RNA–Protein interactions for RNA: ENST00000577901.5

VAPA-204, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 917 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-204ENST00000577901 ITGAVP06756 1048 aa16.41■□□□□ 0.22
VAPA-204ENST00000577901 MYBL1P10243 752 aa16.41■□□□□ 0.22
VAPA-204ENST00000577901 GOT1P17174 413 aa16.41■□□□□ 0.22
VAPA-204ENST00000577901 CD38P28907 300 aa16.41■□□□□ 0.22
VAPA-204ENST00000577901 PSMD8P48556 350 aa16.41■□□□□ 0.22
VAPA-204ENST00000577901 CCR5P51681 352 aa16.41■□□□□ 0.22
VAPA-204ENST00000577901 ZNF143P52747 638 aaPredicted RBP16.41■□□□□ 0.22
VAPA-204ENST00000577901 CDH4P55283 916 aa16.41■□□□□ 0.22
VAPA-204ENST00000577901 ECT2LQ008S8 904 aa16.41■□□□□ 0.22
VAPA-204ENST00000577901 SHBQ15464 509 aa16.41■□□□□ 0.22
VAPA-204ENST00000577901 TSR1Q2NL82 804 aaKnown RBP16.41■□□□□ 0.22
VAPA-204ENST00000577901 C5orf22Q49AR2 442 aa16.41■□□□□ 0.22
VAPA-204ENST00000577901 PPP1R15BQ5SWA1 713 aa16.41■□□□□ 0.22
VAPA-204ENST00000577901 RNF219Q5W0B1 726 aaPredicted RBP16.41■□□□□ 0.22
VAPA-204ENST00000577901 HGSNATQ68CP4 663 aa16.41■□□□□ 0.22
VAPA-204ENST00000577901 C14orf80Q86SX3 495 aa16.41■□□□□ 0.22
VAPA-204ENST00000577901 DRC7Q8IY82 874 aa16.41■□□□□ 0.22
VAPA-204ENST00000577901 AADATQ8N5Z0 425 aa16.41■□□□□ 0.22
VAPA-204ENST00000577901 FAM172AQ8WUF8 416 aa16.41■□□□□ 0.22
VAPA-204ENST00000577901 CENPIQ92674 756 aaPredicted RBP16.41■□□□□ 0.22
VAPA-204ENST00000577901 CNDP2Q96KP4 475 aaKnown RBP16.41■□□□□ 0.22
VAPA-204ENST00000577901 MCEEQ96PE7 176 aa16.41■□□□□ 0.22
VAPA-204ENST00000577901 BBC3Q96PG8 261 aaPredicted RBP16.41■□□□□ 0.22
VAPA-204ENST00000577901 FAM129BQ96TA1 746 aa16.41■□□□□ 0.22
VAPA-204ENST00000577901 GDF3Q9NR23 364 aa16.41■□□□□ 0.22
VAPA-204ENST00000577901 SLCO3A1Q9UIG8 710 aa16.41■□□□□ 0.22
VAPA-204ENST00000577901 PCDHGA1Q9Y5H4 931 aa16.41■□□□□ 0.22
VAPA-204ENST00000577901 PLXNA2O75051 1894 aa16.41■□□□□ 0.22
VAPA-204ENST00000577901 FASNP49327 2511 aaKnown RBP16.4■□□□□ 0.22
VAPA-204ENST00000577901 A0A1W2PR77 199 aa16.4■□□□□ 0.22
VAPA-204ENST00000577901 C10orf142B7Z368 130 aa16.4■□□□□ 0.22
VAPA-204ENST00000577901 CBX4O00257 560 aa16.4■□□□□ 0.22
VAPA-204ENST00000577901 PLK4O00444 970 aa16.4■□□□□ 0.22
VAPA-204ENST00000577901 WNT9AO14904 365 aa16.4■□□□□ 0.22
VAPA-204ENST00000577901 SRGAP2O75044 1071 aa16.4■□□□□ 0.22
VAPA-204ENST00000577901 ADRA1BP35368 520 aa16.4■□□□□ 0.22
VAPA-204ENST00000577901 GGCXP38435 758 aa16.4■□□□□ 0.22
VAPA-204ENST00000577901 ADPRHP54922 357 aa16.4■□□□□ 0.22
VAPA-204ENST00000577901 RPL7AP62424 266 aaKnown RBP16.4■□□□□ 0.22
VAPA-204ENST00000577901 MAMLD1Q13495 774 aa16.4■□□□□ 0.22
VAPA-204ENST00000577901 PLEKHA7Q6IQ23 1121 aa16.4■□□□□ 0.22
VAPA-204ENST00000577901 CIR1Q86X95 450 aaPredicted RBP16.4■□□□□ 0.22
VAPA-204ENST00000577901 VSTM4Q8IW00 320 aa16.4■□□□□ 0.22
VAPA-204ENST00000577901 APCDD1Q8J025 514 aa16.4■□□□□ 0.22
VAPA-204ENST00000577901 STK40Q8N2I9 435 aa16.4■□□□□ 0.22
VAPA-204ENST00000577901 SPDYE1Q8NFV5 336 aaPredicted RBP16.4■□□□□ 0.22
VAPA-204ENST00000577901 OR8K1Q8NGG5 319 aa16.4■□□□□ 0.22
VAPA-204ENST00000577901 SAP25Q8TEE9 199 aa16.4■□□□□ 0.22
VAPA-204ENST00000577901 RPL10LQ96L21 214 aaKnown RBP16.4■□□□□ 0.22
VAPA-204ENST00000577901 CNPY3Q9BT09 278 aa16.4■□□□□ 0.22
VAPA-204ENST00000577901 ISCUQ9H1K1 167 aa16.4■□□□□ 0.22
VAPA-204ENST00000577901 MRPL47Q9HD33 250 aaKnown RBP16.4■□□□□ 0.22
VAPA-204ENST00000577901 ZNHIT6Q9NWK9 470 aaKnown RBP16.4■□□□□ 0.22
VAPA-204ENST00000577901 CNOT8Q9UFF9 292 aaKnown RBP16.4■□□□□ 0.22
VAPA-204ENST00000577901 COL5A1P20908 1838 aaPredicted RBP16.4■□□□□ 0.22
VAPA-204ENST00000577901 APC2O95996 2303 aa16.39■□□□□ 0.21
VAPA-204ENST00000577901 DRGXA6NNA5 263 aa16.39■□□□□ 0.21
VAPA-204ENST00000577901 I6L893 689 aaPredicted RBP16.39■□□□□ 0.21
VAPA-204ENST00000577901 YKT6O15498 198 aa16.39■□□□□ 0.21
VAPA-204ENST00000577901 RFPL3O75679 317 aa16.39■□□□□ 0.21
VAPA-204ENST00000577901 ADH1BP00325 375 aa16.39■□□□□ 0.21
VAPA-204ENST00000577901 JUPP14923 745 aa16.39■□□□□ 0.21
VAPA-204ENST00000577901 C5AR1P21730 350 aa16.39■□□□□ 0.21
VAPA-204ENST00000577901 HNRNPH3P31942 346 aaKnown RBP16.39■□□□□ 0.21
VAPA-204ENST00000577901 HDAC4P56524 1084 aa16.39■□□□□ 0.21
VAPA-204ENST00000577901 SULT2A1Q06520 285 aa16.39■□□□□ 0.21
VAPA-204ENST00000577901 DNAJC3Q13217 504 aa16.39■□□□□ 0.21
VAPA-204ENST00000577901 SCYL2Q6P3W7 929 aa16.39■□□□□ 0.21
VAPA-204ENST00000577901 SARM1Q6SZW1 724 aa16.39■□□□□ 0.21
VAPA-204ENST00000577901 SLFN11Q7Z7L1 901 aa16.39■□□□□ 0.21
VAPA-204ENST00000577901 EID2Q8N6I1 236 aa16.39■□□□□ 0.21
VAPA-204ENST00000577901 OR14C36Q8NHC7 312 aa16.39■□□□□ 0.21
VAPA-204ENST00000577901 PTPRN2Q92932 1015 aa16.39■□□□□ 0.21
VAPA-204ENST00000577901 ZNF653Q96CK0 615 aa16.39■□□□□ 0.21
VAPA-204ENST00000577901 CRELD1Q96HD1 420 aa16.39■□□□□ 0.21
VAPA-204ENST00000577901 SERAC1Q96JX3 654 aa16.39■□□□□ 0.21
VAPA-204ENST00000577901 TRIM5Q9C035 493 aa16.39■□□□□ 0.21
VAPA-204ENST00000577901 OSBPL2Q9H1P3 480 aa16.39■□□□□ 0.21
VAPA-204ENST00000577901 TMPRSS4Q9NRS4 437 aa16.39■□□□□ 0.21
VAPA-204ENST00000577901 TPX2Q9ULW0 747 aaKnown RBP16.39■□□□□ 0.21
VAPA-204ENST00000577901 SNX10Q9Y5X0 201 aa16.39■□□□□ 0.21
VAPA-204ENST00000577901 SCINQ9Y6U3 715 aa16.39■□□□□ 0.21
VAPA-204ENST00000577901 IGLV3-10A0A075B6K4 115 aa16.38■□□□□ 0.21
VAPA-204ENST00000577901 EIF4E1BA6NMX2 242 aaKnown RBP16.38■□□□□ 0.21
VAPA-204ENST00000577901 TLR4O00206 839 aa16.38■□□□□ 0.21
VAPA-204ENST00000577901 CCP110O43303 1012 aa16.38■□□□□ 0.21
VAPA-204ENST00000577901 IL1BP01584 269 aa16.38■□□□□ 0.21
VAPA-204ENST00000577901 PLEKP08567 350 aaPredicted RBP16.38■□□□□ 0.21
VAPA-204ENST00000577901 C1SP09871 688 aa16.38■□□□□ 0.21
VAPA-204ENST00000577901 CDK4P11802 303 aa16.38■□□□□ 0.21
VAPA-204ENST00000577901 MZF1P28698 734 aaPredicted RBP16.38■□□□□ 0.21
VAPA-204ENST00000577901 HNF1BP35680 557 aa16.38■□□□□ 0.21
VAPA-204ENST00000577901 NNMTP40261 264 aa16.38■□□□□ 0.21
VAPA-204ENST00000577901 ARRB1P49407 418 aaPredicted RBP16.38■□□□□ 0.21
VAPA-204ENST00000577901 ACADVLP49748 655 aa16.38■□□□□ 0.21
VAPA-204ENST00000577901 STK19P49842 368 aaPredicted RBP16.38■□□□□ 0.21
VAPA-204ENST00000577901 PLK1P53350 603 aa16.38■□□□□ 0.21
VAPA-204ENST00000577901 CLDN6P56747 220 aa16.38■□□□□ 0.21
VAPA-204ENST00000577901 NXPH1P58417 271 aa16.38■□□□□ 0.21
VAPA-204ENST00000577901 ELAVL3Q14576 367 aaKnown RBP16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms