RNA–Protein interactions for RNA: ENST00000575560.5

CALCOCO2-227, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 5

Gene CALCOCO2, Length 540 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-227ENST00000575560 ATP11CQ8NB49 1132 aa10.21□□□□□ -0.77
CALCOCO2-227ENST00000575560 TPCN2Q8NHX9 752 aa10.21□□□□□ -0.77
CALCOCO2-227ENST00000575560 RPRD1AQ96P16 312 aaPredicted RBP10.21□□□□□ -0.77
CALCOCO2-227ENST00000575560 PSMB7Q99436 277 aa10.21□□□□□ -0.77
CALCOCO2-227ENST00000575560 TSG101Q99816 390 aa10.21□□□□□ -0.77
CALCOCO2-227ENST00000575560 SLC17A9Q9BYT1 436 aa10.21□□□□□ -0.77
CALCOCO2-227ENST00000575560 GOLPH3LQ9H4A5 285 aa10.21□□□□□ -0.77
CALCOCO2-227ENST00000575560 IL17BQ9UHF5 180 aa10.21□□□□□ -0.77
CALCOCO2-227ENST00000575560 KLF15Q9UIH9 416 aa10.21□□□□□ -0.77
CALCOCO2-227ENST00000575560 VPS28Q9UK41 221 aa10.21□□□□□ -0.77
CALCOCO2-227ENST00000575560 VANGL2Q9ULK5 521 aa10.21□□□□□ -0.77
CALCOCO2-227ENST00000575560 HS3ST4Q9Y661 456 aa10.21□□□□□ -0.77
CALCOCO2-227ENST00000575560 CPED1A4D0V7 1026 aa10.2□□□□□ -0.78
CALCOCO2-227ENST00000575560 TPP1O14773 563 aa10.2□□□□□ -0.78
CALCOCO2-227ENST00000575560 RAD51BO15315 384 aa10.2□□□□□ -0.78
CALCOCO2-227ENST00000575560 SMAD6O43541 496 aaKnown RBP10.2□□□□□ -0.78
CALCOCO2-227ENST00000575560 CLDN11O75508 207 aa10.2□□□□□ -0.78
CALCOCO2-227ENST00000575560 TCEA3O75764 348 aa10.2□□□□□ -0.78
CALCOCO2-227ENST00000575560 PCDH8O95206 1070 aa10.2□□□□□ -0.78
CALCOCO2-227ENST00000575560 PAK4O96013 591 aaPredicted RBP10.2□□□□□ -0.78
CALCOCO2-227ENST00000575560 PRNPP04156 253 aa10.2□□□□□ -0.78
CALCOCO2-227ENST00000575560 GLI1P08151 1106 aa10.2□□□□□ -0.78
CALCOCO2-227ENST00000575560 MLLT3P42568 568 aaPredicted RBP10.2□□□□□ -0.78
CALCOCO2-227ENST00000575560 RPS21P63220 83 aaKnown RBP10.2□□□□□ -0.78
CALCOCO2-227ENST00000575560 CDK17Q00537 523 aa10.2□□□□□ -0.78
CALCOCO2-227ENST00000575560 LRRC63Q05C16 580 aa10.2□□□□□ -0.78
CALCOCO2-227ENST00000575560 SRSF1Q07955 248 aaKnown RBP eCLIP10.2□□□□□ -0.78
CALCOCO2-227ENST00000575560 LINC00303Q3SY05 128 aa10.2□□□□□ -0.78
CALCOCO2-227ENST00000575560 ARSIQ5FYB1 569 aa10.2□□□□□ -0.78
CALCOCO2-227ENST00000575560 ZNF658Q5TYW1 1059 aaPredicted RBP10.2□□□□□ -0.78
CALCOCO2-227ENST00000575560 KYAT3Q6YP21 454 aaKnown RBP10.2□□□□□ -0.78
CALCOCO2-227ENST00000575560 RBM44Q6ZP01 1051 aaKnown RBP10.2□□□□□ -0.78
CALCOCO2-227ENST00000575560 EFL1Q7Z2Z2 1120 aaKnown RBP10.2□□□□□ -0.78
CALCOCO2-227ENST00000575560 C14orf80Q86SX3 495 aa10.2□□□□□ -0.78
CALCOCO2-227ENST00000575560 ARHGEF19Q8IW93 802 aa10.2□□□□□ -0.78
CALCOCO2-227ENST00000575560 ARL14Q8N4G2 192 aa10.2□□□□□ -0.78
CALCOCO2-227ENST00000575560 CHST14Q8NCH0 376 aa10.2□□□□□ -0.78
CALCOCO2-227ENST00000575560 EHBP1Q8NDI1 1231 aa10.2□□□□□ -0.78
CALCOCO2-227ENST00000575560 ZNF606Q8WXB4 792 aa10.2□□□□□ -0.78
CALCOCO2-227ENST00000575560 RNF34Q969K3 372 aa10.2□□□□□ -0.78
CALCOCO2-227ENST00000575560 CCDC114Q96M63 670 aa10.2□□□□□ -0.78
CALCOCO2-227ENST00000575560 KREMEN1Q96MU8 473 aa10.2□□□□□ -0.78
CALCOCO2-227ENST00000575560 LENG8Q96PV6 779 aaPredicted RBP10.2□□□□□ -0.78
CALCOCO2-227ENST00000575560 SLC2A13Q96QE2 648 aa10.2□□□□□ -0.78
CALCOCO2-227ENST00000575560 CCNL2Q96S94 520 aaPredicted RBP10.2□□□□□ -0.78
CALCOCO2-227ENST00000575560 KLF6Q99612 283 aaPredicted RBP10.2□□□□□ -0.78
CALCOCO2-227ENST00000575560 BOCQ9BWV1 1114 aa10.2□□□□□ -0.78
CALCOCO2-227ENST00000575560 DDIT4Q9NX09 232 aa10.2□□□□□ -0.78
CALCOCO2-227ENST00000575560 FLNCQ14315 2725 aa10.2□□□□□ -0.78
CALCOCO2-227ENST00000575560 PTPN13Q12923 2485 aa10.19□□□□□ -0.78
CALCOCO2-227ENST00000575560 TRIM49BA6NDI0 452 aa10.19□□□□□ -0.78
CALCOCO2-227ENST00000575560 H3BM21 787 aa10.19□□□□□ -0.78
CALCOCO2-227ENST00000575560 CASC3O15234 703 aaKnown RBP10.19□□□□□ -0.78
CALCOCO2-227ENST00000575560 P4HA2O15460 535 aa10.19□□□□□ -0.78
CALCOCO2-227ENST00000575560 SPINT1O43278 529 aa10.19□□□□□ -0.78
CALCOCO2-227ENST00000575560 AQP9O43315 295 aa10.19□□□□□ -0.78
CALCOCO2-227ENST00000575560 SNAP91O60641 907 aa10.19□□□□□ -0.78
CALCOCO2-227ENST00000575560 ZNF821O75541 412 aaPredicted RBP10.19□□□□□ -0.78
CALCOCO2-227ENST00000575560 CNTN5O94779 1100 aa10.19□□□□□ -0.78
CALCOCO2-227ENST00000575560 TNFSF15O95150 251 aa10.19□□□□□ -0.78
CALCOCO2-227ENST00000575560 CENPBP07199 599 aaPredicted RBP10.19□□□□□ -0.78
CALCOCO2-227ENST00000575560 RRM1P23921 792 aa10.19□□□□□ -0.78
CALCOCO2-227ENST00000575560 RABIFP47224 123 aa10.19□□□□□ -0.78
CALCOCO2-227ENST00000575560 PDX1P52945 283 aa10.19□□□□□ -0.78
CALCOCO2-227ENST00000575560 CDH4P55283 916 aa10.19□□□□□ -0.78
CALCOCO2-227ENST00000575560 KRT83P78385 493 aa10.19□□□□□ -0.78
CALCOCO2-227ENST00000575560 MTA1Q13330 715 aa10.19□□□□□ -0.78
CALCOCO2-227ENST00000575560 PNOCQ13519 176 aa10.19□□□□□ -0.78
CALCOCO2-227ENST00000575560 NR0B2Q15466 257 aa10.19□□□□□ -0.78
CALCOCO2-227ENST00000575560 DEFB133Q30KQ1 61 aa10.19□□□□□ -0.78
CALCOCO2-227ENST00000575560 PERM1Q5SV97 790 aa10.19□□□□□ -0.78
CALCOCO2-227ENST00000575560 TPRG1LQ5T0D9 272 aa10.19□□□□□ -0.78
CALCOCO2-227ENST00000575560 KIAA1161Q6NSJ0 714 aa10.19□□□□□ -0.78
CALCOCO2-227ENST00000575560 XKR5Q6UX68 686 aa10.19□□□□□ -0.78
CALCOCO2-227ENST00000575560 PRICKLE2Q7Z3G6 844 aa10.19□□□□□ -0.78
CALCOCO2-227ENST00000575560 PTAR1Q7Z6K3 402 aaPredicted RBP10.19□□□□□ -0.78
CALCOCO2-227ENST00000575560 PARGQ86W56 976 aa10.19□□□□□ -0.78
CALCOCO2-227ENST00000575560 DEFB106AQ8N104 65 aa10.19□□□□□ -0.78
CALCOCO2-227ENST00000575560 WDTC1Q8N5D0 677 aa10.19□□□□□ -0.78
CALCOCO2-227ENST00000575560 WDR36Q8NI36 951 aaKnown RBP10.19□□□□□ -0.78
CALCOCO2-227ENST00000575560 SPATA20Q8TB22 786 aa10.19□□□□□ -0.78
CALCOCO2-227ENST00000575560 FEM1CQ96JP0 617 aa10.19□□□□□ -0.78
CALCOCO2-227ENST00000575560 GSDMAQ96QA5 445 aa10.19□□□□□ -0.78
CALCOCO2-227ENST00000575560 C2orf49Q9BVC5 232 aaPredicted RBP10.19□□□□□ -0.78
CALCOCO2-227ENST00000575560 FAM204AQ9H8W3 233 aa10.19□□□□□ -0.78
CALCOCO2-227ENST00000575560 DYRK4Q9NR20 520 aa10.19□□□□□ -0.78
CALCOCO2-227ENST00000575560 RMND1Q9NWS8 449 aa10.19□□□□□ -0.78
CALCOCO2-227ENST00000575560 IL36AQ9UHA7 158 aa10.19□□□□□ -0.78
CALCOCO2-227ENST00000575560 VPS51Q9UID3 782 aa10.19□□□□□ -0.78
CALCOCO2-227ENST00000575560 ATXN7L1Q9ULK2 861 aaPredicted RBP10.19□□□□□ -0.78
CALCOCO2-227ENST00000575560 FADS3Q9Y5Q0 445 aa10.19□□□□□ -0.78
CALCOCO2-227ENST00000575560 WASF2Q9Y6W5 498 aa10.19□□□□□ -0.78
CALCOCO2-227ENST00000575560 SYNJ2BP-COX16A0A087WUM0 186 aa10.18□□□□□ -0.78
CALCOCO2-227ENST00000575560 CCDC187A0A096LP49 1063 aa10.18□□□□□ -0.78
CALCOCO2-227ENST00000575560 A0A0D9SEW6 157 aa10.18□□□□□ -0.78
CALCOCO2-227ENST00000575560 TERTO14746 1132 aaKnown RBP10.18□□□□□ -0.78
CALCOCO2-227ENST00000575560 MED7O43513 233 aa10.18□□□□□ -0.78
CALCOCO2-227ENST00000575560 AP1G1O43747 822 aa10.18□□□□□ -0.78
CALCOCO2-227ENST00000575560 NOBOXO60393 691 aa10.18□□□□□ -0.78
CALCOCO2-227ENST00000575560 PAGE1O75459 146 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms