RNA–Protein interactions for RNA: ENST00000570380.5

CTDNEP1-202, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 506 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-202ENST00000570380 PDXKO00764 312 aa10.69□□□□□ -0.7
CTDNEP1-202ENST00000570380 MAPK13O15264 365 aa10.69□□□□□ -0.7
CTDNEP1-202ENST00000570380 SPTLC2O15270 562 aa10.69□□□□□ -0.7
CTDNEP1-202ENST00000570380 YY2O15391 372 aa10.69□□□□□ -0.7
CTDNEP1-202ENST00000570380 CCKBRP32239 447 aa10.69□□□□□ -0.7
CTDNEP1-202ENST00000570380 CHRNA3P32297 505 aa10.69□□□□□ -0.7
CTDNEP1-202ENST00000570380 ETV5P41161 510 aa10.69□□□□□ -0.7
CTDNEP1-202ENST00000570380 RABIFP47224 123 aa10.69□□□□□ -0.7
CTDNEP1-202ENST00000570380 CCL7P80098 99 aa10.69□□□□□ -0.7
CTDNEP1-202ENST00000570380 NUCB2P80303 420 aa10.69□□□□□ -0.7
CTDNEP1-202ENST00000570380 CCDC15Q0P6D6 951 aa10.69□□□□□ -0.7
CTDNEP1-202ENST00000570380 PRRT3Q5FWE3 981 aa10.69□□□□□ -0.7
CTDNEP1-202ENST00000570380 PMF1Q6P1K2 205 aa10.69□□□□□ -0.7
CTDNEP1-202ENST00000570380 ERN2Q76MJ5 926 aaKnown RBP10.69□□□□□ -0.7
CTDNEP1-202ENST00000570380 CHSY1Q86X52 802 aa10.69□□□□□ -0.7
CTDNEP1-202ENST00000570380 SH2D3CQ8N5H7 860 aa10.69□□□□□ -0.7
CTDNEP1-202ENST00000570380 OR52K2Q8NGK3 314 aa10.69□□□□□ -0.7
CTDNEP1-202ENST00000570380 SLC35F5Q8WV83 523 aa10.69□□□□□ -0.7
CTDNEP1-202ENST00000570380 EEF2KMTQ96G04 330 aa10.69□□□□□ -0.7
CTDNEP1-202ENST00000570380 SERPINB11Q96P15 392 aa10.69□□□□□ -0.7
CTDNEP1-202ENST00000570380 GFM1Q96RP9 751 aaKnown RBP10.69□□□□□ -0.7
CTDNEP1-202ENST00000570380 KLF6Q99612 283 aaPredicted RBP10.69□□□□□ -0.7
CTDNEP1-202ENST00000570380 FEM1AQ9BSK4 669 aa10.69□□□□□ -0.7
CTDNEP1-202ENST00000570380 TMEM8AQ9HCN3 771 aa10.69□□□□□ -0.7
CTDNEP1-202ENST00000570380 PNMA8BQ9ULN7 279 aaPredicted RBP10.69□□□□□ -0.7
CTDNEP1-202ENST00000570380 NAALADL1Q9UQQ1 740 aa10.69□□□□□ -0.7
CTDNEP1-202ENST00000570380 LOXL2Q9Y4K0 774 aa10.69□□□□□ -0.7
CTDNEP1-202ENST00000570380 PCDHB11Q9Y5F2 797 aa10.69□□□□□ -0.7
CTDNEP1-202ENST00000570380 MED13Q9UHV7 2174 aa10.69□□□□□ -0.7
CTDNEP1-202ENST00000570380 ABCA12Q86UK0 2595 aa10.68□□□□□ -0.7
CTDNEP1-202ENST00000570380 C9orf172C9J069 976 aa10.68□□□□□ -0.7
CTDNEP1-202ENST00000570380 O00370 1275 aa10.68□□□□□ -0.7
CTDNEP1-202ENST00000570380 KLRC4O43908 158 aa10.68□□□□□ -0.7
CTDNEP1-202ENST00000570380 MT-CO1P00395 513 aa10.68□□□□□ -0.7
CTDNEP1-202ENST00000570380 ANXA6P08133 673 aa10.68□□□□□ -0.7
CTDNEP1-202ENST00000570380 SETSIPP0DME0 302 aa10.68□□□□□ -0.7
CTDNEP1-202ENST00000570380 PDIA4P13667 645 aaKnown RBP10.68□□□□□ -0.7
CTDNEP1-202ENST00000570380 CD19P15391 556 aa10.68□□□□□ -0.7
CTDNEP1-202ENST00000570380 RPS21P63220 83 aaKnown RBP10.68□□□□□ -0.7
CTDNEP1-202ENST00000570380 NNTQ13423 1086 aa10.68□□□□□ -0.7
CTDNEP1-202ENST00000570380 ZC3H12AQ5D1E8 599 aaKnown RBP10.68□□□□□ -0.7
CTDNEP1-202ENST00000570380 CRYBG3Q68DQ2 2970 aa10.68□□□□□ -0.7
CTDNEP1-202ENST00000570380 SHC4Q6S5L8 630 aa10.68□□□□□ -0.7
CTDNEP1-202ENST00000570380 INTS8Q75QN2 995 aaKnown RBP10.68□□□□□ -0.7
CTDNEP1-202ENST00000570380 TAC4Q86UU9 113 aa10.68□□□□□ -0.7
CTDNEP1-202ENST00000570380 SDR16C5Q8N3Y7 309 aa10.68□□□□□ -0.7
CTDNEP1-202ENST00000570380 TMIEQ8NEW7 156 aa10.68□□□□□ -0.7
CTDNEP1-202ENST00000570380 OR2A12Q8NGT7 310 aa10.68□□□□□ -0.7
CTDNEP1-202ENST00000570380 BTN2A2Q8WVV5 523 aa10.68□□□□□ -0.7
CTDNEP1-202ENST00000570380 USP7Q93009 1102 aa10.68□□□□□ -0.7
CTDNEP1-202ENST00000570380 CCDC74AQ96AQ1 378 aa10.68□□□□□ -0.7
CTDNEP1-202ENST00000570380 MIB2Q96AX9 1013 aa10.68□□□□□ -0.7
CTDNEP1-202ENST00000570380 TMEM74Q96NL1 305 aa10.68□□□□□ -0.7
CTDNEP1-202ENST00000570380 PRMT1Q99873 361 aaKnown RBP10.68□□□□□ -0.7
CTDNEP1-202ENST00000570380 LRRC61Q9BV99 259 aa10.68□□□□□ -0.7
CTDNEP1-202ENST00000570380 HDAC8Q9BY41 377 aa10.68□□□□□ -0.7
CTDNEP1-202ENST00000570380 CLPBQ9H078 707 aa10.68□□□□□ -0.7
CTDNEP1-202ENST00000570380 ZNF71Q9NQZ8 489 aaPredicted RBP10.68□□□□□ -0.7
CTDNEP1-202ENST00000570380 GULP1Q9UBP9 304 aa10.68□□□□□ -0.7
CTDNEP1-202ENST00000570380 APOBEC3BQ9UH17 382 aaKnown RBP10.68□□□□□ -0.7
CTDNEP1-202ENST00000570380 TUBD1Q9UJT1 453 aa10.68□□□□□ -0.7
CTDNEP1-202ENST00000570380 SRPK3Q9UPE1 567 aa10.68□□□□□ -0.7
CTDNEP1-202ENST00000570380 OR51B4Q9Y5P0 310 aa10.68□□□□□ -0.7
CTDNEP1-202ENST00000570380 LRBAP50851 2863 aa10.67□□□□□ -0.7
CTDNEP1-202ENST00000570380 A0A1W2PQ27 194 aa10.67□□□□□ -0.7
CTDNEP1-202ENST00000570380 A0A1W2PQ64 194 aa10.67□□□□□ -0.7
CTDNEP1-202ENST00000570380 A0A1W2PQC6 194 aa10.67□□□□□ -0.7
CTDNEP1-202ENST00000570380 F5H5T6 163 aa10.67□□□□□ -0.7
CTDNEP1-202ENST00000570380 FPGTO14772 594 aa10.67□□□□□ -0.7
CTDNEP1-202ENST00000570380 POLR2DO15514 142 aaKnown RBP10.67□□□□□ -0.7
CTDNEP1-202ENST00000570380 RPLP0P05388 317 aaKnown RBP10.67□□□□□ -0.7
CTDNEP1-202ENST00000570380 CELA2BP08218 269 aaPredicted RBP10.67□□□□□ -0.7
CTDNEP1-202ENST00000570380 VDRP11473 427 aa10.67□□□□□ -0.7
CTDNEP1-202ENST00000570380 SRCP12931 536 aa10.67□□□□□ -0.7
CTDNEP1-202ENST00000570380 TSHRP16473 764 aa10.67□□□□□ -0.7
CTDNEP1-202ENST00000570380 NOS2P35228 1153 aa10.67□□□□□ -0.7
CTDNEP1-202ENST00000570380 NASPP49321 788 aaPredicted RBP10.67□□□□□ -0.7
CTDNEP1-202ENST00000570380 PFN3P60673 137 aa10.67□□□□□ -0.7
CTDNEP1-202ENST00000570380 STK38Q15208 465 aa10.67□□□□□ -0.7
CTDNEP1-202ENST00000570380 ARSIQ5FYB1 569 aa10.67□□□□□ -0.7
CTDNEP1-202ENST00000570380 SYPL2Q5VXT5 272 aa10.67□□□□□ -0.7
CTDNEP1-202ENST00000570380 KRT39Q6A163 491 aa10.67□□□□□ -0.7
CTDNEP1-202ENST00000570380 KIAA1161Q6NSJ0 714 aa10.67□□□□□ -0.7
CTDNEP1-202ENST00000570380 ESRP1Q6NXG1 681 aaKnown RBP10.67□□□□□ -0.7
CTDNEP1-202ENST00000570380 LCLAT1Q6UWP7 414 aa10.67□□□□□ -0.7
CTDNEP1-202ENST00000570380 GRAMD1CQ8IYS0 662 aa10.67□□□□□ -0.7
CTDNEP1-202ENST00000570380 PHACTR4Q8IZ21 702 aa10.67□□□□□ -0.7
CTDNEP1-202ENST00000570380 KYQ8NBH2 561 aa10.67□□□□□ -0.7
CTDNEP1-202ENST00000570380 CHST14Q8NCH0 376 aa10.67□□□□□ -0.7
CTDNEP1-202ENST00000570380 LINC00301Q8NCQ3 95 aa10.67□□□□□ -0.7
CTDNEP1-202ENST00000570380 FBXL13Q8NEE6 735 aa10.67□□□□□ -0.7
CTDNEP1-202ENST00000570380 JPH3Q8WXH2 748 aaPredicted RBP10.67□□□□□ -0.7
CTDNEP1-202ENST00000570380 TFAP2BQ92481 460 aa10.67□□□□□ -0.7
CTDNEP1-202ENST00000570380 BTN2A3PQ96KV6 586 aa10.67□□□□□ -0.7
CTDNEP1-202ENST00000570380 LENG8Q96PV6 779 aaPredicted RBP10.67□□□□□ -0.7
CTDNEP1-202ENST00000570380 SRRTQ9BXP5 876 aaKnown RBP10.67□□□□□ -0.7
CTDNEP1-202ENST00000570380 CPEB1Q9BZB8 566 aaKnown RBP10.67□□□□□ -0.7
CTDNEP1-202ENST00000570380 MIS12Q9H081 205 aa10.67□□□□□ -0.7
CTDNEP1-202ENST00000570380 LRRN3Q9H3W5 708 aa10.67□□□□□ -0.7
CTDNEP1-202ENST00000570380 MAGEF1Q9HAY2 307 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms