RNA–Protein interactions for RNA: ENST00000573827.1

SMG6-214, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-214ENST00000573827 ZNF143P52747 638 aaPredicted RBP17.81■□□□□ 0.44
SMG6-214ENST00000573827 FAM46CQ5VWP2 391 aa17.81■□□□□ 0.44
SMG6-214ENST00000573827 ACAD10Q6JQN1 1059 aa17.81■□□□□ 0.44
SMG6-214ENST00000573827 DPY19L3Q6ZPD9 716 aa17.81■□□□□ 0.44
SMG6-214ENST00000573827 TRIM69Q86WT6 500 aa17.81■□□□□ 0.44
SMG6-214ENST00000573827 DRC7Q8IY82 874 aa17.81■□□□□ 0.44
SMG6-214ENST00000573827 MCOLN2Q8IZK6 566 aa17.81■□□□□ 0.44
SMG6-214ENST00000573827 TMIEQ8NEW7 156 aa17.81■□□□□ 0.44
SMG6-214ENST00000573827 NAT10Q9H0A0 1025 aaKnown RBP17.81■□□□□ 0.44
SMG6-214ENST00000573827 RETREG1Q9H6L5 497 aa17.81■□□□□ 0.44
SMG6-214ENST00000573827 TMEM248Q9NWD8 314 aa17.81■□□□□ 0.44
SMG6-214ENST00000573827 TPX2Q9ULW0 747 aaKnown RBP17.81■□□□□ 0.44
SMG6-214ENST00000573827 GOLGA4Q13439 2230 aaKnown RBP17.81■□□□□ 0.44
SMG6-214ENST00000573827 FAM208BQ5VWN6 2430 aa17.8■□□□□ 0.44
SMG6-214ENST00000573827 A0A1W2PQC6 194 aa17.8■□□□□ 0.44
SMG6-214ENST00000573827 C1QTNF9BB2RNN3 333 aa17.8■□□□□ 0.44
SMG6-214ENST00000573827 C1QTNF9P0C862 333 aa17.8■□□□□ 0.44
SMG6-214ENST00000573827 MAPKAPK2P49137 400 aa17.8■□□□□ 0.44
SMG6-214ENST00000573827 ZNF165P49910 485 aa17.8■□□□□ 0.44
SMG6-214ENST00000573827 SLC20A2Q08357 652 aa17.8■□□□□ 0.44
SMG6-214ENST00000573827 SLCO6A1Q86UG4 719 aa17.8■□□□□ 0.44
SMG6-214ENST00000573827 PYROXD2Q8N2H3 581 aa17.8■□□□□ 0.44
SMG6-214ENST00000573827 ARHGEF2Q92974 986 aaKnown RBP17.8■□□□□ 0.44
SMG6-214ENST00000573827 SPON2Q9BUD6 331 aa17.8■□□□□ 0.44
SMG6-214ENST00000573827 SELENOOQ9BVL4 669 aa17.8■□□□□ 0.44
SMG6-214ENST00000573827 CEP44Q9C0F1 390 aa17.8■□□□□ 0.44
SMG6-214ENST00000573827 TNKS2Q9H2K2 1166 aa17.8■□□□□ 0.44
SMG6-214ENST00000573827 ATP13A1Q9HD20 1204 aa17.8■□□□□ 0.44
SMG6-214ENST00000573827 KLK13Q9UKR3 277 aa17.8■□□□□ 0.44
SMG6-214ENST00000573827 NEUROG3Q9Y4Z2 214 aa17.8■□□□□ 0.44
SMG6-214ENST00000573827 TBC1D3DA0A087WVF3 549 aa17.79■□□□□ 0.44
SMG6-214ENST00000573827 TBC1D3IA0A087WXS9 549 aa17.79■□□□□ 0.44
SMG6-214ENST00000573827 TBC1D3EA0A087X179 549 aa17.79■□□□□ 0.44
SMG6-214ENST00000573827 TBC1D3KA0A087X1G2 549 aa17.79■□□□□ 0.44
SMG6-214ENST00000573827 A0A1B0GTQ1 180 aa17.79■□□□□ 0.44
SMG6-214ENST00000573827 TBC1D3FA6NER0 549 aaPredicted RBP17.79■□□□□ 0.44
SMG6-214ENST00000573827 LRRC53A6NM62 1247 aa17.79■□□□□ 0.44
SMG6-214ENST00000573827 TBC1D3LB9A6J9 549 aa17.79■□□□□ 0.44
SMG6-214ENST00000573827 C1QTNF3-AMACRE9PGA6 284 aa17.79■□□□□ 0.44
SMG6-214ENST00000573827 CBX4O00257 560 aa17.79■□□□□ 0.44
SMG6-214ENST00000573827 FLRT2O43155 660 aa17.79■□□□□ 0.44
SMG6-214ENST00000573827 TBC1D3HP0C7X1 549 aa17.79■□□□□ 0.44
SMG6-214ENST00000573827 FTH1P19P0C7X4 201 aa17.79■□□□□ 0.44
SMG6-214ENST00000573827 NR1I3Q14994 352 aa17.79■□□□□ 0.44
SMG6-214ENST00000573827 ARL13BQ3SXY8 428 aa17.79■□□□□ 0.44
SMG6-214ENST00000573827 PRAMEF14Q5SWL7 426 aa17.79■□□□□ 0.44
SMG6-214ENST00000573827 TBC1D3GQ6DHY5 549 aa17.79■□□□□ 0.44
SMG6-214ENST00000573827 TBC1D3CQ6IPX1 549 aa17.79■□□□□ 0.44
SMG6-214ENST00000573827 RETSATQ6NUM9 610 aa17.79■□□□□ 0.44
SMG6-214ENST00000573827 DNAJC24Q6P3W2 148 aa17.79■□□□□ 0.44
SMG6-214ENST00000573827 TBC1D3Q8IZP1 549 aaPredicted RBP17.79■□□□□ 0.44
SMG6-214ENST00000573827 ARFGAP1Q8N6T3 406 aa17.79■□□□□ 0.44
SMG6-214ENST00000573827 MCEEQ96PE7 176 aa17.79■□□□□ 0.44
SMG6-214ENST00000573827 CNPY3Q9BT09 278 aa17.79■□□□□ 0.44
SMG6-214ENST00000573827 HDAC8Q9BY41 377 aa17.79■□□□□ 0.44
SMG6-214ENST00000573827 AIPL1Q9NZN9 384 aa17.79■□□□□ 0.44
SMG6-214ENST00000573827 NBEAQ8NFP9 2946 aa17.79■□□□□ 0.44
SMG6-214ENST00000573827 SMTNL1A8MU46 457 aa17.78■□□□□ 0.44
SMG6-214ENST00000573827 BNIP3LO60238 219 aa17.78■□□□□ 0.44
SMG6-214ENST00000573827 TRIM16O95361 564 aa17.78■□□□□ 0.44
SMG6-214ENST00000573827 PROS1P07225 676 aa17.78■□□□□ 0.44
SMG6-214ENST00000573827 CD38P28907 300 aa17.78■□□□□ 0.44
SMG6-214ENST00000573827 L1CAMP32004 1257 aa17.78■□□□□ 0.44
SMG6-214ENST00000573827 PBX1P40424 430 aa17.78■□□□□ 0.44
SMG6-214ENST00000573827 PRKCIP41743 596 aa17.78■□□□□ 0.44
SMG6-214ENST00000573827 CCT8P50990 548 aa17.78■□□□□ 0.44
SMG6-214ENST00000573827 NXPH1P58417 271 aa17.78■□□□□ 0.44
SMG6-214ENST00000573827 MAMLD1Q13495 774 aa17.78■□□□□ 0.44
SMG6-214ENST00000573827 ST3GAL2Q16842 350 aa17.78■□□□□ 0.44
SMG6-214ENST00000573827 NAPEPLDQ6IQ20 393 aa17.78■□□□□ 0.44
SMG6-214ENST00000573827 PLEKHA7Q6IQ23 1121 aa17.78■□□□□ 0.44
SMG6-214ENST00000573827 LRSAM1Q6UWE0 723 aa17.78■□□□□ 0.44
SMG6-214ENST00000573827 UNQ6494/PRO21346Q6UXR6 183 aa17.78■□□□□ 0.44
SMG6-214ENST00000573827 ZNF571Q7Z3V5 609 aaPredicted RBP17.78■□□□□ 0.44
SMG6-214ENST00000573827 SPATS2Q86XZ4 545 aaKnown RBP17.78■□□□□ 0.44
SMG6-214ENST00000573827 DNAAF5Q86Y56 855 aa17.78■□□□□ 0.44
SMG6-214ENST00000573827 CHCHD4Q8N4Q1 142 aa17.78■□□□□ 0.44
SMG6-214ENST00000573827 PCDH20Q8N6Y1 951 aaKnown RBP17.78■□□□□ 0.44
SMG6-214ENST00000573827 TMEM145Q8NBT3 493 aa17.78■□□□□ 0.44
SMG6-214ENST00000573827 ADAMTS14Q8WXS8 1223 aa17.78■□□□□ 0.44
SMG6-214ENST00000573827 TBC1D31Q96DN5 1066 aa17.78■□□□□ 0.44
SMG6-214ENST00000573827 VCPIP1Q96JH7 1222 aa17.78■□□□□ 0.44
SMG6-214ENST00000573827 SERAC1Q96JX3 654 aa17.78■□□□□ 0.44
SMG6-214ENST00000573827 PREBQ9HCU5 417 aa17.78■□□□□ 0.44
SMG6-214ENST00000573827 SEPT11Q9NVA2 429 aaKnown RBP17.78■□□□□ 0.44
SMG6-214ENST00000573827 DNAI1Q9UI46 699 aa17.78■□□□□ 0.44
SMG6-214ENST00000573827 FCF1Q9Y324 198 aaKnown RBP17.78■□□□□ 0.44
SMG6-214ENST00000573827 DDX3XO00571 662 aaKnown RBP eCLIP17.77■□□□□ 0.44
SMG6-214ENST00000573827 LEFTY1O75610 366 aa17.77■□□□□ 0.44
SMG6-214ENST00000573827 PRNPP04156 253 aa17.77■□□□□ 0.44
SMG6-214ENST00000573827 CAPNS1P04632 268 aa17.77■□□□□ 0.44
SMG6-214ENST00000573827 KLHL40Q2TBA0 621 aa17.77■□□□□ 0.44
SMG6-214ENST00000573827 ARSIQ5FYB1 569 aa17.77■□□□□ 0.44
SMG6-214ENST00000573827 RWDD4Q6NW29 188 aaKnown RBP17.77■□□□□ 0.44
SMG6-214ENST00000573827 SLFN11Q7Z7L1 901 aa17.77■□□□□ 0.44
SMG6-214ENST00000573827 PLPP6Q8IY26 295 aa17.77■□□□□ 0.44
SMG6-214ENST00000573827 PNPLA1Q8N8W4 532 aa17.77■□□□□ 0.44
SMG6-214ENST00000573827 MFSD2AQ8NA29 543 aa17.77■□□□□ 0.44
SMG6-214ENST00000573827 KDF1Q8NAX2 398 aaPredicted RBP17.77■□□□□ 0.44
SMG6-214ENST00000573827 GRIN3AQ8TCU5 1115 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms