RNA–Protein interactions for RNA: ENST00000577636.5

SS18-207, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-207ENST00000577636 HSF5Q4G112 596 aaPredicted RBP10.43□□□□□ -0.74
SS18-207ENST00000577636 LY6G5CQ5SRR4 150 aa10.43□□□□□ -0.74
SS18-207ENST00000577636 ALS2CLQ60I27 953 aa10.43□□□□□ -0.74
SS18-207ENST00000577636 TRNP1Q6NT89 227 aa10.43□□□□□ -0.74
SS18-207ENST00000577636 SLC36A4Q6YBV0 504 aa10.43□□□□□ -0.74
SS18-207ENST00000577636 PROSER1Q86XN7 944 aa10.43□□□□□ -0.74
SS18-207ENST00000577636 GSPT2Q8IYD1 628 aaKnown RBP10.43□□□□□ -0.74
SS18-207ENST00000577636 KRT222Q8N1A0 295 aa10.43□□□□□ -0.74
SS18-207ENST00000577636 NUP93Q8N1F7 819 aa10.43□□□□□ -0.74
SS18-207ENST00000577636 ZNF513Q8N8E2 541 aaPredicted RBP10.43□□□□□ -0.74
SS18-207ENST00000577636 ZMIZ2Q8NF64 920 aa10.43□□□□□ -0.74
SS18-207ENST00000577636 PKNOX2Q96KN3 472 aa10.43□□□□□ -0.74
SS18-207ENST00000577636 SPATA17Q96L03 361 aa10.43□□□□□ -0.74
SS18-207ENST00000577636 RNF157Q96PX1 679 aa10.43□□□□□ -0.74
SS18-207ENST00000577636 PEBP4Q96S96 227 aa10.43□□□□□ -0.74
SS18-207ENST00000577636 NPY6RQ99463 290 aa10.43□□□□□ -0.74
SS18-207ENST00000577636 PCDH18Q9HCL0 1135 aa10.43□□□□□ -0.74
SS18-207ENST00000577636 COMMD8Q9NX08 183 aa10.43□□□□□ -0.74
SS18-207ENST00000577636 DDIT4Q9NX09 232 aa10.43□□□□□ -0.74
SS18-207ENST00000577636 COX16Q9P0S2 106 aa10.43□□□□□ -0.74
SS18-207ENST00000577636 WHRNQ9P202 907 aa10.43□□□□□ -0.74
SS18-207ENST00000577636 RCOR3Q9P2K3 495 aaPredicted RBP10.43□□□□□ -0.74
SS18-207ENST00000577636 CYP8B1Q9UNU6 501 aa10.43□□□□□ -0.74
SS18-207ENST00000577636 NAALADL1Q9UQQ1 740 aa10.43□□□□□ -0.74
SS18-207ENST00000577636 SNX24Q9Y343 169 aa10.43□□□□□ -0.74
SS18-207ENST00000577636 SPEGQ15772 3267 aa10.43□□□□□ -0.74
SS18-207ENST00000577636 DENND4CQ5VZ89 1909 aa10.43□□□□□ -0.74
SS18-207ENST00000577636 PCNX2A6NKB5 2137 aa10.42□□□□□ -0.74
SS18-207ENST00000577636 CFAP69A5D8W1 941 aa10.42□□□□□ -0.74
SS18-207ENST00000577636 GOLGA6BA6NDN3 693 aa10.42□□□□□ -0.74
SS18-207ENST00000577636 EIF4E1BA6NMX2 242 aaKnown RBP10.42□□□□□ -0.74
SS18-207ENST00000577636 UPK3BL1B0FP48 263 aa10.42□□□□□ -0.74
SS18-207ENST00000577636 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.42□□□□□ -0.74
SS18-207ENST00000577636 UPK3BL2E5RIL1 263 aa10.42□□□□□ -0.74
SS18-207ENST00000577636 TRIM24O15164 1050 aa10.42□□□□□ -0.74
SS18-207ENST00000577636 RRP9O43818 475 aaKnown RBP10.42□□□□□ -0.74
SS18-207ENST00000577636 OPA1O60313 960 aa10.42□□□□□ -0.74
SS18-207ENST00000577636 NDUFS2O75306 463 aa10.42□□□□□ -0.74
SS18-207ENST00000577636 ZIC2O95409 532 aaPredicted RBP10.42□□□□□ -0.74
SS18-207ENST00000577636 KRT14P02533 472 aa10.42□□□□□ -0.74
SS18-207ENST00000577636 MYBL2P10244 700 aa10.42□□□□□ -0.74
SS18-207ENST00000577636 IRF1P10914 325 aa10.42□□□□□ -0.74
SS18-207ENST00000577636 CD59P13987 128 aa10.42□□□□□ -0.74
SS18-207ENST00000577636 HOXB2P14652 356 aa10.42□□□□□ -0.74
SS18-207ENST00000577636 GABRG2P18507 467 aa10.42□□□□□ -0.74
SS18-207ENST00000577636 MAOBP27338 520 aa10.42□□□□□ -0.74
SS18-207ENST00000577636 NR2C2P49116 596 aa10.42□□□□□ -0.74
SS18-207ENST00000577636 PSEN1P49768 467 aa10.42□□□□□ -0.74
SS18-207ENST00000577636 CACNA2D1P54289 1103 aa10.42□□□□□ -0.74
SS18-207ENST00000577636 PLTPP55058 493 aa10.42□□□□□ -0.74
SS18-207ENST00000577636 EIF3EP60228 445 aaKnown RBP10.42□□□□□ -0.74
SS18-207ENST00000577636 OTUD4Q01804 1114 aaKnown RBP10.42□□□□□ -0.74
SS18-207ENST00000577636 GAD2Q05329 585 aa10.42□□□□□ -0.74
SS18-207ENST00000577636 SLMAPQ14BN4 828 aa10.42□□□□□ -0.74
SS18-207ENST00000577636 DPYSL2Q16555 572 aa10.42□□□□□ -0.74
SS18-207ENST00000577636 ZNF423Q2M1K9 1284 aa10.42□□□□□ -0.74
SS18-207ENST00000577636 PLEKHG6Q3KR16 790 aa10.42□□□□□ -0.74
SS18-207ENST00000577636 SOWAHCQ53LP3 525 aaPredicted RBP10.42□□□□□ -0.74
SS18-207ENST00000577636 ANKRD20A8PQ5CZ79 823 aa10.42□□□□□ -0.74
SS18-207ENST00000577636 ZC3H12AQ5D1E8 599 aaKnown RBP10.42□□□□□ -0.74
SS18-207ENST00000577636 SPDYCQ5MJ68 293 aa10.42□□□□□ -0.74
SS18-207ENST00000577636 CFAP58Q5T655 872 aa10.42□□□□□ -0.74
SS18-207ENST00000577636 BSPRYQ5W0U4 402 aa10.42□□□□□ -0.74
SS18-207ENST00000577636 GPRIN1Q7Z2K8 1008 aa10.42□□□□□ -0.74
SS18-207ENST00000577636 RAB44Q7Z6P3 723 aaPredicted RBP10.42□□□□□ -0.74
SS18-207ENST00000577636 PDZD3Q86UT5 571 aa10.42□□□□□ -0.74
SS18-207ENST00000577636 FAM131BQ86XD5 332 aa10.42□□□□□ -0.74
SS18-207ENST00000577636 ACTL9Q8TC94 416 aa10.42□□□□□ -0.74
SS18-207ENST00000577636 NT5C3BQ969T7 300 aa10.42□□□□□ -0.74
SS18-207ENST00000577636 NTAN1Q96AB6 310 aa10.42□□□□□ -0.74
SS18-207ENST00000577636 CEP295NLQ96MC4 621 aa10.42□□□□□ -0.74
SS18-207ENST00000577636 HSPA12BQ96MM6 686 aa10.42□□□□□ -0.74
SS18-207ENST00000577636 GDAP1L1Q96MZ0 367 aa10.42□□□□□ -0.74
SS18-207ENST00000577636 CCDC86Q9H6F5 360 aaKnown RBP10.42□□□□□ -0.74
SS18-207ENST00000577636 CALCOCO1Q9P1Z2 691 aa10.42□□□□□ -0.74
SS18-207ENST00000577636 DEC1Q9P2X7 70 aa10.42□□□□□ -0.74
SS18-207ENST00000577636 ANAPC5Q9UJX4 755 aa10.42□□□□□ -0.74
SS18-207ENST00000577636 R3HDM2Q9Y2K5 976 aaKnown RBP10.42□□□□□ -0.74
SS18-207ENST00000577636 SH3BP1Q9Y3L3 701 aa10.42□□□□□ -0.74
SS18-207ENST00000577636 GPSM3Q9Y4H4 160 aa10.42□□□□□ -0.74
SS18-207ENST00000577636 USP3Q9Y6I4 520 aa10.42□□□□□ -0.74
SS18-207ENST00000577636 IGHV1OR15-9A0A0B4J2B8 117 aa10.41□□□□□ -0.74
SS18-207ENST00000577636 GOLGA6L10A6NI86 522 aa10.41□□□□□ -0.74
SS18-207ENST00000577636 H7C0C1 242 aa10.41□□□□□ -0.74
SS18-207ENST00000577636 MAP2K7O14733 419 aa10.41□□□□□ -0.74
SS18-207ENST00000577636 STK10O94804 968 aaKnown RBP10.41□□□□□ -0.74
SS18-207ENST00000577636 FTH1P19P0C7X4 201 aa10.41□□□□□ -0.74
SS18-207ENST00000577636 PFKLP17858 780 aa10.41□□□□□ -0.74
SS18-207ENST00000577636 STIP1P31948 543 aaKnown RBP10.41□□□□□ -0.74
SS18-207ENST00000577636 L1CAMP32004 1257 aa10.41□□□□□ -0.74
SS18-207ENST00000577636 EIF2DP41214 584 aaKnown RBP10.41□□□□□ -0.74
SS18-207ENST00000577636 ATP5OP48047 213 aa10.41□□□□□ -0.74
SS18-207ENST00000577636 PPP3CCP48454 512 aa10.41□□□□□ -0.74
SS18-207ENST00000577636 HNRNPDQ14103 355 aaKnown RBP10.41□□□□□ -0.74
SS18-207ENST00000577636 SYPL2Q5VXT5 272 aa10.41□□□□□ -0.74
SS18-207ENST00000577636 SDE2Q6IQ49 451 aa10.41□□□□□ -0.74
SS18-207ENST00000577636 DARS2Q6PI48 645 aaKnown RBP10.41□□□□□ -0.74
SS18-207ENST00000577636 NUDT18Q6ZVK8 323 aa10.41□□□□□ -0.74
SS18-207ENST00000577636 TRMT11Q7Z4G4 463 aaKnown RBP10.41□□□□□ -0.74
SS18-207ENST00000577636 PCGF5Q86SE9 256 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms