RNA–Protein interactions for RNA: ENST00000572656.2

TRAPPC1-205, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 409 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-205ENST00000572656 ERBB2P04626 1255 aa10.09□□□□□ -0.79
TRAPPC1-205ENST00000572656 MPOP05164 745 aa10.09□□□□□ -0.79
TRAPPC1-205ENST00000572656 SLC9A1P19634 815 aa10.09□□□□□ -0.79
TRAPPC1-205ENST00000572656 CXCR3P49682 368 aa10.09□□□□□ -0.79
TRAPPC1-205ENST00000572656 TMPRSS3P57727 454 aa10.09□□□□□ -0.79
TRAPPC1-205ENST00000572656 CLDN2P57739 230 aa10.09□□□□□ -0.79
TRAPPC1-205ENST00000572656 ERVPABLB-1P60509 514 aa10.09□□□□□ -0.79
TRAPPC1-205ENST00000572656 HNRNPKP61978 463 aaKnown RBP eCLIP10.09□□□□□ -0.79
TRAPPC1-205ENST00000572656 GABREP78334 506 aa10.09□□□□□ -0.79
TRAPPC1-205ENST00000572656 RHDQ02161 417 aa10.09□□□□□ -0.79
TRAPPC1-205ENST00000572656 PAK1Q13153 545 aa10.09□□□□□ -0.79
TRAPPC1-205ENST00000572656 ALFQ53S48 1182 aa10.09□□□□□ -0.79
TRAPPC1-205ENST00000572656 ARSIQ5FYB1 569 aa10.09□□□□□ -0.79
TRAPPC1-205ENST00000572656 BRMS1LQ5PSV4 323 aa10.09□□□□□ -0.79
TRAPPC1-205ENST00000572656 OTUD1Q5VV17 481 aaPredicted RBP10.09□□□□□ -0.79
TRAPPC1-205ENST00000572656 SEL1L3Q68CR1 1132 aa10.09□□□□□ -0.79
TRAPPC1-205ENST00000572656 GJB7Q6PEY0 223 aa10.09□□□□□ -0.79
TRAPPC1-205ENST00000572656 LRRC31Q6UY01 552 aa10.09□□□□□ -0.79
TRAPPC1-205ENST00000572656 Q6ZSR6 202 aa10.09□□□□□ -0.79
TRAPPC1-205ENST00000572656 PASD1Q8IV76 773 aa10.09□□□□□ -0.79
TRAPPC1-205ENST00000572656 ZNF683Q8IZ20 524 aa10.09□□□□□ -0.79
TRAPPC1-205ENST00000572656 DCAF4L2Q8NA75 395 aa10.09□□□□□ -0.79
TRAPPC1-205ENST00000572656 CHST14Q8NCH0 376 aa10.09□□□□□ -0.79
TRAPPC1-205ENST00000572656 C1orf131Q8NDD1 294 aaKnown RBP10.09□□□□□ -0.79
TRAPPC1-205ENST00000572656 SHC3Q92529 594 aa10.09□□□□□ -0.79
TRAPPC1-205ENST00000572656 WBP1Q96G27 269 aa10.09□□□□□ -0.79
TRAPPC1-205ENST00000572656 NAF1Q96HR8 494 aaKnown RBP10.09□□□□□ -0.79
TRAPPC1-205ENST00000572656 PPP1R16AQ96I34 528 aa10.09□□□□□ -0.79
TRAPPC1-205ENST00000572656 BMFQ96LC9 184 aa10.09□□□□□ -0.79
TRAPPC1-205ENST00000572656 C1orf74Q96LT6 269 aa10.09□□□□□ -0.79
TRAPPC1-205ENST00000572656 NPY6RQ99463 290 aa10.09□□□□□ -0.79
TRAPPC1-205ENST00000572656 TKTL2Q9H0I9 626 aa10.09□□□□□ -0.79
TRAPPC1-205ENST00000572656 OSBPL2Q9H1P3 480 aa10.09□□□□□ -0.79
TRAPPC1-205ENST00000572656 WDCPQ9H6R7 721 aa10.09□□□□□ -0.79
TRAPPC1-205ENST00000572656 CAAP1Q9H8G2 361 aa10.09□□□□□ -0.79
TRAPPC1-205ENST00000572656 POLR1BQ9H9Y6 1135 aa10.09□□□□□ -0.79
TRAPPC1-205ENST00000572656 GPR27Q9NS67 375 aa10.09□□□□□ -0.79
TRAPPC1-205ENST00000572656 PIGVQ9NUD9 493 aa10.09□□□□□ -0.79
TRAPPC1-205ENST00000572656 DNAJC28Q9NX36 388 aa10.09□□□□□ -0.79
TRAPPC1-205ENST00000572656 APEX2Q9UBZ4 518 aa10.09□□□□□ -0.79
TRAPPC1-205ENST00000572656 IL36AQ9UHA7 158 aa10.09□□□□□ -0.79
TRAPPC1-205ENST00000572656 U3KQA8 63 aa10.09□□□□□ -0.79
TRAPPC1-205ENST00000572656 ASH1LQ9NR48 2969 aaKnown RBP10.09□□□□□ -0.79
TRAPPC1-205ENST00000572656 A0A0D9SEW6 157 aa10.08□□□□□ -0.8
TRAPPC1-205ENST00000572656 K7ESM1 405 aa10.08□□□□□ -0.8
TRAPPC1-205ENST00000572656 RNF103O00237 685 aa10.08□□□□□ -0.8
TRAPPC1-205ENST00000572656 BIN1O00499 593 aa10.08□□□□□ -0.8
TRAPPC1-205ENST00000572656 RIOK3O14730 519 aaKnown RBP10.08□□□□□ -0.8
TRAPPC1-205ENST00000572656 LZTS3O60299 673 aaPredicted RBP10.08□□□□□ -0.8
TRAPPC1-205ENST00000572656 LEFTY1O75610 366 aa10.08□□□□□ -0.8
TRAPPC1-205ENST00000572656 F9P00740 461 aa10.08□□□□□ -0.8
TRAPPC1-205ENST00000572656 CSF2P04141 144 aa10.08□□□□□ -0.8
TRAPPC1-205ENST00000572656 MYF5P13349 255 aa10.08□□□□□ -0.8
TRAPPC1-205ENST00000572656 KRT9P35527 623 aa10.08□□□□□ -0.8
TRAPPC1-205ENST00000572656 RECQLP46063 649 aaPredicted RBP10.08□□□□□ -0.8
TRAPPC1-205ENST00000572656 NEK3P51956 506 aa10.08□□□□□ -0.8
TRAPPC1-205ENST00000572656 RPS21P63220 83 aaKnown RBP10.08□□□□□ -0.8
TRAPPC1-205ENST00000572656 APBA1Q02410 837 aa10.08□□□□□ -0.8
TRAPPC1-205ENST00000572656 PTK2Q05397 1052 aa10.08□□□□□ -0.8
TRAPPC1-205ENST00000572656 FZD2Q14332 565 aa10.08□□□□□ -0.8
TRAPPC1-205ENST00000572656 TAF1BQ53T94 588 aaPredicted RBP10.08□□□□□ -0.8
TRAPPC1-205ENST00000572656 ZNF542PQ5EBM4 170 aa10.08□□□□□ -0.8
TRAPPC1-205ENST00000572656 ACBD5Q5T8D3 534 aaPredicted RBP10.08□□□□□ -0.8
TRAPPC1-205ENST00000572656 KIAA1161Q6NSJ0 714 aa10.08□□□□□ -0.8
TRAPPC1-205ENST00000572656 C22orf39Q6P5X5 142 aa10.08□□□□□ -0.8
TRAPPC1-205ENST00000572656 LINGO4Q6UY18 593 aa10.08□□□□□ -0.8
TRAPPC1-205ENST00000572656 KYAT3Q6YP21 454 aaKnown RBP10.08□□□□□ -0.8
TRAPPC1-205ENST00000572656 DPY19L3Q6ZPD9 716 aa10.08□□□□□ -0.8
TRAPPC1-205ENST00000572656 PTAR1Q7Z6K3 402 aaPredicted RBP10.08□□□□□ -0.8
TRAPPC1-205ENST00000572656 ZDHHC17Q8IUH5 632 aa10.08□□□□□ -0.8
TRAPPC1-205ENST00000572656 IFI44Q8TCB0 444 aa10.08□□□□□ -0.8
TRAPPC1-205ENST00000572656 GRIN3AQ8TCU5 1115 aa10.08□□□□□ -0.8
TRAPPC1-205ENST00000572656 MAPK15Q8TD08 544 aa10.08□□□□□ -0.8
TRAPPC1-205ENST00000572656 KCNE4Q8WWG9 221 aa10.08□□□□□ -0.8
TRAPPC1-205ENST00000572656 NT5C3BQ969T7 300 aa10.08□□□□□ -0.8
TRAPPC1-205ENST00000572656 GRAMD1AQ96CP6 724 aa10.08□□□□□ -0.8
TRAPPC1-205ENST00000572656 PGAP3Q96FM1 320 aaPredicted RBP10.08□□□□□ -0.8
TRAPPC1-205ENST00000572656 FEM1CQ96JP0 617 aa10.08□□□□□ -0.8
TRAPPC1-205ENST00000572656 SLC17A9Q9BYT1 436 aa10.08□□□□□ -0.8
TRAPPC1-205ENST00000572656 DPH1Q9BZG8 443 aa10.08□□□□□ -0.8
TRAPPC1-205ENST00000572656 TNKS2Q9H2K2 1166 aa10.08□□□□□ -0.8
TRAPPC1-205ENST00000572656 SYNCQ9H7C4 482 aa10.08□□□□□ -0.8
TRAPPC1-205ENST00000572656 ANLNQ9NQW6 1124 aa10.08□□□□□ -0.8
TRAPPC1-205ENST00000572656 THSD1Q9NS62 852 aa10.08□□□□□ -0.8
TRAPPC1-205ENST00000572656 TMEM51Q9NW97 253 aa10.08□□□□□ -0.8
TRAPPC1-205ENST00000572656 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.08□□□□□ -0.8
TRAPPC1-205ENST00000572656 NCKIPSDQ9NZQ3 722 aa10.08□□□□□ -0.8
TRAPPC1-205ENST00000572656 PAXBP1Q9Y5B6 917 aa10.08□□□□□ -0.8
TRAPPC1-205ENST00000572656 CSNK1G3Q9Y6M4 447 aa10.08□□□□□ -0.8
TRAPPC1-205ENST00000572656 WASF2Q9Y6W5 498 aa10.08□□□□□ -0.8
TRAPPC1-205ENST00000572656 GOLGA4Q13439 2230 aaKnown RBP10.08□□□□□ -0.8
TRAPPC1-205ENST00000572656 FLNBO75369 2602 aaKnown RBP10.07□□□□□ -0.8
TRAPPC1-205ENST00000572656 IGLV3-10A0A075B6K4 115 aa10.07□□□□□ -0.8
TRAPPC1-205ENST00000572656 SPTY2D1-AS1A0A0U1RR47 76 aa10.07□□□□□ -0.8
TRAPPC1-205ENST00000572656 ILVBLA1L0T0 632 aa10.07□□□□□ -0.8
TRAPPC1-205ENST00000572656 POM121BA6NF01 834 aa10.07□□□□□ -0.8
TRAPPC1-205ENST00000572656 I6L893 689 aaPredicted RBP10.07□□□□□ -0.8
TRAPPC1-205ENST00000572656 AP1G1O43747 822 aa10.07□□□□□ -0.8
TRAPPC1-205ENST00000572656 ZNF821O75541 412 aaPredicted RBP10.07□□□□□ -0.8
TRAPPC1-205ENST00000572656 NEBLO76041 1014 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms