RNA–Protein interactions for RNA: ENST00000577725.1

CRLF3-202, Transcript of cytokine receptor like factor 3, humanhuman

TSL 5

Gene CRLF3, Length 613 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-202ENST00000577725 RTL10Q7L3V2 364 aa10.3□□□□□ -0.76
CRLF3-202ENST00000577725 NLRP14Q86W24 1093 aa10.3□□□□□ -0.76
CRLF3-202ENST00000577725 LONP2Q86WA8 852 aa10.3□□□□□ -0.76
CRLF3-202ENST00000577725 ARHGAP12Q8IWW6 846 aa10.3□□□□□ -0.76
CRLF3-202ENST00000577725 RTL3Q8N8U3 475 aaKnown RBP10.3□□□□□ -0.76
CRLF3-202ENST00000577725 CCNYQ8ND76 341 aa10.3□□□□□ -0.76
CRLF3-202ENST00000577725 SH3RF2Q8TEC5 729 aa10.3□□□□□ -0.76
CRLF3-202ENST00000577725 USP33Q8TEY7 942 aa10.3□□□□□ -0.76
CRLF3-202ENST00000577725 SLCO2A1Q92959 643 aa10.3□□□□□ -0.76
CRLF3-202ENST00000577725 LOXL4Q96JB6 756 aa10.3□□□□□ -0.76
CRLF3-202ENST00000577725 GDAP1L1Q96MZ0 367 aa10.3□□□□□ -0.76
CRLF3-202ENST00000577725 CEP41Q9BYV8 373 aa10.3□□□□□ -0.76
CRLF3-202ENST00000577725 ZYG11BQ9C0D3 744 aa10.3□□□□□ -0.76
CRLF3-202ENST00000577725 SLC39A8Q9C0K1 460 aa10.3□□□□□ -0.76
CRLF3-202ENST00000577725 RAB17Q9H0T7 212 aa10.3□□□□□ -0.76
CRLF3-202ENST00000577725 TASP1Q9H6P5 420 aa10.3□□□□□ -0.76
CRLF3-202ENST00000577725 NOL6Q9H6R4 1146 aaKnown RBP10.3□□□□□ -0.76
CRLF3-202ENST00000577725 CATSPERBQ9H7T0 1116 aa10.3□□□□□ -0.76
CRLF3-202ENST00000577725 USP29Q9HBJ7 922 aa10.3□□□□□ -0.76
CRLF3-202ENST00000577725 GRHL1Q9NZI5 618 aa10.3□□□□□ -0.76
CRLF3-202ENST00000577725 SH3BP1Q9Y3L3 701 aa10.3□□□□□ -0.76
CRLF3-202ENST00000577725 MYOFQ9NZM1 2061 aa10.3□□□□□ -0.76
CRLF3-202ENST00000577725 MYO18AQ92614 2054 aaKnown RBP10.29□□□□□ -0.76
CRLF3-202ENST00000577725 TENM4Q6N022 2769 aa10.29□□□□□ -0.76
CRLF3-202ENST00000577725 IGLV3-10A0A075B6K4 115 aa10.29□□□□□ -0.76
CRLF3-202ENST00000577725 BCLAF3A2AJT9 711 aaKnown RBP10.29□□□□□ -0.76
CRLF3-202ENST00000577725 WASH4PA8MWX3 477 aa10.29□□□□□ -0.76
CRLF3-202ENST00000577725 CHURC1-FNTBB4DL54 471 aa10.29□□□□□ -0.76
CRLF3-202ENST00000577725 HYAL3O43820 417 aaPredicted RBP10.29□□□□□ -0.76
CRLF3-202ENST00000577725 FGF19O95750 216 aa10.29□□□□□ -0.76
CRLF3-202ENST00000577725 CAPNS1P04632 268 aa10.29□□□□□ -0.76
CRLF3-202ENST00000577725 POU2F2P09086 479 aa10.29□□□□□ -0.76
CRLF3-202ENST00000577725 FAM153BP0C7A2 387 aa10.29□□□□□ -0.76
CRLF3-202ENST00000577725 DDX6P26196 483 aaKnown RBP eCLIP10.29□□□□□ -0.76
CRLF3-202ENST00000577725 IVDP26440 423 aa10.29□□□□□ -0.76
CRLF3-202ENST00000577725 ECHS1P30084 290 aa10.29□□□□□ -0.76
CRLF3-202ENST00000577725 HTR7P34969 479 aa10.29□□□□□ -0.76
CRLF3-202ENST00000577725 NR2C2P49116 596 aa10.29□□□□□ -0.76
CRLF3-202ENST00000577725 FNTBP49356 437 aa10.29□□□□□ -0.76
CRLF3-202ENST00000577725 GALNT2Q10471 571 aa10.29□□□□□ -0.76
CRLF3-202ENST00000577725 GPS1Q13098 491 aa10.29□□□□□ -0.76
CRLF3-202ENST00000577725 BRD3Q15059 726 aa10.29□□□□□ -0.76
CRLF3-202ENST00000577725 PDK1Q15118 436 aa10.29□□□□□ -0.76
CRLF3-202ENST00000577725 PRKD1Q15139 912 aaPredicted RBP10.29□□□□□ -0.76
CRLF3-202ENST00000577725 FAM153CQ494X1 144 aa10.29□□□□□ -0.76
CRLF3-202ENST00000577725 IZUMO3Q5VZ72 239 aa10.29□□□□□ -0.76
CRLF3-202ENST00000577725 KIAA1211LQ6NV74 962 aa10.29□□□□□ -0.76
CRLF3-202ENST00000577725 ZDHHC24Q6UX98 284 aa10.29□□□□□ -0.76
CRLF3-202ENST00000577725 Q6ZNB5 142 aa10.29□□□□□ -0.76
CRLF3-202ENST00000577725 SYDE1Q6ZW31 735 aaPredicted RBP10.29□□□□□ -0.76
CRLF3-202ENST00000577725 BBS7Q8IWZ6 715 aa10.29□□□□□ -0.76
CRLF3-202ENST00000577725 CMTM8Q8IZV2 173 aa10.29□□□□□ -0.76
CRLF3-202ENST00000577725 CCDC89Q8N998 374 aa10.29□□□□□ -0.76
CRLF3-202ENST00000577725 CCDC110Q8TBZ0 833 aa10.29□□□□□ -0.76
CRLF3-202ENST00000577725 TFB1MQ8WVM0 346 aaKnown RBP10.29□□□□□ -0.76
CRLF3-202ENST00000577725 USP13Q92995 863 aaPredicted RBP10.29□□□□□ -0.76
CRLF3-202ENST00000577725 BHMTQ93088 406 aa10.29□□□□□ -0.76
CRLF3-202ENST00000577725 ZBTB9Q96C00 473 aa10.29□□□□□ -0.76
CRLF3-202ENST00000577725 HMCESQ96FZ2 354 aa10.29□□□□□ -0.76
CRLF3-202ENST00000577725 P2RY11Q96G91 374 aa10.29□□□□□ -0.76
CRLF3-202ENST00000577725 PRDM16Q9HAZ2 1276 aa10.29□□□□□ -0.76
CRLF3-202ENST00000577725 PCDH9Q9HC56 1237 aa10.29□□□□□ -0.76
CRLF3-202ENST00000577725 FAM114A2Q9NRY5 505 aa10.29□□□□□ -0.76
CRLF3-202ENST00000577725 TMEM51Q9NW97 253 aa10.29□□□□□ -0.76
CRLF3-202ENST00000577725 TMEM248Q9NWD8 314 aa10.29□□□□□ -0.76
CRLF3-202ENST00000577725 PPARGC1AQ9UBK2 798 aaKnown RBP10.29□□□□□ -0.76
CRLF3-202ENST00000577725 FAM153AQ9UHL3 310 aa10.29□□□□□ -0.76
CRLF3-202ENST00000577725 LSM7Q9UK45 103 aaKnown RBP10.29□□□□□ -0.76
CRLF3-202ENST00000577725 ARHGAP26Q9UNA1 814 aa10.29□□□□□ -0.76
CRLF3-202ENST00000577725 RAI2Q9Y5P3 530 aa10.29□□□□□ -0.76
CRLF3-202ENST00000577725 HACD1B0YJ81 288 aa10.28□□□□□ -0.76
CRLF3-202ENST00000577725 RASA4BC9J798 803 aa10.28□□□□□ -0.76
CRLF3-202ENST00000577725 KCNK1O00180 336 aa10.28□□□□□ -0.76
CRLF3-202ENST00000577725 ZNF197O14709 1029 aa10.28□□□□□ -0.76
CRLF3-202ENST00000577725 PPP1R12AO14974 1030 aaPredicted RBP10.28□□□□□ -0.76
CRLF3-202ENST00000577725 RASA4O43374 803 aa10.28□□□□□ -0.76
CRLF3-202ENST00000577725 TBL1XO60907 577 aa10.28□□□□□ -0.76
CRLF3-202ENST00000577725 EPN2O95208 641 aa10.28□□□□□ -0.76
CRLF3-202ENST00000577725 PRB1P04280 392 aa10.28□□□□□ -0.76
CRLF3-202ENST00000577725 CSRP1P21291 193 aaKnown RBP10.28□□□□□ -0.76
CRLF3-202ENST00000577725 TNFRSF8P28908 595 aa10.28□□□□□ -0.76
CRLF3-202ENST00000577725 SERPINB6P35237 376 aa10.28□□□□□ -0.76
CRLF3-202ENST00000577725 ACVRL1P37023 503 aa10.28□□□□□ -0.76
CRLF3-202ENST00000577725 AVPR1AP37288 418 aa10.28□□□□□ -0.76
CRLF3-202ENST00000577725 GARSP41250 739 aaKnown RBP10.28□□□□□ -0.76
CRLF3-202ENST00000577725 TNNT3P45378 269 aaPredicted RBP10.28□□□□□ -0.76
CRLF3-202ENST00000577725 CXCL12P48061 93 aa10.28□□□□□ -0.76
CRLF3-202ENST00000577725 PAPOLAP51003 745 aaKnown RBP10.28□□□□□ -0.76
CRLF3-202ENST00000577725 ITGA8P53708 1063 aa10.28□□□□□ -0.76
CRLF3-202ENST00000577725 PLTPP55058 493 aa10.28□□□□□ -0.76
CRLF3-202ENST00000577725 XRCC4Q13426 336 aa10.28□□□□□ -0.76
CRLF3-202ENST00000577725 P3H1Q32P28 736 aa10.28□□□□□ -0.76
CRLF3-202ENST00000577725 RABGAP1LQ5R372 815 aa10.28□□□□□ -0.76
CRLF3-202ENST00000577725 PLA2G2CQ5R387 149 aa10.28□□□□□ -0.76
CRLF3-202ENST00000577725 SYCP2LQ5T4T6 812 aa10.28□□□□□ -0.76
CRLF3-202ENST00000577725 AFMIDQ63HM1 303 aa10.28□□□□□ -0.76
CRLF3-202ENST00000577725 HEATR6Q6AI08 1181 aaKnown RBP10.28□□□□□ -0.76
CRLF3-202ENST00000577725 LEKR1Q6ZMV7 388 aa10.28□□□□□ -0.76
CRLF3-202ENST00000577725 ZNF605Q86T29 641 aa10.28□□□□□ -0.76
CRLF3-202ENST00000577725 ZNF354CQ86Y25 554 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms