RNA–Protein interactions for RNA: ENST00000570385.1

CTDNEP1-203, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-203ENST00000570385 C5orf22Q49AR2 442 aa8.8□□□□□ -1
CTDNEP1-203ENST00000570385 VWA3BQ502W6 1294 aa8.8□□□□□ -1
CTDNEP1-203ENST00000570385 RAB6CQ53S08 254 aa8.8□□□□□ -1
CTDNEP1-203ENST00000570385 BRMS1LQ5PSV4 323 aa8.8□□□□□ -1
CTDNEP1-203ENST00000570385 TRNP1Q6NT89 227 aa8.8□□□□□ -1
CTDNEP1-203ENST00000570385 DPY19L2P1Q6NXN4 242 aa8.8□□□□□ -1
CTDNEP1-203ENST00000570385 C22orf39Q6P5X5 142 aa8.8□□□□□ -1
CTDNEP1-203ENST00000570385 LRRC31Q6UY01 552 aa8.8□□□□□ -1
CTDNEP1-203ENST00000570385 DPY19L3Q6ZPD9 716 aa8.8□□□□□ -1
CTDNEP1-203ENST00000570385 Q6ZSR6 202 aa8.8□□□□□ -1
CTDNEP1-203ENST00000570385 ERN2Q76MJ5 926 aaKnown RBP8.8□□□□□ -1
CTDNEP1-203ENST00000570385 ERICH1Q86X53 443 aa8.8□□□□□ -1
CTDNEP1-203ENST00000570385 FAM131BQ86XD5 332 aa8.8□□□□□ -1
CTDNEP1-203ENST00000570385 XYLT1Q86Y38 959 aa8.8□□□□□ -1
CTDNEP1-203ENST00000570385 DRC7Q8IY82 874 aa8.8□□□□□ -1
CTDNEP1-203ENST00000570385 FAM71AQ8IYT1 594 aa8.8□□□□□ -1
CTDNEP1-203ENST00000570385 SLC22A18ASQ8N1D0 253 aa8.8□□□□□ -1
CTDNEP1-203ENST00000570385 DCAF4L2Q8NA75 395 aa8.8□□□□□ -1
CTDNEP1-203ENST00000570385 TMEM35BQ8NCS4 154 aa8.8□□□□□ -1
CTDNEP1-203ENST00000570385 ZNF397Q8NF99 534 aaPredicted RBP8.8□□□□□ -1
CTDNEP1-203ENST00000570385 OR6K2Q8NGY2 324 aa8.8□□□□□ -1
CTDNEP1-203ENST00000570385 CPA5Q8WXQ8 436 aa8.8□□□□□ -1
CTDNEP1-203ENST00000570385 C18orf8Q96DM3 657 aa8.8□□□□□ -1
CTDNEP1-203ENST00000570385 NAF1Q96HR8 494 aaKnown RBP8.8□□□□□ -1
CTDNEP1-203ENST00000570385 CCDC114Q96M63 670 aa8.8□□□□□ -1
CTDNEP1-203ENST00000570385 CFAP57Q96MR6 1250 aa8.8□□□□□ -1
CTDNEP1-203ENST00000570385 MAGEB5Q9BZ81 275 aa8.8□□□□□ -1
CTDNEP1-203ENST00000570385 RAB6CQ9H0N0 254 aa8.8□□□□□ -1
CTDNEP1-203ENST00000570385 NDST4Q9H3R1 872 aa8.8□□□□□ -1
CTDNEP1-203ENST00000570385 KLHL11Q9NVR0 708 aa8.8□□□□□ -1
CTDNEP1-203ENST00000570385 DNAJC28Q9NX36 388 aa8.8□□□□□ -1
CTDNEP1-203ENST00000570385 IL36AQ9UHA7 158 aa8.8□□□□□ -1
CTDNEP1-203ENST00000570385 STAP1Q9ULZ2 295 aa8.8□□□□□ -1
CTDNEP1-203ENST00000570385 ZFR2Q9UPR6 939 aaKnown RBP8.8□□□□□ -1
CTDNEP1-203ENST00000570385 FCF1Q9Y324 198 aaKnown RBP8.8□□□□□ -1
CTDNEP1-203ENST00000570385 FHOD1Q9Y613 1164 aa8.8□□□□□ -1
CTDNEP1-203ENST00000570385 LOC400499M0QZD8 3231 aa8.79□□□□□ -1
CTDNEP1-203ENST00000570385 GTPBP10A4D1E9 387 aaKnown RBP8.79□□□□□ -1
CTDNEP1-203ENST00000570385 RAD51BO15315 384 aa8.79□□□□□ -1
CTDNEP1-203ENST00000570385 ZNF821O75541 412 aaPredicted RBP8.79□□□□□ -1
CTDNEP1-203ENST00000570385 PIAS2O75928 621 aa8.79□□□□□ -1
CTDNEP1-203ENST00000570385 GJB6O95452 261 aa8.79□□□□□ -1
CTDNEP1-203ENST00000570385 PAK4O96013 591 aaPredicted RBP8.79□□□□□ -1
CTDNEP1-203ENST00000570385 MT-CO3P00414 261 aa8.79□□□□□ -1
CTDNEP1-203ENST00000570385 PRNPP04156 253 aa8.79□□□□□ -1
CTDNEP1-203ENST00000570385 CDK4P11802 303 aa8.79□□□□□ -1
CTDNEP1-203ENST00000570385 HNRNPA2B1P22626 353 aaKnown RBP8.79□□□□□ -1
CTDNEP1-203ENST00000570385 ACP1P24666 158 aa8.79□□□□□ -1
CTDNEP1-203ENST00000570385 NUDT1P36639 197 aa8.79□□□□□ -1
CTDNEP1-203ENST00000570385 ACVRL1P37023 503 aa8.79□□□□□ -1
CTDNEP1-203ENST00000570385 BPIFB4P59827 614 aa8.79□□□□□ -1
CTDNEP1-203ENST00000570385 MTA1Q13330 715 aa8.79□□□□□ -1
CTDNEP1-203ENST00000570385 ZNF211Q13398 564 aaPredicted RBP8.79□□□□□ -1
CTDNEP1-203ENST00000570385 ILKQ13418 452 aa8.79□□□□□ -1
CTDNEP1-203ENST00000570385 FGL2Q14314 439 aa8.79□□□□□ -1
CTDNEP1-203ENST00000570385 RTP5Q14D33 572 aa8.79□□□□□ -1
CTDNEP1-203ENST00000570385 CDO1Q16878 200 aa8.79□□□□□ -1
CTDNEP1-203ENST00000570385 DPCR1Q3MIW9 517 aa8.79□□□□□ -1
CTDNEP1-203ENST00000570385 SLC25A52Q3SY17 297 aa8.79□□□□□ -1
CTDNEP1-203ENST00000570385 HS1BP3Q53T59 392 aa8.79□□□□□ -1
CTDNEP1-203ENST00000570385 MIIPQ5JXC2 388 aa8.79□□□□□ -1
CTDNEP1-203ENST00000570385 ARTNQ5T4W7 220 aa8.79□□□□□ -1
CTDNEP1-203ENST00000570385 NAA35Q5VZE5 725 aa8.79□□□□□ -1
CTDNEP1-203ENST00000570385 LEKR1Q6ZMV7 388 aa8.79□□□□□ -1
CTDNEP1-203ENST00000570385 GCNT7Q6ZNI0 430 aa8.79□□□□□ -1
CTDNEP1-203ENST00000570385 LRRC69Q6ZNQ3 347 aa8.79□□□□□ -1
CTDNEP1-203ENST00000570385 PTAR1Q7Z6K3 402 aaPredicted RBP8.79□□□□□ -1
CTDNEP1-203ENST00000570385 SETD3Q86TU7 594 aaPredicted RBP8.79□□□□□ -1
CTDNEP1-203ENST00000570385 NOP9Q86U38 636 aaKnown RBP8.79□□□□□ -1
CTDNEP1-203ENST00000570385 ZDHHC17Q8IUH5 632 aa8.79□□□□□ -1
CTDNEP1-203ENST00000570385 RYBPQ8N488 228 aaPredicted RBP8.79□□□□□ -1
CTDNEP1-203ENST00000570385 EMC1Q8N766 993 aa8.79□□□□□ -1
CTDNEP1-203ENST00000570385 MLKLQ8NB16 471 aa8.79□□□□□ -1
CTDNEP1-203ENST00000570385 NETO2Q8NC67 525 aa8.79□□□□□ -1
CTDNEP1-203ENST00000570385 TMIEQ8NEW7 156 aa8.79□□□□□ -1
CTDNEP1-203ENST00000570385 NT5C3BQ969T7 300 aa8.79□□□□□ -1
CTDNEP1-203ENST00000570385 TUBGCP2Q9BSJ2 902 aa8.79□□□□□ -1
CTDNEP1-203ENST00000570385 TM6SF2Q9BZW4 377 aa8.79□□□□□ -1
CTDNEP1-203ENST00000570385 NRSN2Q9GZP1 204 aa8.79□□□□□ -1
CTDNEP1-203ENST00000570385 ATP13A1Q9HD20 1204 aa8.79□□□□□ -1
CTDNEP1-203ENST00000570385 RRN3Q9NYV6 651 aa8.79□□□□□ -1
CTDNEP1-203ENST00000570385 PCDHB1Q9Y5F3 818 aa8.79□□□□□ -1
CTDNEP1-203ENST00000570385 WASF2Q9Y6W5 498 aa8.79□□□□□ -1
CTDNEP1-203ENST00000570385 BPTFQ12830 3046 aa8.79□□□□□ -1
CTDNEP1-203ENST00000570385 RP1P56715 2156 aa8.78□□□□□ -1
CTDNEP1-203ENST00000570385 POM121BA6NF01 834 aa8.78□□□□□ -1
CTDNEP1-203ENST00000570385 RRP8O43159 456 aaKnown RBP8.78□□□□□ -1
CTDNEP1-203ENST00000570385 ZMPSTE24O75844 475 aa8.78□□□□□ -1
CTDNEP1-203ENST00000570385 F9P00740 461 aa8.78□□□□□ -1
CTDNEP1-203ENST00000570385 MPOP05164 745 aa8.78□□□□□ -1
CTDNEP1-203ENST00000570385 MMEP08473 750 aa8.78□□□□□ -1
CTDNEP1-203ENST00000570385 GIMD1P0DJR0 217 aa8.78□□□□□ -1
CTDNEP1-203ENST00000570385 CDH5P33151 784 aaPredicted RBP8.78□□□□□ -1
CTDNEP1-203ENST00000570385 GABRB2P47870 512 aa8.78□□□□□ -1
CTDNEP1-203ENST00000570385 SERPINH1P50454 418 aaKnown RBP8.78□□□□□ -1
CTDNEP1-203ENST00000570385 CLCN6P51797 869 aa8.78□□□□□ -1
CTDNEP1-203ENST00000570385 CCNHP51946 323 aaPredicted RBP8.78□□□□□ -1
CTDNEP1-203ENST00000570385 NEK3P51956 506 aa8.78□□□□□ -1
CTDNEP1-203ENST00000570385 UBE2HP62256 183 aa8.78□□□□□ -1
CTDNEP1-203ENST00000570385 ARF5P84085 180 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms