14965 403 aa17.81■□□□□ 0.44
ERBB2-205ENST00000578199 ZBTB14O43829 449 aa17.81■□□□□ 0.44
ERBB2-205ENST00000578199 SOAT2O75908 522 aa17.81■□□□□ 0.44
ERBB2-205ENST00000578199 TBX18O95935 607 aa17.81■□□□□ 0.44
ERBB2-205ENST00000578199 SLC35E2BP0CK96 405 aa17.81■□□□□ 0.44
ERBB2-205ENST00000578199 MPSTP25325 297 aa17.81■□□□□ 0.44
ERBB2-205ENST00000578199 USP46P62068 366 aa17.81■□□□□ 0.44
ERBB2-205ENST00000578199 SLC34A1Q06495 639 aa17.81■□□□□ 0.44
ERBB2-205ENST00000578199 SEPT6Q14141 434 aa17.81■□□□□ 0.44
ERBB2-205ENST00000578199 MAPRE1Q15691 268 aaKnown RBP17.81■□□□□ 0.44
ERBB2-205ENST00000578199 CFAP157Q5JU67 520 aa17.81■□□□□ 0.44
ERBB2-205ENST00000578199 BRMS1LQ5PSV4 323 aa17.81■□□□□ 0.44
ERBB2-205ENST00000578199 ZNF598Q86UK7 904 aaKnown RBP17.81■□□□□ 0.44
ERBB2-205ENST00000578199 SCML4Q8N228 414 aa17.81■□□□□ 0.44
ERBB2-205ENST00000578199 TTC9BQ8N6N2 239 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms