RNA–Protein interactions for RNA: ENST00000568875.1

SNAPC5-208, Transcript of small nuclear RNA activating complex polypeptide 5, humanhuman

TSL 2

Gene SNAPC5, Length 1,741 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC5-208ENST00000568875 EDEM1Q92611 657 aa11.88□□□□□ -0.51
SNAPC5-208ENST00000568875 P2RY11Q96G91 374 aa11.88□□□□□ -0.51
SNAPC5-208ENST00000568875 POLR3BQ9NW08 1133 aaPredicted RBP11.88□□□□□ -0.51
SNAPC5-208ENST00000568875 MARK1Q9P0L2 795 aa11.88□□□□□ -0.51
SNAPC5-208ENST00000568875 CYTH4Q9UIA0 394 aa11.88□□□□□ -0.51
SNAPC5-208ENST00000568875 AGO1Q9UL18 857 aaKnown RBP11.88□□□□□ -0.51
SNAPC5-208ENST00000568875 DNPEPQ9ULA0 475 aa11.88□□□□□ -0.51
SNAPC5-208ENST00000568875 SMG5Q9UPR3 1016 aaKnown RBP11.88□□□□□ -0.51
SNAPC5-208ENST00000568875 ARL2BPQ9Y2Y0 163 aa11.88□□□□□ -0.51
SNAPC5-208ENST00000568875 SPTBN4Q9H254 2564 aa11.88□□□□□ -0.51
SNAPC5-208ENST00000568875 DMXL1Q9Y485 3027 aa11.87□□□□□ -0.51
SNAPC5-208ENST00000568875 SLC12A8A0AV02 714 aa11.87□□□□□ -0.51
SNAPC5-208ENST00000568875 FAM47DPA6NHR8 397 aa11.87□□□□□ -0.51
SNAPC5-208ENST00000568875 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.87□□□□□ -0.51
SNAPC5-208ENST00000568875 TCP11X1B4DZS4 312 aa11.87□□□□□ -0.51
SNAPC5-208ENST00000568875 FBXO21O94952 628 aa11.87□□□□□ -0.51
SNAPC5-208ENST00000568875 HMBSP08397 361 aa11.87□□□□□ -0.51
SNAPC5-208ENST00000568875 GRIA2P42262 883 aa11.87□□□□□ -0.51
SNAPC5-208ENST00000568875 TNFRSF4P43489 277 aa11.87□□□□□ -0.51
SNAPC5-208ENST00000568875 FNTBP49356 437 aa11.87□□□□□ -0.51
SNAPC5-208ENST00000568875 ARSEP51690 589 aa11.87□□□□□ -0.51
SNAPC5-208ENST00000568875 MNAT1P51948 309 aa11.87□□□□□ -0.51
SNAPC5-208ENST00000568875 GTF2A1P52655 376 aaPredicted RBP11.87□□□□□ -0.51
SNAPC5-208ENST00000568875 IL9RQ01113 521 aa11.87□□□□□ -0.51
SNAPC5-208ENST00000568875 TRIP4Q15650 581 aaPredicted RBP11.87□□□□□ -0.51
SNAPC5-208ENST00000568875 HADHQ16836 314 aaKnown RBP11.87□□□□□ -0.51
SNAPC5-208ENST00000568875 GALNTL6Q49A17 601 aa11.87□□□□□ -0.51
SNAPC5-208ENST00000568875 CCDC38Q502W7 563 aa11.87□□□□□ -0.51
SNAPC5-208ENST00000568875 TPGS1Q6ZTW0 290 aa11.87□□□□□ -0.51
SNAPC5-208ENST00000568875 CENPUQ71F23 418 aa11.87□□□□□ -0.51
SNAPC5-208ENST00000568875 PARP9Q8IXQ6 854 aa11.87□□□□□ -0.51
SNAPC5-208ENST00000568875 RNF139Q8WU17 664 aa11.87□□□□□ -0.51
SNAPC5-208ENST00000568875 MCEEQ96PE7 176 aa11.87□□□□□ -0.51
SNAPC5-208ENST00000568875 SSU72Q9NP77 194 aaKnown RBP11.87□□□□□ -0.51
SNAPC5-208ENST00000568875 KCNK9Q9NPC2 374 aa11.87□□□□□ -0.51
SNAPC5-208ENST00000568875 ARHGEF4Q9NR80 690 aa11.87□□□□□ -0.51
SNAPC5-208ENST00000568875 DEC1Q9P2X7 70 aa11.87□□□□□ -0.51
SNAPC5-208ENST00000568875 SFMBT1Q9UHJ3 866 aa11.87□□□□□ -0.51
SNAPC5-208ENST00000568875 FBXO10Q9UK96 956 aa11.87□□□□□ -0.51
SNAPC5-208ENST00000568875 TRIM24O15164 1050 aa11.86□□□□□ -0.51
SNAPC5-208ENST00000568875 HRO43593 1189 aa11.86□□□□□ -0.51
SNAPC5-208ENST00000568875 CACNG3O60359 315 aa11.86□□□□□ -0.51
SNAPC5-208ENST00000568875 LTFP02788 710 aa11.86□□□□□ -0.51
SNAPC5-208ENST00000568875 APODP05090 189 aa11.86□□□□□ -0.51
SNAPC5-208ENST00000568875 FYNP06241 537 aa11.86□□□□□ -0.51
SNAPC5-208ENST00000568875 TYRP14679 529 aa11.86□□□□□ -0.51
SNAPC5-208ENST00000568875 CORO1AP31146 461 aaKnown RBP11.86□□□□□ -0.51
SNAPC5-208ENST00000568875 STX2P32856 288 aa11.86□□□□□ -0.51
SNAPC5-208ENST00000568875 SKIV2L2P42285 1042 aaKnown RBP11.86□□□□□ -0.51
SNAPC5-208ENST00000568875 KIR2DL1P43626 348 aaPredicted RBP11.86□□□□□ -0.51
SNAPC5-208ENST00000568875 ACADSBP45954 432 aa11.86□□□□□ -0.51
SNAPC5-208ENST00000568875 VPS41P49754 854 aa11.86□□□□□ -0.51
SNAPC5-208ENST00000568875 MRPS21P82921 87 aaKnown RBP11.86□□□□□ -0.51
SNAPC5-208ENST00000568875 CCDC15Q0P6D6 951 aa11.86□□□□□ -0.51
SNAPC5-208ENST00000568875 SNCBQ16143 134 aa11.86□□□□□ -0.51
SNAPC5-208ENST00000568875 SPRED3Q2MJR0 410 aa11.86□□□□□ -0.51
SNAPC5-208ENST00000568875 C2orf27AQ580R0 203 aa11.86□□□□□ -0.51
SNAPC5-208ENST00000568875 RNASEH2BQ5TBB1 312 aaKnown RBP11.86□□□□□ -0.51
SNAPC5-208ENST00000568875 NUGGCQ68CJ6 796 aa11.86□□□□□ -0.51
SNAPC5-208ENST00000568875 RNF43Q68DV7 783 aa11.86□□□□□ -0.51
SNAPC5-208ENST00000568875 MSANTD2Q6P1R3 559 aa11.86□□□□□ -0.51
SNAPC5-208ENST00000568875 BBS12Q6ZW61 710 aa11.86□□□□□ -0.51
SNAPC5-208ENST00000568875 SPATA21Q7Z572 469 aa11.86□□□□□ -0.51
SNAPC5-208ENST00000568875 TRABD2AQ86V40 505 aa11.86□□□□□ -0.51
SNAPC5-208ENST00000568875 LONP2Q86WA8 852 aa11.86□□□□□ -0.51
SNAPC5-208ENST00000568875 DENND1CQ8IV53 801 aa11.86□□□□□ -0.51
SNAPC5-208ENST00000568875 CAMKK1Q8N5S9 505 aa11.86□□□□□ -0.51
SNAPC5-208ENST00000568875 PLD4Q96BZ4 506 aa11.86□□□□□ -0.51
SNAPC5-208ENST00000568875 BBS2Q9BXC9 721 aa11.86□□□□□ -0.51
SNAPC5-208ENST00000568875 MIS12Q9H081 205 aa11.86□□□□□ -0.51
SNAPC5-208ENST00000568875 SLC8A2Q9UPR5 921 aa11.86□□□□□ -0.51
SNAPC5-208ENST00000568875 HBS1LQ9Y450 684 aaKnown RBP11.86□□□□□ -0.51
SNAPC5-208ENST00000568875 CCDC163A0A0D9SF12 145 aa11.86□□□□□ -0.51
SNAPC5-208ENST00000568875 EXOC1LA0A1B0GW35 172 aa11.86□□□□□ -0.51
SNAPC5-208ENST00000568875 RASA4BC9J798 803 aa11.86□□□□□ -0.51
SNAPC5-208ENST00000568875 NEDD8-MDP1E9PL57 170 aa11.86□□□□□ -0.51
SNAPC5-208ENST00000568875 PAPSS1O43252 624 aaPredicted RBP11.86□□□□□ -0.51
SNAPC5-208ENST00000568875 RASA4O43374 803 aa11.86□□□□□ -0.51
SNAPC5-208ENST00000568875 CISD3P0C7P0 127 aa11.86□□□□□ -0.51
SNAPC5-208ENST00000568875 KRT10P13645 584 aa11.86□□□□□ -0.51
SNAPC5-208ENST00000568875 OGDHQ02218 1023 aa11.86□□□□□ -0.51
SNAPC5-208ENST00000568875 GPS1Q13098 491 aa11.86□□□□□ -0.51
SNAPC5-208ENST00000568875 MPP2Q14168 576 aa11.86□□□□□ -0.51
SNAPC5-208ENST00000568875 DMC1Q14565 340 aa11.86□□□□□ -0.51
SNAPC5-208ENST00000568875 PREPLQ4J6C6 727 aaPredicted RBP11.86□□□□□ -0.51
SNAPC5-208ENST00000568875 DAB2IPQ5VWQ8 1189 aa11.86□□□□□ -0.51
SNAPC5-208ENST00000568875 HEATR6Q6AI08 1181 aaKnown RBP11.86□□□□□ -0.51
SNAPC5-208ENST00000568875 BEND5Q7L4P6 421 aa11.86□□□□□ -0.51
SNAPC5-208ENST00000568875 FAM217AQ8IXS0 508 aa11.86□□□□□ -0.51
SNAPC5-208ENST00000568875 CYP4X1Q8N118 509 aa11.86□□□□□ -0.51
SNAPC5-208ENST00000568875 C9orf72Q96LT7 481 aa11.86□□□□□ -0.51
SNAPC5-208ENST00000568875 SAYSD1Q9NPB0 183 aa11.86□□□□□ -0.51
SNAPC5-208ENST00000568875 STARD13Q9Y3M8 1113 aa11.86□□□□□ -0.51
SNAPC5-208ENST00000568875 FARP1Q9Y4F1 1045 aaPredicted RBP11.86□□□□□ -0.51
SNAPC5-208ENST00000568875 DCHS1Q96JQ0 3298 aa11.86□□□□□ -0.51
SNAPC5-208ENST00000568875 TBC1D3BA6NDS4 549 aa11.85□□□□□ -0.51
SNAPC5-208ENST00000568875 C3orf70A6NLC5 250 aaPredicted RBP11.85□□□□□ -0.51
SNAPC5-208ENST00000568875 E5RJQ4 531 aa11.85□□□□□ -0.51
SNAPC5-208ENST00000568875 PENKP01210 267 aaPredicted RBP11.85□□□□□ -0.51
SNAPC5-208ENST00000568875 KRT3P12035 628 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms