RNA–Protein interactions for RNA: ENST00000571249.1

CHD3-213, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-213ENST00000571249 IL1BP01584 269 aa7.13□□□□□ -1.27
CHD3-213ENST00000571249 CSF2P04141 144 aa7.13□□□□□ -1.27
CHD3-213ENST00000571249 TCN2P20062 427 aa7.13□□□□□ -1.27
CHD3-213ENST00000571249 HOXD9P28356 352 aaPredicted RBP7.13□□□□□ -1.27
CHD3-213ENST00000571249 GNA15P30679 374 aa7.13□□□□□ -1.27
CHD3-213ENST00000571249 CD70P32970 193 aa7.13□□□□□ -1.27
CHD3-213ENST00000571249 DRD3P35462 400 aa7.13□□□□□ -1.27
CHD3-213ENST00000571249 PKP1Q13835 747 aa7.13□□□□□ -1.27
CHD3-213ENST00000571249 FZD2Q14332 565 aa7.13□□□□□ -1.27
CHD3-213ENST00000571249 TCEAL1Q15170 157 aa7.13□□□□□ -1.27
CHD3-213ENST00000571249 ME3Q16798 604 aa7.13□□□□□ -1.27
CHD3-213ENST00000571249 BMT2Q1RMZ1 405 aa7.13□□□□□ -1.27
CHD3-213ENST00000571249 MIIPQ5JXC2 388 aa7.13□□□□□ -1.27
CHD3-213ENST00000571249 CCDC181Q5TID7 509 aa7.13□□□□□ -1.27
CHD3-213ENST00000571249 SLFN12LQ6IEE8 588 aa7.13□□□□□ -1.27
CHD3-213ENST00000571249 KLHDC10Q6PID8 442 aa7.13□□□□□ -1.27
CHD3-213ENST00000571249 Q6ZSR6 202 aa7.13□□□□□ -1.27
CHD3-213ENST00000571249 ZNF438Q7Z4V0 828 aa7.13□□□□□ -1.27
CHD3-213ENST00000571249 KIAA0907Q7Z7F0 614 aaPredicted RBP7.13□□□□□ -1.27
CHD3-213ENST00000571249 FAM35AQ86V20 835 aa7.13□□□□□ -1.27
CHD3-213ENST00000571249 TRIM69Q86WT6 500 aa7.13□□□□□ -1.27
CHD3-213ENST00000571249 TGIF2LYQ8IUE0 185 aa7.13□□□□□ -1.27
CHD3-213ENST00000571249 CPXM2Q8N436 756 aa7.13□□□□□ -1.27
CHD3-213ENST00000571249 DDX51Q8N8A6 666 aaKnown RBP eCLIP7.13□□□□□ -1.27
CHD3-213ENST00000571249 SYT2Q8N9I0 419 aaPredicted RBP7.13□□□□□ -1.27
CHD3-213ENST00000571249 STARD8Q92502 1023 aa7.13□□□□□ -1.27
CHD3-213ENST00000571249 MRFAP1L1Q96HT8 127 aa7.13□□□□□ -1.27
CHD3-213ENST00000571249 IL12RB2Q99665 862 aa7.13□□□□□ -1.27
CHD3-213ENST00000571249 FAM213AQ9BRX8 229 aa7.13□□□□□ -1.27
CHD3-213ENST00000571249 TRIM55Q9BYV6 548 aa7.13□□□□□ -1.27
CHD3-213ENST00000571249 MTMR12Q9C0I1 747 aa7.13□□□□□ -1.27
CHD3-213ENST00000571249 NIF3L1Q9GZT8 377 aa7.13□□□□□ -1.27
CHD3-213ENST00000571249 IKZF4Q9H2S9 585 aa7.13□□□□□ -1.27
CHD3-213ENST00000571249 LRRN3Q9H3W5 708 aa7.13□□□□□ -1.27
CHD3-213ENST00000571249 FBXO44Q9H4M3 255 aa7.13□□□□□ -1.27
CHD3-213ENST00000571249 MTPAPQ9NVV4 582 aaKnown RBP eCLIP7.13□□□□□ -1.27
CHD3-213ENST00000571249 ZNF358Q9NW07 568 aa7.13□□□□□ -1.27
CHD3-213ENST00000571249 STIM2Q9P246 746 aa7.13□□□□□ -1.27
CHD3-213ENST00000571249 COPG2Q9UBF2 871 aa7.13□□□□□ -1.27
CHD3-213ENST00000571249 RASAL2Q9UJF2 1139 aa7.13□□□□□ -1.27
CHD3-213ENST00000571249 CROTQ9UKG9 612 aa7.13□□□□□ -1.27
CHD3-213ENST00000571249 STYXL1Q9Y6J8 313 aa7.13□□□□□ -1.27
CHD3-213ENST00000571249 RNF215Q9Y6U7 377 aa7.13□□□□□ -1.27
CHD3-213ENST00000571249 CNTRLQ7Z7A1 2325 aa7.12□□□□□ -1.27
CHD3-213ENST00000571249 MYO7BQ6PIF6 2116 aa7.12□□□□□ -1.27
CHD3-213ENST00000571249 ATP8B3O60423 1300 aa7.12□□□□□ -1.27
CHD3-213ENST00000571249 VWA3AA6NCI4 1184 aa7.12□□□□□ -1.27
CHD3-213ENST00000571249 PP2D1A8MPX8 630 aa7.12□□□□□ -1.27
CHD3-213ENST00000571249 A8MXQ7 604 aa7.12□□□□□ -1.27
CHD3-213ENST00000571249 TTC34A8MYJ7 566 aa7.12□□□□□ -1.27
CHD3-213ENST00000571249 ESPNB1AK53 854 aa7.12□□□□□ -1.27
CHD3-213ENST00000571249 H3BM21 787 aa7.12□□□□□ -1.27
CHD3-213ENST00000571249 TPP1O14773 563 aa7.12□□□□□ -1.27
CHD3-213ENST00000571249 CAPN5O15484 640 aaPredicted RBP7.12□□□□□ -1.27
CHD3-213ENST00000571249 PLRG1O43660 514 aaKnown RBP7.12□□□□□ -1.27
CHD3-213ENST00000571249 RFPL1O75677 317 aa7.12□□□□□ -1.27
CHD3-213ENST00000571249 CDKL5O76039 1030 aa7.12□□□□□ -1.27
CHD3-213ENST00000571249 F9P00740 461 aa7.12□□□□□ -1.27
CHD3-213ENST00000571249 TMEM191BP0C7N4 346 aa7.12□□□□□ -1.27
CHD3-213ENST00000571249 FGF3P11487 239 aaPredicted RBP7.12□□□□□ -1.27
CHD3-213ENST00000571249 COX6B1P14854 86 aa7.12□□□□□ -1.27
CHD3-213ENST00000571249 CAPN3P20807 821 aa7.12□□□□□ -1.27
CHD3-213ENST00000571249 F8A1P23610 371 aa7.12□□□□□ -1.27
CHD3-213ENST00000571249 HNRNPH3P31942 346 aaKnown RBP7.12□□□□□ -1.27
CHD3-213ENST00000571249 DEKP35659 375 aaKnown RBP7.12□□□□□ -1.27
CHD3-213ENST00000571249 ADKP55263 362 aaKnown RBP7.12□□□□□ -1.27
CHD3-213ENST00000571249 COG7P83436 770 aa7.12□□□□□ -1.27
CHD3-213ENST00000571249 ZRSR1Q15695 479 aaKnown RBP7.12□□□□□ -1.27
CHD3-213ENST00000571249 MSS51Q4VC12 460 aa7.12□□□□□ -1.27
CHD3-213ENST00000571249 MPPE1Q53F39 396 aa7.12□□□□□ -1.27
CHD3-213ENST00000571249 TPRG1LQ5T0D9 272 aa7.12□□□□□ -1.27
CHD3-213ENST00000571249 PHF19Q5T6S3 580 aa7.12□□□□□ -1.27
CHD3-213ENST00000571249 JMJD6Q6NYC1 403 aaPredicted RBP7.12□□□□□ -1.27
CHD3-213ENST00000571249 LINGO4Q6UY18 593 aa7.12□□□□□ -1.27
CHD3-213ENST00000571249 PAQR9Q6ZVX9 377 aa7.12□□□□□ -1.27
CHD3-213ENST00000571249 DIS3L2Q8IYB7 885 aaKnown RBP7.12□□□□□ -1.27
CHD3-213ENST00000571249 RBFAQ8N0V3 343 aa7.12□□□□□ -1.27
CHD3-213ENST00000571249 STK40Q8N2I9 435 aa7.12□□□□□ -1.27
CHD3-213ENST00000571249 MYCT1Q8N699 235 aa7.12□□□□□ -1.27
CHD3-213ENST00000571249 B3GALNT2Q8NCR0 500 aa7.12□□□□□ -1.27
CHD3-213ENST00000571249 RCBTB1Q8NDN9 531 aa7.12□□□□□ -1.27
CHD3-213ENST00000571249 ZMIZ2Q8NF64 920 aa7.12□□□□□ -1.27
CHD3-213ENST00000571249 POMGNT1Q8WZA1 660 aa7.12□□□□□ -1.27
CHD3-213ENST00000571249 TMEM159Q96B96 161 aa7.12□□□□□ -1.27
CHD3-213ENST00000571249 SNRNP40Q96DI7 357 aaKnown RBP7.12□□□□□ -1.27
CHD3-213ENST00000571249 ZNF274Q96GC6 653 aaPredicted RBP7.12□□□□□ -1.27
CHD3-213ENST00000571249 LLPHQ9BRT6 129 aaKnown RBP7.12□□□□□ -1.27
CHD3-213ENST00000571249 SLAMF7Q9NQ25 335 aa7.12□□□□□ -1.27
CHD3-213ENST00000571249 DLL4Q9NR61 685 aa7.12□□□□□ -1.27
CHD3-213ENST00000571249 KCTD3Q9Y597 815 aa7.12□□□□□ -1.27
CHD3-213ENST00000571249 OAS3Q9Y6K5 1087 aaKnown RBP7.12□□□□□ -1.27
CHD3-213ENST00000571249 YY2O15391 372 aa7.11□□□□□ -1.27
CHD3-213ENST00000571249 SLC7A4O43246 635 aa7.11□□□□□ -1.27
CHD3-213ENST00000571249 SPINT1O43278 529 aa7.11□□□□□ -1.27
CHD3-213ENST00000571249 PFKFB2O60825 505 aa7.11□□□□□ -1.27
CHD3-213ENST00000571249 TACC1O75410 805 aa7.11□□□□□ -1.27
CHD3-213ENST00000571249 BEST1O76090 585 aa7.11□□□□□ -1.27
CHD3-213ENST00000571249 CELA2BP08218 269 aaPredicted RBP7.11□□□□□ -1.27
CHD3-213ENST00000571249 PLA2G4BP0C869 781 aa7.11□□□□□ -1.27
CHD3-213ENST00000571249 NME1P15531 152 aaKnown RBP7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms