RNA–Protein interactions for RNA: ENST00000569140.1

CDT1-203, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 3

Gene CDT1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-203ENST00000569140 ITM2CQ9NQX7 267 aa13.06□□□□□ -0.32
CDT1-203ENST00000569140 DYRK4Q9NR20 520 aa13.06□□□□□ -0.32
CDT1-203ENST00000569140 ETNK2Q9NVF9 386 aa13.06□□□□□ -0.32
CDT1-203ENST00000569140 FBXL12Q9NXK8 326 aa13.06□□□□□ -0.32
CDT1-203ENST00000569140 USP36Q9P275 1121 aaKnown RBP13.06□□□□□ -0.32
CDT1-203ENST00000569140 RCOR3Q9P2K3 495 aaPredicted RBP13.06□□□□□ -0.32
CDT1-203ENST00000569140 IL36AQ9UHA7 158 aa13.06□□□□□ -0.32
CDT1-203ENST00000569140 ATXN2Q99700 1313 aaKnown RBP13.06□□□□□ -0.32
CDT1-203ENST00000569140 J3KR12 359 aa13.05□□□□□ -0.32
CDT1-203ENST00000569140 PLK4O00444 970 aa13.05□□□□□ -0.32
CDT1-203ENST00000569140 KPNA3O00505 521 aaPredicted RBP13.05□□□□□ -0.32
CDT1-203ENST00000569140 TMCC1O94876 653 aa13.05□□□□□ -0.32
CDT1-203ENST00000569140 PTMAP06454 111 aaKnown RBP13.05□□□□□ -0.32
CDT1-203ENST00000569140 OXTRP30559 389 aa13.05□□□□□ -0.32
CDT1-203ENST00000569140 CHRNA3P32297 505 aa13.05□□□□□ -0.32
CDT1-203ENST00000569140 VASPP50552 380 aaPredicted RBP13.05□□□□□ -0.32
CDT1-203ENST00000569140 ZBTB16Q05516 673 aa13.05□□□□□ -0.32
CDT1-203ENST00000569140 SPEM2Q0P670 501 aa13.05□□□□□ -0.32
CDT1-203ENST00000569140 KIF5AQ12840 1032 aa13.05□□□□□ -0.32
CDT1-203ENST00000569140 SFSWAPQ12872 951 aaKnown RBP13.05□□□□□ -0.32
CDT1-203ENST00000569140 TCEAL1Q15170 157 aa13.05□□□□□ -0.32
CDT1-203ENST00000569140 ANKRD20A8PQ5CZ79 823 aa13.05□□□□□ -0.32
CDT1-203ENST00000569140 CARD16Q5EG05 197 aa13.05□□□□□ -0.32
CDT1-203ENST00000569140 ATXN7L2Q5T6C5 722 aaPredicted RBP13.05□□□□□ -0.32
CDT1-203ENST00000569140 LYSMD4Q5XG99 296 aa13.05□□□□□ -0.32
CDT1-203ENST00000569140 DPY19L3Q6ZPD9 716 aa13.05□□□□□ -0.32
CDT1-203ENST00000569140 ARHGAP36Q6ZRI8 547 aa13.05□□□□□ -0.32
CDT1-203ENST00000569140 RFX6Q8HWS3 928 aa13.05□□□□□ -0.32
CDT1-203ENST00000569140 CCDC50Q8IVM0 306 aa13.05□□□□□ -0.32
CDT1-203ENST00000569140 RGL4Q8IZJ4 473 aa13.05□□□□□ -0.32
CDT1-203ENST00000569140 HDDC3Q8N4P3 179 aa13.05□□□□□ -0.32
CDT1-203ENST00000569140 LZTR1Q8N653 840 aa13.05□□□□□ -0.32
CDT1-203ENST00000569140 CHST14Q8NCH0 376 aa13.05□□□□□ -0.32
CDT1-203ENST00000569140 CCDC112Q8NEF3 446 aa13.05□□□□□ -0.32
CDT1-203ENST00000569140 OR2A12Q8NGT7 310 aa13.05□□□□□ -0.32
CDT1-203ENST00000569140 PIP4K2CQ8TBX8 421 aa13.05□□□□□ -0.32
CDT1-203ENST00000569140 RAPGEF5Q92565 580 aa13.05□□□□□ -0.32
CDT1-203ENST00000569140 PIGKQ92643 395 aa13.05□□□□□ -0.32
CDT1-203ENST00000569140 RNF25Q96BH1 459 aaPredicted RBP13.05□□□□□ -0.32
CDT1-203ENST00000569140 EXOC2Q96KP1 924 aa13.05□□□□□ -0.32
CDT1-203ENST00000569140 HSPA12BQ96MM6 686 aa13.05□□□□□ -0.32
CDT1-203ENST00000569140 FAM129BQ96TA1 746 aa13.05□□□□□ -0.32
CDT1-203ENST00000569140 ZNF670Q9BS34 389 aa13.05□□□□□ -0.32
CDT1-203ENST00000569140 CINPQ9BW66 212 aaPredicted RBP13.05□□□□□ -0.32
CDT1-203ENST00000569140 CEP44Q9C0F1 390 aa13.05□□□□□ -0.32
CDT1-203ENST00000569140 LACRTQ9GZZ8 138 aa13.05□□□□□ -0.32
CDT1-203ENST00000569140 BTBD1Q9H0C5 482 aa13.05□□□□□ -0.32
CDT1-203ENST00000569140 ARRDC1-AS1Q9H2J1 176 aa13.05□□□□□ -0.32
CDT1-203ENST00000569140 DDX56Q9NY93 547 aaKnown RBP13.05□□□□□ -0.32
CDT1-203ENST00000569140 SCML1Q9UN30 329 aa13.05□□□□□ -0.32
CDT1-203ENST00000569140 DUSP10Q9Y6W6 482 aa13.05□□□□□ -0.32
CDT1-203ENST00000569140 KRIT1O00522 736 aa13.04□□□□□ -0.32
CDT1-203ENST00000569140 MCF2LO15068 1137 aa13.04□□□□□ -0.32
CDT1-203ENST00000569140 ALOX15BO15296 676 aa13.04□□□□□ -0.32
CDT1-203ENST00000569140 MFSD11O43934 449 aa13.04□□□□□ -0.32
CDT1-203ENST00000569140 PALMO75781 387 aa13.04□□□□□ -0.32
CDT1-203ENST00000569140 MAP3K6O95382 1288 aa13.04□□□□□ -0.32
CDT1-203ENST00000569140 IGSF6O95976 241 aa13.04□□□□□ -0.32
CDT1-203ENST00000569140 PRNPP04156 253 aa13.04□□□□□ -0.32
CDT1-203ENST00000569140 C5AR1P21730 350 aa13.04□□□□□ -0.32
CDT1-203ENST00000569140 KDELR1P24390 212 aa13.04□□□□□ -0.32
CDT1-203ENST00000569140 PTGER3P43115 390 aa13.04□□□□□ -0.32
CDT1-203ENST00000569140 ARSEP51690 589 aa13.04□□□□□ -0.32
CDT1-203ENST00000569140 CCNHP51946 323 aaPredicted RBP13.04□□□□□ -0.32
CDT1-203ENST00000569140 METAP1P53582 386 aa13.04□□□□□ -0.32
CDT1-203ENST00000569140 HADHBP55084 474 aaKnown RBP13.04□□□□□ -0.32
CDT1-203ENST00000569140 SNRPD1P62314 119 aaKnown RBP13.04□□□□□ -0.32
CDT1-203ENST00000569140 IFI16Q16666 785 aaKnown RBP13.04□□□□□ -0.32
CDT1-203ENST00000569140 ARSIQ5FYB1 569 aa13.04□□□□□ -0.32
CDT1-203ENST00000569140 C11orf63Q6NUN7 778 aa13.04□□□□□ -0.32
CDT1-203ENST00000569140 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.04□□□□□ -0.32
CDT1-203ENST00000569140 METTL3Q86U44 580 aaKnown RBP13.04□□□□□ -0.32
CDT1-203ENST00000569140 ARHGAP12Q8IWW6 846 aa13.04□□□□□ -0.32
CDT1-203ENST00000569140 TP53INP2Q8IXH6 220 aa13.04□□□□□ -0.32
CDT1-203ENST00000569140 PAF1Q8N7H5 531 aa13.04□□□□□ -0.32
CDT1-203ENST00000569140 TPCN2Q8NHX9 752 aa13.04□□□□□ -0.32
CDT1-203ENST00000569140 NSMCE1Q8WV22 266 aa13.04□□□□□ -0.32
CDT1-203ENST00000569140 TSC1Q92574 1164 aa13.04□□□□□ -0.32
CDT1-203ENST00000569140 ZC3H10Q96K80 434 aaKnown RBP13.04□□□□□ -0.32
CDT1-203ENST00000569140 GDAP1L1Q96MZ0 367 aa13.04□□□□□ -0.32
CDT1-203ENST00000569140 WSB2Q9NYS7 404 aaPredicted RBP13.04□□□□□ -0.32
CDT1-203ENST00000569140 HECAQ9UBI9 543 aaPredicted RBP13.04□□□□□ -0.32
CDT1-203ENST00000569140 TRIM10Q9UDY6 481 aa13.04□□□□□ -0.32
CDT1-203ENST00000569140 SERGEFQ9UGK8 458 aa13.04□□□□□ -0.32
CDT1-203ENST00000569140 SALL4Q9UJQ4 1053 aa13.04□□□□□ -0.32
CDT1-203ENST00000569140 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.04□□□□□ -0.32
CDT1-203ENST00000569140 ALG6Q9Y672 507 aa13.04□□□□□ -0.32
CDT1-203ENST00000569140 A0A0U1RQJ8 604 aa13.03□□□□□ -0.32
CDT1-203ENST00000569140 APOL1O14791 398 aa13.03□□□□□ -0.32
CDT1-203ENST00000569140 ARHGAP6O43182 974 aa13.03□□□□□ -0.32
CDT1-203ENST00000569140 PSTPIP1O43586 416 aa13.03□□□□□ -0.32
CDT1-203ENST00000569140 PRAMEF11O60813 436 aa13.03□□□□□ -0.32
CDT1-203ENST00000569140 LEFTY1O75610 366 aa13.03□□□□□ -0.32
CDT1-203ENST00000569140 NEBLO76041 1014 aa13.03□□□□□ -0.32
CDT1-203ENST00000569140 FSBPO95073 299 aa13.03□□□□□ -0.32
CDT1-203ENST00000569140 EPN2O95208 641 aa13.03□□□□□ -0.32
CDT1-203ENST00000569140 SEMA4FO95754 770 aa13.03□□□□□ -0.32
CDT1-203ENST00000569140 CD160O95971 181 aa13.03□□□□□ -0.32
CDT1-203ENST00000569140 CTSLP07711 333 aa13.03□□□□□ -0.32
CDT1-203ENST00000569140 RETP07949 1114 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms