RNA–Protein interactions for RNA: ENST00000565151.1

USB1-210, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 886 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-210ENST00000565151 OR12D3Q9UGF7 316 aa15.04■□□□□ -0
USB1-210ENST00000565151 MSRB2Q9Y3D2 182 aa15.04■□□□□ -0
USB1-210ENST00000565151 WASF2Q9Y6W5 498 aa15.04■□□□□ -0
USB1-210ENST00000565151 SLC7A4O43246 635 aa15.03■□□□□ -0
USB1-210ENST00000565151 PCDHGA12O60330 932 aa15.03■□□□□ -0
USB1-210ENST00000565151 LRIG2O94898 1065 aa15.03■□□□□ -0
USB1-210ENST00000565151 MBD3O95983 291 aa15.03■□□□□ -0
USB1-210ENST00000565151 KRT3P12035 628 aa15.03■□□□□ -0
USB1-210ENST00000565151 CD38P28907 300 aa15.03■□□□□ -0
USB1-210ENST00000565151 KRT83P78385 493 aa15.03■□□□□ -0
USB1-210ENST00000565151 ARSIQ5FYB1 569 aa15.03■□□□□ -0
USB1-210ENST00000565151 C6orf118Q5T5N4 469 aa15.03■□□□□ -0
USB1-210ENST00000565151 STRADAQ7RTN6 431 aa15.03■□□□□ -0
USB1-210ENST00000565151 NETO2Q8NC67 525 aa15.03■□□□□ -0
USB1-210ENST00000565151 MSANTD4Q8NCY6 345 aa15.03■□□□□ -0
USB1-210ENST00000565151 RHBDD1Q8TEB9 315 aa15.03■□□□□ -0
USB1-210ENST00000565151 PCMTD1Q96MG8 357 aaPredicted RBP15.03■□□□□ -0
USB1-210ENST00000565151 NAP1L5Q96NT1 182 aaPredicted RBP15.03■□□□□ -0
USB1-210ENST00000565151 PPP1R9BQ96SB3 815 aa15.03■□□□□ -0
USB1-210ENST00000565151 KLC2Q9H0B6 622 aa15.03■□□□□ -0
USB1-210ENST00000565151 RTN4Q9NQC3 1192 aaKnown RBP15.03■□□□□ -0
USB1-210ENST00000565151 ZMIZ1Q9ULJ6 1067 aa15.03■□□□□ -0
USB1-210ENST00000565151 ZFR2Q9UPR6 939 aaKnown RBP15.03■□□□□ -0
USB1-210ENST00000565151 FCF1Q9Y324 198 aaKnown RBP15.03■□□□□ -0
USB1-210ENST00000565151 DAAM1Q9Y4D1 1078 aa15.03■□□□□ -0
USB1-210ENST00000565151 PAXBP1Q9Y5B6 917 aa15.03■□□□□ -0
USB1-210ENST00000565151 NBEAQ8NFP9 2946 aa15.03■□□□□ -0
USB1-210ENST00000565151 CHD6Q8TD26 2715 aa15.03■□□□□ -0
USB1-210ENST00000565151 DSPP15924 2871 aaKnown RBP15.03■□□□□ -0
USB1-210ENST00000565151 KNTC1P50748 2209 aa15.02■□□□□ -0
USB1-210ENST00000565151 SIGLEC16A6NMB1 481 aa15.02■□□□□ -0
USB1-210ENST00000565151 TAF4O00268 1085 aa15.02■□□□□ -0
USB1-210ENST00000565151 FLRT2O43155 660 aa15.02■□□□□ -0
USB1-210ENST00000565151 CCP110O43303 1012 aa15.02■□□□□ -0
USB1-210ENST00000565151 PLEKP08567 350 aaPredicted RBP15.02■□□□□ -0
USB1-210ENST00000565151 CDK11BP21127 795 aaKnown RBP15.02■□□□□ -0
USB1-210ENST00000565151 SDC4P31431 198 aa15.02■□□□□ -0
USB1-210ENST00000565151 GKP32189 559 aa15.02■□□□□ -0
USB1-210ENST00000565151 SERPINH1P50454 418 aaKnown RBP15.02■□□□□ -0
USB1-210ENST00000565151 NXPH1P58417 271 aa15.02■□□□□ -0
USB1-210ENST00000565151 BNIP3Q12983 259 aa15.02■□□□□ -0
USB1-210ENST00000565151 HNRNPDQ14103 355 aaKnown RBP15.02■□□□□ -0
USB1-210ENST00000565151 FGL2Q14314 439 aa15.02■□□□□ -0
USB1-210ENST00000565151 IQCB1Q15051 598 aa15.02■□□□□ -0
USB1-210ENST00000565151 FAM46CQ5VWP2 391 aa15.02■□□□□ -0
USB1-210ENST00000565151 ZNF783Q6ZMS7 281 aa15.02■□□□□ -0
USB1-210ENST00000565151 LEKR1Q6ZMV7 388 aa15.02■□□□□ -0
USB1-210ENST00000565151 TRIM69Q86WT6 500 aa15.02■□□□□ -0
USB1-210ENST00000565151 C3orf20Q8ND61 904 aa15.02■□□□□ -0
USB1-210ENST00000565151 TMIEQ8NEW7 156 aa15.02■□□□□ -0
USB1-210ENST00000565151 ARHGEF2Q92974 986 aaKnown RBP15.02■□□□□ -0
USB1-210ENST00000565151 ELF4Q99607 663 aaPredicted RBP15.02■□□□□ -0
USB1-210ENST00000565151 KDM4CQ9H3R0 1056 aa15.02■□□□□ -0
USB1-210ENST00000565151 ATP13A1Q9HD20 1204 aa15.02■□□□□ -0
USB1-210ENST00000565151 AASDHPPTQ9NRN7 309 aa15.02■□□□□ -0
USB1-210ENST00000565151 DNAI1Q9UI46 699 aa15.02■□□□□ -0
USB1-210ENST00000565151 RALYQ9UKM9 306 aaKnown RBP15.02■□□□□ -0
USB1-210ENST00000565151 PCDHB9Q9Y5E1 797 aa15.02■□□□□ -0
USB1-210ENST00000565151 SHROOM3Q8TF72 1996 aa15.02□□□□□ -0.01
USB1-210ENST00000565151 C1QTNF3-AMACRE9PGA6 284 aa15.01□□□□□ -0.01
USB1-210ENST00000565151 TLR4O00206 839 aa15.01□□□□□ -0.01
USB1-210ENST00000565151 KPNA3O00505 521 aaPredicted RBP15.01□□□□□ -0.01
USB1-210ENST00000565151 RNGTTO60942 597 aaKnown RBP15.01□□□□□ -0.01
USB1-210ENST00000565151 LEFTY1O75610 366 aa15.01□□□□□ -0.01
USB1-210ENST00000565151 TPM2P07951 284 aa15.01□□□□□ -0.01
USB1-210ENST00000565151 PRLRP16471 622 aa15.01□□□□□ -0.01
USB1-210ENST00000565151 RHOQP17081 205 aa15.01□□□□□ -0.01
USB1-210ENST00000565151 GPD1P21695 349 aa15.01□□□□□ -0.01
USB1-210ENST00000565151 NSFP46459 744 aaKnown RBP15.01□□□□□ -0.01
USB1-210ENST00000565151 CCT8P50990 548 aa15.01□□□□□ -0.01
USB1-210ENST00000565151 SCAPQ12770 1279 aa15.01□□□□□ -0.01
USB1-210ENST00000565151 SFSWAPQ12872 951 aaKnown RBP15.01□□□□□ -0.01
USB1-210ENST00000565151 ZNF284Q2VY69 593 aa15.01□□□□□ -0.01
USB1-210ENST00000565151 NAPEPLDQ6IQ20 393 aa15.01□□□□□ -0.01
USB1-210ENST00000565151 ACAD10Q6JQN1 1059 aa15.01□□□□□ -0.01
USB1-210ENST00000565151 ADAT2Q7Z6V5 191 aaKnown RBP15.01□□□□□ -0.01
USB1-210ENST00000565151 DSG4Q86SJ6 1040 aa15.01□□□□□ -0.01
USB1-210ENST00000565151 MCOLN2Q8IZK6 566 aa15.01□□□□□ -0.01
USB1-210ENST00000565151 ARFGAP1Q8N6T3 406 aa15.01□□□□□ -0.01
USB1-210ENST00000565151 GRIN3AQ8TCU5 1115 aa15.01□□□□□ -0.01
USB1-210ENST00000565151 SAP25Q8TEE9 199 aa15.01□□□□□ -0.01
USB1-210ENST00000565151 NTAN1Q96AB6 310 aa15.01□□□□□ -0.01
USB1-210ENST00000565151 BPIFA3Q9BQP9 254 aa15.01□□□□□ -0.01
USB1-210ENST00000565151 TRIM7Q9C029 511 aa15.01□□□□□ -0.01
USB1-210ENST00000565151 FZD3Q9NPG1 666 aa15.01□□□□□ -0.01
USB1-210ENST00000565151 TMEM248Q9NWD8 314 aa15.01□□□□□ -0.01
USB1-210ENST00000565151 COL27A1Q8IZC6 1860 aaPredicted RBP15.01□□□□□ -0.01
USB1-210ENST00000565151 LOC400499M0QZD8 3231 aa15.01□□□□□ -0.01
USB1-210ENST00000565151 ADAMTS20P59510 1910 aa15□□□□□ -0.01
USB1-210ENST00000565151 A0A1W2PQU0 124 aa15□□□□□ -0.01
USB1-210ENST00000565151 GOLGA8CPA6NN73 597 aa15□□□□□ -0.01
USB1-210ENST00000565151 SPINT1O43278 529 aa15□□□□□ -0.01
USB1-210ENST00000565151 ATMINO43313 823 aaPredicted RBP15□□□□□ -0.01
USB1-210ENST00000565151 TRIM16O95361 564 aa15□□□□□ -0.01
USB1-210ENST00000565151 CLCN6P51797 869 aa15□□□□□ -0.01
USB1-210ENST00000565151 CCNHP51946 323 aaPredicted RBP15□□□□□ -0.01
USB1-210ENST00000565151 ZNF143P52747 638 aaPredicted RBP15□□□□□ -0.01
USB1-210ENST00000565151 C21orf59P57076 290 aa15□□□□□ -0.01
USB1-210ENST00000565151 ACBD5Q5T8D3 534 aaPredicted RBP15□□□□□ -0.01
USB1-210ENST00000565151 SEL1L3Q68CR1 1132 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms