RNA–Protein interactions for RNA: ENST00000566612.5

CDH1-210, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 4,138 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-210ENST00000566612 LGI2Q8N0V4 545 aa11.76□□□□□ -0.53
CDH1-210ENST00000566612 PCYOX1LQ8NBM8 494 aa11.76□□□□□ -0.53
CDH1-210ENST00000566612 PIF1Q9H611 641 aa11.76□□□□□ -0.53
CDH1-210ENST00000566612 STARD7Q9NQZ5 370 aa11.76□□□□□ -0.53
CDH1-210ENST00000566612 LRCH1Q9Y2L9 728 aa11.76□□□□□ -0.53
CDH1-210ENST00000566612 SNX13Q9Y5W8 968 aa11.76□□□□□ -0.53
CDH1-210ENST00000566612 AP2A1O95782 977 aa11.76□□□□□ -0.53
CDH1-210ENST00000566612 SERPINF2P08697 491 aa11.76□□□□□ -0.53
CDH1-210ENST00000566612 NMBRP28336 390 aa11.76□□□□□ -0.53
CDH1-210ENST00000566612 SERPINH1P50454 418 aaKnown RBP11.76□□□□□ -0.53
CDH1-210ENST00000566612 CACNA2D1P54289 1103 aa11.76□□□□□ -0.53
CDH1-210ENST00000566612 SEMA5AQ13591 1074 aa11.76□□□□□ -0.53
CDH1-210ENST00000566612 GRM3Q14832 879 aa11.76□□□□□ -0.53
CDH1-210ENST00000566612 ZBTB18Q99592 522 aa11.76□□□□□ -0.53
CDH1-210ENST00000566612 RCOR3Q9P2K3 495 aaPredicted RBP11.76□□□□□ -0.53
CDH1-210ENST00000566612 GIT1Q9Y2X7 761 aa11.76□□□□□ -0.53
CDH1-210ENST00000566612 MAGEA13PA6NCF6 341 aa11.75□□□□□ -0.53
CDH1-210ENST00000566612 TK2O00142 265 aa11.75□□□□□ -0.53
CDH1-210ENST00000566612 DPYSL4O14531 572 aa11.75□□□□□ -0.53
CDH1-210ENST00000566612 H2AFYO75367 372 aaKnown RBP11.75□□□□□ -0.53
CDH1-210ENST00000566612 BEST1O76090 585 aa11.75□□□□□ -0.53
CDH1-210ENST00000566612 PYGLP06737 847 aa11.75□□□□□ -0.53
CDH1-210ENST00000566612 ELNP15502 786 aa11.75□□□□□ -0.53
CDH1-210ENST00000566612 SOX4Q06945 474 aaPredicted RBP11.75□□□□□ -0.53
CDH1-210ENST00000566612 ZNF460Q14592 562 aa11.75□□□□□ -0.53
CDH1-210ENST00000566612 SLC9A4Q6AI14 798 aa11.75□□□□□ -0.53
CDH1-210ENST00000566612 CYP2R1Q6VVX0 501 aa11.75□□□□□ -0.53
CDH1-210ENST00000566612 SIGLEC10Q96LC7 697 aa11.75□□□□□ -0.53
CDH1-210ENST00000566612 MYH9P35579 1960 aaKnown RBP11.75□□□□□ -0.53
CDH1-210ENST00000566612 ZBTB42B2RXF5 422 aa11.75□□□□□ -0.53
CDH1-210ENST00000566612 NR5A2O00482 541 aa11.75□□□□□ -0.53
CDH1-210ENST00000566612 COX4I1P13073 169 aa11.75□□□□□ -0.53
CDH1-210ENST00000566612 CRABP2P29373 138 aa11.75□□□□□ -0.53
CDH1-210ENST00000566612 RPL9P32969 192 aaKnown RBP11.75□□□□□ -0.53
CDH1-210ENST00000566612 GMPRP36959 345 aa11.75□□□□□ -0.53
CDH1-210ENST00000566612 OXCT1P55809 520 aa11.75□□□□□ -0.53
CDH1-210ENST00000566612 MPP1Q00013 466 aa11.75□□□□□ -0.53
CDH1-210ENST00000566612 PSMD5Q16401 504 aa11.75□□□□□ -0.53
CDH1-210ENST00000566612 DEFB128Q7Z7B8 93 aa11.75□□□□□ -0.53
CDH1-210ENST00000566612 GDPD5Q8WTR4 605 aa11.75□□□□□ -0.53
CDH1-210ENST00000566612 TMEM174Q8WUU8 243 aa11.75□□□□□ -0.53
CDH1-210ENST00000566612 C7orf26Q96N11 449 aa11.75□□□□□ -0.53
CDH1-210ENST00000566612 ZNF184Q99676 751 aaPredicted RBP11.75□□□□□ -0.53
CDH1-210ENST00000566612 TLR8Q9NR97 1041 aaKnown RBP11.75□□□□□ -0.53
CDH1-210ENST00000566612 FETUBQ9UGM5 382 aa11.75□□□□□ -0.53
CDH1-210ENST00000566612 PSAT1Q9Y617 370 aa11.75□□□□□ -0.53
CDH1-210ENST00000566612 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.75□□□□□ -0.53
CDH1-210ENST00000566612 A0A1W2PQH9 124 aa11.75□□□□□ -0.53
CDH1-210ENST00000566612 C2orf81A6NN90 581 aa11.75□□□□□ -0.53
CDH1-210ENST00000566612 ITM2AO43736 263 aa11.75□□□□□ -0.53
CDH1-210ENST00000566612 ZBTB48P10074 688 aaPredicted RBP11.75□□□□□ -0.53
CDH1-210ENST00000566612 IL10P22301 178 aa11.75□□□□□ -0.53
CDH1-210ENST00000566612 DNAJB2P25686 324 aa11.75□□□□□ -0.53
CDH1-210ENST00000566612 HMOX2P30519 316 aa11.75□□□□□ -0.53
CDH1-210ENST00000566612 HOXA11P31270 313 aaPredicted RBP11.75□□□□□ -0.53
CDH1-210ENST00000566612 GALNTL6Q49A17 601 aa11.75□□□□□ -0.53
CDH1-210ENST00000566612 ESRP1Q6NXG1 681 aaKnown RBP11.75□□□□□ -0.53
CDH1-210ENST00000566612 FAM228AQ86W67 206 aa11.75□□□□□ -0.53
CDH1-210ENST00000566612 DENND6AQ8IWF6 608 aa11.75□□□□□ -0.53
CDH1-210ENST00000566612 LPCAT1Q8NF37 534 aa11.75□□□□□ -0.53
CDH1-210ENST00000566612 OR52K2Q8NGK3 314 aa11.75□□□□□ -0.53
CDH1-210ENST00000566612 CEP70Q8NHQ1 597 aa11.75□□□□□ -0.53
CDH1-210ENST00000566612 CXorf38Q8TB03 319 aa11.75□□□□□ -0.53
CDH1-210ENST00000566612 SH3TC2Q8TF17 1288 aa11.75□□□□□ -0.53
CDH1-210ENST00000566612 PBXIP1Q96AQ6 731 aa11.75□□□□□ -0.53
CDH1-210ENST00000566612 SEMA3CQ99985 751 aa11.75□□□□□ -0.53
CDH1-210ENST00000566612 TRIM15Q9C019 465 aa11.75□□□□□ -0.53
CDH1-210ENST00000566612 GLOD4Q9HC38 313 aa11.75□□□□□ -0.53
CDH1-210ENST00000566612 SLCO1B7G3V0H7 640 aa11.75□□□□□ -0.53
CDH1-210ENST00000566612 HDAC3O15379 428 aa11.75□□□□□ -0.53
CDH1-210ENST00000566612 TGDSO95455 350 aa11.75□□□□□ -0.53
CDH1-210ENST00000566612 VAV1P15498 845 aa11.75□□□□□ -0.53
CDH1-210ENST00000566612 ITGB6P18564 788 aa11.75□□□□□ -0.53
CDH1-210ENST00000566612 ALDH1A3P47895 512 aa11.75□□□□□ -0.53
CDH1-210ENST00000566612 SLC5A3P53794 718 aa11.75□□□□□ -0.53
CDH1-210ENST00000566612 TUSC3Q13454 348 aa11.75□□□□□ -0.53
CDH1-210ENST00000566612 PRKD1Q15139 912 aaPredicted RBP11.75□□□□□ -0.53
CDH1-210ENST00000566612 TMCO4Q5TGY1 634 aa11.75□□□□□ -0.53
CDH1-210ENST00000566612 TP53INP2Q8IXH6 220 aa11.75□□□□□ -0.53
CDH1-210ENST00000566612 HDAC10Q969S8 669 aa11.75□□□□□ -0.53
CDH1-210ENST00000566612 ZBED2Q9BTP6 218 aa11.75□□□□□ -0.53
CDH1-210ENST00000566612 PRKD2Q9BZL6 878 aa11.75□□□□□ -0.53
CDH1-210ENST00000566612 KLHL4Q9C0H6 718 aa11.75□□□□□ -0.53
CDH1-210ENST00000566612 MRPL46Q9H2W6 279 aaKnown RBP11.75□□□□□ -0.53
CDH1-210ENST00000566612 NKX1-2Q9UD57 310 aaPredicted RBP11.75□□□□□ -0.53
CDH1-210ENST00000566612 MCM8Q9UJA3 840 aa11.75□□□□□ -0.53
CDH1-210ENST00000566612 FBXW11Q9UKB1 542 aa11.75□□□□□ -0.53
CDH1-210ENST00000566612 SCN9AQ15858 1988 aa11.74□□□□□ -0.53
CDH1-210ENST00000566612 MEIS3P2A8K0S8 358 aa11.74□□□□□ -0.53
CDH1-210ENST00000566612 ZBBXA8MT70 800 aa11.74□□□□□ -0.53
CDH1-210ENST00000566612 GRK4P32298 578 aa11.74□□□□□ -0.53
CDH1-210ENST00000566612 CHRNA4P43681 627 aa11.74□□□□□ -0.53
CDH1-210ENST00000566612 CDH13P55290 713 aa11.74□□□□□ -0.53
CDH1-210ENST00000566612 ARHGEF6Q15052 776 aa11.74□□□□□ -0.53
CDH1-210ENST00000566612 CFAP52Q8N1V2 620 aa11.74□□□□□ -0.53
CDH1-210ENST00000566612 CARNMT1Q8N4J0 409 aa11.74□□□□□ -0.53
CDH1-210ENST00000566612 TMEM40Q8WWA1 233 aa11.74□□□□□ -0.53
CDH1-210ENST00000566612 CCDC126Q96EE4 140 aa11.74□□□□□ -0.53
CDH1-210ENST00000566612 GCNAQ96QF7 691 aa11.74□□□□□ -0.53
CDH1-210ENST00000566612 NMRK1Q9NWW6 199 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms