RNA–Protein interactions for RNA: ENST00000566240.1

CNOT1-209, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 4

Gene CNOT1, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-209ENST00000566240 OLR1P78380 273 aa5.36□□□□□ -1.55
CNOT1-209ENST00000566240 CCDC96Q2M329 555 aa5.36□□□□□ -1.55
CNOT1-209ENST00000566240 VWA5B1Q5TIE3 1220 aa5.36□□□□□ -1.55
CNOT1-209ENST00000566240 ZKSCAN2Q63HK3 967 aa5.36□□□□□ -1.55
CNOT1-209ENST00000566240 KRTAP5-3Q6L8H2 238 aa5.36□□□□□ -1.55
CNOT1-209ENST00000566240 NCEH1Q6PIU2 408 aa5.36□□□□□ -1.55
CNOT1-209ENST00000566240 FRMD1Q8N878 549 aa5.36□□□□□ -1.55
CNOT1-209ENST00000566240 CADM4Q8NFZ8 388 aa5.36□□□□□ -1.55
CNOT1-209ENST00000566240 SMARCE1Q969G3 411 aa5.36□□□□□ -1.55
CNOT1-209ENST00000566240 REPS1Q96D71 796 aa5.36□□□□□ -1.55
CNOT1-209ENST00000566240 CALML4Q96GE6 196 aa5.36□□□□□ -1.55
CNOT1-209ENST00000566240 ENTPD7Q9NQZ7 604 aa5.36□□□□□ -1.55
CNOT1-209ENST00000566240 SNTG1Q9NSN8 517 aa5.36□□□□□ -1.55
CNOT1-209ENST00000566240 SH3BP4Q9P0V3 963 aa5.36□□□□□ -1.55
CNOT1-209ENST00000566240 KIAA1456Q9P272 454 aa5.36□□□□□ -1.55
CNOT1-209ENST00000566240 RPS6KA6Q9UK32 745 aa5.36□□□□□ -1.55
CNOT1-209ENST00000566240 MAFFQ9ULX9 164 aa5.36□□□□□ -1.55
CNOT1-209ENST00000566240 ICKQ9UPZ9 632 aa5.36□□□□□ -1.55
CNOT1-209ENST00000566240 TMEM5Q9Y2B1 443 aa5.36□□□□□ -1.55
CNOT1-209ENST00000566240 CLDN16Q9Y5I7 305 aa5.36□□□□□ -1.55
CNOT1-209ENST00000566240 SNX8Q9Y5X2 465 aa5.36□□□□□ -1.55
CNOT1-209ENST00000566240 ARHGAP10A1A4S6 786 aa5.35□□□□□ -1.55
CNOT1-209ENST00000566240 TARSL2A2RTX5 802 aaKnown RBP5.35□□□□□ -1.55
CNOT1-209ENST00000566240 POC1B-GALNT4F8VUJ3 575 aa5.35□□□□□ -1.55
CNOT1-209ENST00000566240 UBE2Q2LH0YL09 131 aa5.35□□□□□ -1.55
CNOT1-209ENST00000566240 HNRNPCL1O60812 293 aaKnown RBP5.35□□□□□ -1.55
CNOT1-209ENST00000566240 CDH2P19022 906 aaPredicted RBP5.35□□□□□ -1.55
CNOT1-209ENST00000566240 POU5F1Q01860 360 aaKnown RBP5.35□□□□□ -1.55
CNOT1-209ENST00000566240 BECN1Q14457 450 aa5.35□□□□□ -1.55
CNOT1-209ENST00000566240 RPE65Q16518 533 aa5.35□□□□□ -1.55
CNOT1-209ENST00000566240 EDRF1Q3B7T1 1238 aa5.35□□□□□ -1.55
CNOT1-209ENST00000566240 PLK5Q496M5 336 aa5.35□□□□□ -1.55
CNOT1-209ENST00000566240 C5orf22Q49AR2 442 aa5.35□□□□□ -1.55
CNOT1-209ENST00000566240 FAM133BQ5BKY9 247 aaKnown RBP5.35□□□□□ -1.55
CNOT1-209ENST00000566240 FAM171A1Q5VUB5 890 aa5.35□□□□□ -1.55
CNOT1-209ENST00000566240 TMEM268Q5VZI3 342 aa5.35□□□□□ -1.55
CNOT1-209ENST00000566240 ATG9BQ674R7 924 aa5.35□□□□□ -1.55
CNOT1-209ENST00000566240 KLHL35Q6PF15 583 aa5.35□□□□□ -1.55
CNOT1-209ENST00000566240 CYP20A1Q6UW02 462 aa5.35□□□□□ -1.55
CNOT1-209ENST00000566240 DBX2Q6ZNG2 339 aa5.35□□□□□ -1.55
CNOT1-209ENST00000566240 MOB3CQ70IA8 216 aa5.35□□□□□ -1.55
CNOT1-209ENST00000566240 SPRED1Q7Z699 444 aa5.35□□□□□ -1.55
CNOT1-209ENST00000566240 FAM160B2Q86V87 743 aa5.35□□□□□ -1.55
CNOT1-209ENST00000566240 TAGAPQ8N103 731 aa5.35□□□□□ -1.55
CNOT1-209ENST00000566240 TMEM217Q8N7C4 229 aa5.35□□□□□ -1.55
CNOT1-209ENST00000566240 FAM47BQ8NA70 645 aa5.35□□□□□ -1.55
CNOT1-209ENST00000566240 TMEM116Q8NCL8 245 aa5.35□□□□□ -1.55
CNOT1-209ENST00000566240 ZFPM2Q8WW38 1151 aa5.35□□□□□ -1.55
CNOT1-209ENST00000566240 FAM149B1Q96BN6 582 aa5.35□□□□□ -1.55
CNOT1-209ENST00000566240 FEM1CQ96JP0 617 aa5.35□□□□□ -1.55
CNOT1-209ENST00000566240 FCRL5Q96RD9 977 aa5.35□□□□□ -1.55
CNOT1-209ENST00000566240 MXD3Q9BW11 206 aa5.35□□□□□ -1.55
CNOT1-209ENST00000566240 FRMD8Q9BZ67 464 aaPredicted RBP5.35□□□□□ -1.55
CNOT1-209ENST00000566240 SMARCAD1Q9H4L7 1026 aa5.35□□□□□ -1.55
CNOT1-209ENST00000566240 ATP8A2Q9NTI2 1148 aa5.35□□□□□ -1.55
CNOT1-209ENST00000566240 CDH22Q9UJ99 828 aa5.35□□□□□ -1.55
CNOT1-209ENST00000566240 INTS6Q9UL03 887 aaKnown RBP5.35□□□□□ -1.55
CNOT1-209ENST00000566240 CAPN7Q9Y6W3 813 aa5.35□□□□□ -1.55
CNOT1-209ENST00000566240 TARM1B6A8C7 271 aa5.34□□□□□ -1.55
CNOT1-209ENST00000566240 MGST3O14880 152 aa5.34□□□□□ -1.55
CNOT1-209ENST00000566240 BCAT2O15382 392 aaPredicted RBP5.34□□□□□ -1.55
CNOT1-209ENST00000566240 SEC31AO94979 1220 aaKnown RBP5.34□□□□□ -1.55
CNOT1-209ENST00000566240 IL1AP01583 271 aa5.34□□□□□ -1.55
CNOT1-209ENST00000566240 TTKP33981 857 aa5.34□□□□□ -1.55
CNOT1-209ENST00000566240 CYP2J2P51589 502 aa5.34□□□□□ -1.55
CNOT1-209ENST00000566240 SOX10P56693 466 aa5.34□□□□□ -1.55
CNOT1-209ENST00000566240 SNX16P57768 344 aa5.34□□□□□ -1.55
CNOT1-209ENST00000566240 IFI35P80217 286 aaPredicted RBP5.34□□□□□ -1.55
CNOT1-209ENST00000566240 GOLGA8DPQ0D2H9 430 aa5.34□□□□□ -1.55
CNOT1-209ENST00000566240 EPS8Q12929 822 aa5.34□□□□□ -1.55
CNOT1-209ENST00000566240 MTA1Q13330 715 aa5.34□□□□□ -1.55
CNOT1-209ENST00000566240 PUM1Q14671 1186 aaKnown RBP eCLIP5.34□□□□□ -1.55
CNOT1-209ENST00000566240 CRYMQ14894 314 aa5.34□□□□□ -1.55
CNOT1-209ENST00000566240 TAF11Q15544 211 aa5.34□□□□□ -1.55
CNOT1-209ENST00000566240 SPATS1Q496A3 300 aa5.34□□□□□ -1.55
CNOT1-209ENST00000566240 SERTAD4-AS1Q5TG53 156 aa5.34□□□□□ -1.55
CNOT1-209ENST00000566240 HECTD2Q5U5R9 776 aa5.34□□□□□ -1.55
CNOT1-209ENST00000566240 RBM44Q6ZP01 1051 aaKnown RBP5.34□□□□□ -1.55
CNOT1-209ENST00000566240 PRRT2Q7Z6L0 340 aaPredicted RBP5.34□□□□□ -1.55
CNOT1-209ENST00000566240 C17orf53Q8N3J3 647 aaPredicted RBP5.34□□□□□ -1.55
CNOT1-209ENST00000566240 CAGE1Q8TC20 777 aa5.34□□□□□ -1.55
CNOT1-209ENST00000566240 NEU4Q8WWR8 484 aaPredicted RBP5.34□□□□□ -1.55
CNOT1-209ENST00000566240 POMGNT1Q8WZA1 660 aa5.34□□□□□ -1.55
CNOT1-209ENST00000566240 PIGKQ92643 395 aa5.34□□□□□ -1.55
CNOT1-209ENST00000566240 KAT2BQ92831 832 aa5.34□□□□□ -1.55
CNOT1-209ENST00000566240 CMTM3Q96MX0 182 aa5.34□□□□□ -1.55
CNOT1-209ENST00000566240 ASB2Q96Q27 587 aa5.34□□□□□ -1.55
CNOT1-209ENST00000566240 TEFMQ96QE5 360 aaKnown RBP5.34□□□□□ -1.55
CNOT1-209ENST00000566240 FRG2BQ96QU4 278 aa5.34□□□□□ -1.55
CNOT1-209ENST00000566240 MAP7D2Q96T17 732 aa5.34□□□□□ -1.55
CNOT1-209ENST00000566240 TIMP4Q99727 224 aa5.34□□□□□ -1.55
CNOT1-209ENST00000566240 SLF1Q9BQI6 1058 aa5.34□□□□□ -1.55
CNOT1-209ENST00000566240 IFT27Q9BW83 186 aa5.34□□□□□ -1.55
CNOT1-209ENST00000566240 KAT14Q9H8E8 782 aa5.34□□□□□ -1.55
CNOT1-209ENST00000566240 SCPEP1Q9HB40 452 aa5.34□□□□□ -1.55
CNOT1-209ENST00000566240 GRHL1Q9NZI5 618 aa5.34□□□□□ -1.55
CNOT1-209ENST00000566240 BCCIPQ9P287 314 aaKnown RBP eCLIP5.34□□□□□ -1.55
CNOT1-209ENST00000566240 FBXO40Q9UH90 709 aa5.34□□□□□ -1.55
CNOT1-209ENST00000566240 ADAM21Q9UKJ8 722 aa5.34□□□□□ -1.55
CNOT1-209ENST00000566240 MKLN1Q9UL63 735 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms