RNA–Protein interactions for RNA: ENST00000573126.1

RPAIN-212, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 2,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-212ENST00000573126 DQX1Q8TE96 717 aaKnown RBP11.4□□□□□ -0.58
RPAIN-212ENST00000573126 DPF3Q92784 378 aa11.4□□□□□ -0.58
RPAIN-212ENST00000573126 VAT1Q99536 393 aa11.4□□□□□ -0.58
RPAIN-212ENST00000573126 BRD8Q9H0E9 1235 aa11.4□□□□□ -0.58
RPAIN-212ENST00000573126 DNAJB4Q9UDY4 337 aa11.4□□□□□ -0.58
RPAIN-212ENST00000573126 NUDT5Q9UKK9 219 aa11.4□□□□□ -0.58
RPAIN-212ENST00000573126 ADAMTS6Q9UKP5 1117 aa11.4□□□□□ -0.58
RPAIN-212ENST00000573126 CDH9Q9ULB4 789 aa11.4□□□□□ -0.58
RPAIN-212ENST00000573126 ARHGAP26Q9UNA1 814 aa11.4□□□□□ -0.58
RPAIN-212ENST00000573126 MYADML2A6NDP7 307 aa11.4□□□□□ -0.58
RPAIN-212ENST00000573126 TMEM114B3SHH9 223 aa11.4□□□□□ -0.58
RPAIN-212ENST00000573126 MSI1O43347 362 aaKnown RBP11.4□□□□□ -0.58
RPAIN-212ENST00000573126 B3GAT3O94766 335 aa11.4□□□□□ -0.58
RPAIN-212ENST00000573126 PIGNO95427 931 aa11.4□□□□□ -0.58
RPAIN-212ENST00000573126 JUNP05412 331 aaKnown RBP11.4□□□□□ -0.58
RPAIN-212ENST00000573126 CRABP2P29373 138 aa11.4□□□□□ -0.58
RPAIN-212ENST00000573126 PRPSAP1Q14558 356 aa11.4□□□□□ -0.58
RPAIN-212ENST00000573126 FSCN1Q16658 493 aaKnown RBP11.4□□□□□ -0.58
RPAIN-212ENST00000573126 FSTL5Q8N475 847 aaPredicted RBP11.4□□□□□ -0.58
RPAIN-212ENST00000573126 TMEM209Q96SK2 561 aa11.4□□□□□ -0.58
RPAIN-212ENST00000573126 OMDQ99983 421 aa11.4□□□□□ -0.58
RPAIN-212ENST00000573126 RTP3Q9BQQ7 232 aa11.4□□□□□ -0.58
RPAIN-212ENST00000573126 KIFC1Q9BW19 673 aa11.4□□□□□ -0.58
RPAIN-212ENST00000573126 C1QTNF1Q9BXJ1 281 aa11.4□□□□□ -0.58
RPAIN-212ENST00000573126 RHOJQ9H4E5 214 aa11.4□□□□□ -0.58
RPAIN-212ENST00000573126 NDFIP2Q9NV92 336 aa11.4□□□□□ -0.58
RPAIN-212ENST00000573126 TMLHEQ9NVH6 421 aa11.4□□□□□ -0.58
RPAIN-212ENST00000573126 SLC2A6Q9UGQ3 507 aa11.4□□□□□ -0.58
RPAIN-212ENST00000573126 RUVBL2Q9Y230 463 aaKnown RBP11.4□□□□□ -0.58
RPAIN-212ENST00000573126 PTCH2Q9Y6C5 1203 aa11.4□□□□□ -0.58
RPAIN-212ENST00000573126 MAGEA13PA6NCF6 341 aa11.39□□□□□ -0.59
RPAIN-212ENST00000573126 MATN2O00339 956 aa11.39□□□□□ -0.59
RPAIN-212ENST00000573126 SMIM24O75264 130 aa11.39□□□□□ -0.59
RPAIN-212ENST00000573126 POMCP01189 267 aa11.39□□□□□ -0.59
RPAIN-212ENST00000573126 PEX2P28328 305 aa11.39□□□□□ -0.59
RPAIN-212ENST00000573126 PCSK1P29120 753 aa11.39□□□□□ -0.59
RPAIN-212ENST00000573126 BRCC3P46736 316 aa11.39□□□□□ -0.59
RPAIN-212ENST00000573126 NUDT2P50583 147 aa11.39□□□□□ -0.59
RPAIN-212ENST00000573126 PURAQ00577 322 aaKnown RBP11.39□□□□□ -0.59
RPAIN-212ENST00000573126 BTKQ06187 659 aa11.39□□□□□ -0.59
RPAIN-212ENST00000573126 LSM12Q3MHD2 195 aaKnown RBP11.39□□□□□ -0.59
RPAIN-212ENST00000573126 MORN1Q5T089 497 aa11.39□□□□□ -0.59
RPAIN-212ENST00000573126 LIPMQ5VYY2 423 aa11.39□□□□□ -0.59
RPAIN-212ENST00000573126 SEL1L3Q68CR1 1132 aa11.39□□□□□ -0.59
RPAIN-212ENST00000573126 NAIF1Q69YI7 327 aaPredicted RBP11.39□□□□□ -0.59
RPAIN-212ENST00000573126 PM20D1Q6GTS8 502 aa11.39□□□□□ -0.59
RPAIN-212ENST00000573126 ESRP1Q6NXG1 681 aaKnown RBP11.39□□□□□ -0.59
RPAIN-212ENST00000573126 DCLRE1AQ6PJP8 1040 aa11.39□□□□□ -0.59
RPAIN-212ENST00000573126 AGMOQ6ZNB7 445 aa11.39□□□□□ -0.59
RPAIN-212ENST00000573126 CENPLQ8N0S6 344 aaPredicted RBP11.39□□□□□ -0.59
RPAIN-212ENST00000573126 FBXW8Q8N3Y1 598 aa11.39□□□□□ -0.59
RPAIN-212ENST00000573126 ATPAF2Q8N5M1 289 aa11.39□□□□□ -0.59
RPAIN-212ENST00000573126 MARK4Q96L34 752 aa11.39□□□□□ -0.59
RPAIN-212ENST00000573126 TSNARE1Q96NA8 513 aa11.39□□□□□ -0.59
RPAIN-212ENST00000573126 EBF3Q9H4W6 596 aa11.39□□□□□ -0.59
RPAIN-212ENST00000573126 PIDD1Q9HB75 910 aa11.39□□□□□ -0.59
RPAIN-212ENST00000573126 SPON1Q9HCB6 807 aa11.39□□□□□ -0.59
RPAIN-212ENST00000573126 XPR1Q9UBH6 696 aa11.39□□□□□ -0.59
RPAIN-212ENST00000573126 ZDHHC2Q9UIJ5 367 aa11.39□□□□□ -0.59
RPAIN-212ENST00000573126 M0QZ92 97 aa11.39□□□□□ -0.59
RPAIN-212ENST00000573126 HDAC3O15379 428 aa11.39□□□□□ -0.59
RPAIN-212ENST00000573126 CAPN15O75808 1086 aa11.39□□□□□ -0.59
RPAIN-212ENST00000573126 RAG1P15918 1043 aa11.39□□□□□ -0.59
RPAIN-212ENST00000573126 TFEBP19484 476 aa11.39□□□□□ -0.59
RPAIN-212ENST00000573126 GLDCP23378 1020 aa11.39□□□□□ -0.59
RPAIN-212ENST00000573126 PGFP49763 221 aa11.39□□□□□ -0.59
RPAIN-212ENST00000573126 RPL14P50914 215 aaKnown RBP11.39□□□□□ -0.59
RPAIN-212ENST00000573126 MRPS6P82932 125 aaKnown RBP11.39□□□□□ -0.59
RPAIN-212ENST00000573126 FRG1Q14331 258 aaKnown RBP11.39□□□□□ -0.59
RPAIN-212ENST00000573126 SPRYD7Q5W111 196 aa11.39□□□□□ -0.59
RPAIN-212ENST00000573126 AAGABQ6PD74 315 aa11.39□□□□□ -0.59
RPAIN-212ENST00000573126 ZYG11AQ6WRX3 759 aa11.39□□□□□ -0.59
RPAIN-212ENST00000573126 TMC7Q7Z402 723 aa11.39□□□□□ -0.59
RPAIN-212ENST00000573126 SNX32Q86XE0 403 aa11.39□□□□□ -0.59
RPAIN-212ENST00000573126 CEP97Q8IW35 865 aa11.39□□□□□ -0.59
RPAIN-212ENST00000573126 MFSD6LQ8IWD5 586 aa11.39□□□□□ -0.59
RPAIN-212ENST00000573126 SGF29Q96ES7 293 aa11.39□□□□□ -0.59
RPAIN-212ENST00000573126 SYT17Q9BSW7 474 aa11.39□□□□□ -0.59
RPAIN-212ENST00000573126 FICDQ9BVA6 458 aa11.39□□□□□ -0.59
RPAIN-212ENST00000573126 RRN3Q9NYV6 651 aa11.39□□□□□ -0.59
RPAIN-212ENST00000573126 SFMBT1Q9UHJ3 866 aa11.39□□□□□ -0.59
RPAIN-212ENST00000573126 RAP2CQ9Y3L5 183 aa11.39□□□□□ -0.59
RPAIN-212ENST00000573126 PMPCBO75439 489 aa11.38□□□□□ -0.59
RPAIN-212ENST00000573126 LYNP07948 512 aa11.38□□□□□ -0.59
RPAIN-212ENST00000573126 GNAT1P11488 350 aa11.38□□□□□ -0.59
RPAIN-212ENST00000573126 ARNTP27540 789 aa11.38□□□□□ -0.59
RPAIN-212ENST00000573126 MSX2P35548 267 aaPredicted RBP11.38□□□□□ -0.59
RPAIN-212ENST00000573126 PDCD2Q16342 344 aaPredicted RBP11.38□□□□□ -0.59
RPAIN-212ENST00000573126 UPP1Q16831 310 aa11.38□□□□□ -0.59
RPAIN-212ENST00000573126 SFT2D3Q587I9 215 aa11.38□□□□□ -0.59
RPAIN-212ENST00000573126 FOXB2Q5VYV0 432 aa11.38□□□□□ -0.59
RPAIN-212ENST00000573126 NXNQ6DKJ4 435 aa11.38□□□□□ -0.59
RPAIN-212ENST00000573126 PKN3Q6P5Z2 889 aa11.38□□□□□ -0.59
RPAIN-212ENST00000573126 ARHGAP12Q8IWW6 846 aa11.38□□□□□ -0.59
RPAIN-212ENST00000573126 CCNYL1Q8N7R7 359 aa11.38□□□□□ -0.59
RPAIN-212ENST00000573126 PNPLA1Q8N8W4 532 aa11.38□□□□□ -0.59
RPAIN-212ENST00000573126 NXNL1Q96CM4 212 aa11.38□□□□□ -0.59
RPAIN-212ENST00000573126 TUBGCP5Q96RT8 1024 aa11.38□□□□□ -0.59
RPAIN-212ENST00000573126 TBL1YQ9BQ87 522 aa11.38□□□□□ -0.59
RPAIN-212ENST00000573126 KATNAL1Q9BW62 490 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms