RNA–Protein interactions for RNA: ENST00000577978.1

DDX42-205, Transcript of DEAD-box helicase 42, humanhuman

TSL 5

Gene DDX42, Length 581 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX42-205ENST00000577978 ZSWIM8A7E2V4 1837 aa3.84□□□□□ -1.8
DDX42-205ENST00000577978 CYP2D7A0A087X1C5 515 aa3.83□□□□□ -1.8
DDX42-205ENST00000577978 A1L4Q6 167 aa3.83□□□□□ -1.8
DDX42-205ENST00000577978 ENO4A6NNW6 628 aa3.83□□□□□ -1.8
DDX42-205ENST00000577978 HMGB1P1B2RPK0 211 aaPredicted RBP3.83□□□□□ -1.8
DDX42-205ENST00000577978 TMEM232C9JQI7 657 aa3.83□□□□□ -1.8
DDX42-205ENST00000577978 E7ENQ6 273 aa3.83□□□□□ -1.8
DDX42-205ENST00000577978 H7C1Q1 480 aa3.83□□□□□ -1.8
DDX42-205ENST00000577978 PPIP5K2O43314 1243 aa3.83□□□□□ -1.8
DDX42-205ENST00000577978 PRC1O43663 620 aa3.83□□□□□ -1.8
DDX42-205ENST00000577978 HSF2BPO75031 334 aa3.83□□□□□ -1.8
DDX42-205ENST00000577978 ALDH1L1O75891 902 aa3.83□□□□□ -1.8
DDX42-205ENST00000577978 ABLIM3O94929 683 aa3.83□□□□□ -1.8
DDX42-205ENST00000577978 TOP3BO95985 862 aaKnown RBP3.83□□□□□ -1.8
DDX42-205ENST00000577978 THP07101 528 aa3.83□□□□□ -1.8
DDX42-205ENST00000577978 LINGO3P0C6S8 592 aa3.83□□□□□ -1.8
DDX42-205ENST00000577978 NHLRC4P0CG21 123 aaPredicted RBP3.83□□□□□ -1.8
DDX42-205ENST00000577978 PF4V1P10720 104 aa3.83□□□□□ -1.8
DDX42-205ENST00000577978 CCL5P13501 91 aa3.83□□□□□ -1.8
DDX42-205ENST00000577978 CPA1P15085 419 aa3.83□□□□□ -1.8
DDX42-205ENST00000577978 NPR1P16066 1061 aa3.83□□□□□ -1.8
DDX42-205ENST00000577978 PRLRP16471 622 aa3.83□□□□□ -1.8
DDX42-205ENST00000577978 ENGP17813 658 aa3.83□□□□□ -1.8
DDX42-205ENST00000577978 LRPAP1P30533 357 aa3.83□□□□□ -1.8
DDX42-205ENST00000577978 MDH1P40925 334 aaKnown RBP3.83□□□□□ -1.8
DDX42-205ENST00000577978 PSMC4P43686 418 aa3.83□□□□□ -1.8
DDX42-205ENST00000577978 NDUFA8P51970 172 aa3.83□□□□□ -1.8
DDX42-205ENST00000577978 SH3BGRP55822 239 aaPredicted RBP3.83□□□□□ -1.8
DDX42-205ENST00000577978 WNT3P56703 355 aa3.83□□□□□ -1.8
DDX42-205ENST00000577978 SP2Q02086 613 aa3.83□□□□□ -1.8
DDX42-205ENST00000577978 DEUP1Q05D60 604 aa3.83□□□□□ -1.8
DDX42-205ENST00000577978 PDCLQ13371 301 aa3.83□□□□□ -1.8
DDX42-205ENST00000577978 MTX1Q13505 466 aa3.83□□□□□ -1.8
DDX42-205ENST00000577978 CUL3Q13618 768 aa3.83□□□□□ -1.8
DDX42-205ENST00000577978 TRIM14Q14142 442 aa3.83□□□□□ -1.8
DDX42-205ENST00000577978 KARSQ15046 597 aaKnown RBP3.83□□□□□ -1.8
DDX42-205ENST00000577978 LRRC23Q53EV4 343 aaPredicted RBP3.83□□□□□ -1.8
DDX42-205ENST00000577978 TTMPQ5BVD1 217 aa3.83□□□□□ -1.8
DDX42-205ENST00000577978 SPECC1Q5M775 1068 aa3.83□□□□□ -1.8
DDX42-205ENST00000577978 NUGGCQ68CJ6 796 aa3.83□□□□□ -1.8
DDX42-205ENST00000577978 LRIG3Q6UXM1 1119 aa3.83□□□□□ -1.8
DDX42-205ENST00000577978 RAD9BQ6WBX8 426 aa3.83□□□□□ -1.8
DDX42-205ENST00000577978 LURAP1LQ8IV03 231 aa3.83□□□□□ -1.8
DDX42-205ENST00000577978 CNGA4Q8IV77 575 aa3.83□□□□□ -1.8
DDX42-205ENST00000577978 GRAMD1CQ8IYS0 662 aa3.83□□□□□ -1.8
DDX42-205ENST00000577978 IQCKQ8N0W5 287 aa3.83□□□□□ -1.8
DDX42-205ENST00000577978 FAM177A1Q8N128 213 aaPredicted RBP3.83□□□□□ -1.8
DDX42-205ENST00000577978 LRRC71Q8N4P6 559 aa3.83□□□□□ -1.8
DDX42-205ENST00000577978 EIF1ADQ8N9N8 165 aaKnown RBP3.83□□□□□ -1.8
DDX42-205ENST00000577978 TRIML1Q8N9V2 468 aa3.83□□□□□ -1.8
DDX42-205ENST00000577978 PNLDC1Q8NA58 520 aaKnown RBP3.83□□□□□ -1.8
DDX42-205ENST00000577978 CNBD1Q8NA66 436 aa3.83□□□□□ -1.8
DDX42-205ENST00000577978 MLKLQ8NB16 471 aa3.83□□□□□ -1.8
DDX42-205ENST00000577978 SMCR8Q8TEV9 937 aaPredicted RBP3.83□□□□□ -1.8
DDX42-205ENST00000577978 NSMCE1Q8WV22 266 aa3.83□□□□□ -1.8
DDX42-205ENST00000577978 CCT6BQ92526 530 aa3.83□□□□□ -1.8
DDX42-205ENST00000577978 GLG1Q92896 1179 aa3.83□□□□□ -1.8
DDX42-205ENST00000577978 PPP1R14BQ96C90 147 aa3.83□□□□□ -1.8
DDX42-205ENST00000577978 EVI5LQ96CN4 794 aa3.83□□□□□ -1.8
DDX42-205ENST00000577978 RBM41Q96IZ5 413 aaKnown RBP3.83□□□□□ -1.8
DDX42-205ENST00000577978 MRGPRX1Q96LB2 322 aa3.83□□□□□ -1.8
DDX42-205ENST00000577978 AGAP3Q96P47 875 aa3.83□□□□□ -1.8
DDX42-205ENST00000577978 TRAPPC9Q96Q05 1148 aa3.83□□□□□ -1.8
DDX42-205ENST00000577978 TSC22D3Q99576 134 aa3.83□□□□□ -1.8
DDX42-205ENST00000577978 SH2D3AQ9BRG2 576 aa3.83□□□□□ -1.8
DDX42-205ENST00000577978 LZTS2Q9BRK4 669 aa3.83□□□□□ -1.8
DDX42-205ENST00000577978 NUP58Q9BVL2 599 aa3.83□□□□□ -1.8
DDX42-205ENST00000577978 AGXT2Q9BYV1 514 aa3.83□□□□□ -1.8
DDX42-205ENST00000577978 TSGA10Q9BZW7 698 aa3.83□□□□□ -1.8
DDX42-205ENST00000577978 IQCGQ9H095 443 aaKnown RBP3.83□□□□□ -1.8
DDX42-205ENST00000577978 VPS16Q9H269 839 aa3.83□□□□□ -1.8
DDX42-205ENST00000577978 NDST4Q9H3R1 872 aa3.83□□□□□ -1.8
DDX42-205ENST00000577978 HAUS4Q9H6D7 363 aa3.83□□□□□ -1.8
DDX42-205ENST00000577978 PRDM16Q9HAZ2 1276 aa3.83□□□□□ -1.8
DDX42-205ENST00000577978 KCNMB3Q9NPA1 279 aa3.83□□□□□ -1.8
DDX42-205ENST00000577978 PAPOLBQ9NRJ5 636 aaKnown RBP3.83□□□□□ -1.8
DDX42-205ENST00000577978 TYW1Q9NV66 732 aaKnown RBP3.83□□□□□ -1.8
DDX42-205ENST00000577978 ELOVL5Q9NYP7 299 aa3.83□□□□□ -1.8
DDX42-205ENST00000577978 IP6K2Q9UHH9 426 aa3.83□□□□□ -1.8
DDX42-205ENST00000577978 GABRQQ9UN88 632 aa3.83□□□□□ -1.8
DDX42-205ENST00000577978 ADAMTS5Q9UNA0 930 aa3.83□□□□□ -1.8
DDX42-205ENST00000577978 RIPOR2Q9Y4F9 1068 aa3.83□□□□□ -1.8
DDX42-205ENST00000577978 NCAPD2Q15021 1401 aa3.83□□□□□ -1.8
DDX42-205ENST00000577978 ASPMQ8IZT6 3477 aa3.83□□□□□ -1.8
DDX42-205ENST00000577978 DMDP11532 3685 aa3.82□□□□□ -1.8
DDX42-205ENST00000577978 GCN1Q92616 2671 aaKnown RBP3.82□□□□□ -1.8
DDX42-205ENST00000577978 USP9XQ93008 2570 aaPredicted RBP3.82□□□□□ -1.8
DDX42-205ENST00000577978 TAF1P21675 1872 aa3.82□□□□□ -1.8
DDX42-205ENST00000577978 ABCC12Q96J65 1359 aa3.82□□□□□ -1.8
DDX42-205ENST00000577978 ZMYM6O95789 1325 aa3.82□□□□□ -1.8
DDX42-205ENST00000577978 A0A088AWK7 358 aa3.82□□□□□ -1.8
DDX42-205ENST00000577978 PNMA6EA0A0J9YXQ4 647 aa3.82□□□□□ -1.8
DDX42-205ENST00000577978 GOLGA6L10A0A0M3HER8 536 aa3.82□□□□□ -1.8
DDX42-205ENST00000577978 A0A1B0GVL5 298 aa3.82□□□□□ -1.8
DDX42-205ENST00000577978 SMIM35A0A1B0GVV1 85 aa3.82□□□□□ -1.8
DDX42-205ENST00000577978 GMNCA6NCL1 334 aa3.82□□□□□ -1.8
DDX42-205ENST00000577978 DNM1LO00429 736 aa3.82□□□□□ -1.8
DDX42-205ENST00000577978 IFIT3O14879 490 aaKnown RBP3.82□□□□□ -1.8
DDX42-205ENST00000577978 SPTLC2O15270 562 aa3.82□□□□□ -1.8
DDX42-205ENST00000577978 PRPF3O43395 683 aaKnown RBP3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms