RNA–Protein interactions for RNA: ENST00000565143.1

PKM-214, Transcript of pyruvate kinase M1/2, humanhuman

TSL 1 (best)

Gene PKM, Length 2,301 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKM-214ENST00000565143 CPSF2Q9P2I0 782 aaKnown RBP12.99□□□□□ -0.33
PKM-214ENST00000565143 PRPF19Q9UMS4 504 aaKnown RBP12.99□□□□□ -0.33
PKM-214ENST00000565143 SSX2IPQ9Y2D8 614 aa12.99□□□□□ -0.33
PKM-214ENST00000565143 TIMM13Q9Y5L4 95 aaPredicted RBP12.99□□□□□ -0.33
PKM-214ENST00000565143 SNX10Q9Y5X0 201 aa12.99□□□□□ -0.33
PKM-214ENST00000565143 RGSL1A5PLK6 1076 aa12.99□□□□□ -0.33
PKM-214ENST00000565143 GRIA4P48058 902 aa12.99□□□□□ -0.33
PKM-214ENST00000565143 MRPS6P82932 125 aaKnown RBP12.99□□□□□ -0.33
PKM-214ENST00000565143 C16orf89Q6UX73 402 aa12.99□□□□□ -0.33
PKM-214ENST00000565143 LZTR1Q8N653 840 aa12.99□□□□□ -0.33
PKM-214ENST00000565143 CNTD1Q8N815 330 aa12.99□□□□□ -0.33
PKM-214ENST00000565143 STYXQ8WUJ0 223 aa12.99□□□□□ -0.33
PKM-214ENST00000565143 PTCD2Q8WV60 388 aaKnown RBP12.99□□□□□ -0.33
PKM-214ENST00000565143 IFT43Q96FT9 208 aa12.99□□□□□ -0.33
PKM-214ENST00000565143 CELF6Q96J87 481 aaKnown RBP12.99□□□□□ -0.33
PKM-214ENST00000565143 SCYL1Q96KG9 808 aa12.99□□□□□ -0.33
PKM-214ENST00000565143 LENG8Q96PV6 779 aaPredicted RBP12.99□□□□□ -0.33
PKM-214ENST00000565143 TSC22D3Q99576 134 aa12.99□□□□□ -0.33
PKM-214ENST00000565143 KLHL4Q9C0H6 718 aa12.99□□□□□ -0.33
PKM-214ENST00000565143 CHST12Q9NRB3 414 aa12.99□□□□□ -0.33
PKM-214ENST00000565143 SPATS2LQ9NUQ6 558 aaKnown RBP12.99□□□□□ -0.33
PKM-214ENST00000565143 GIT1Q9Y2X7 761 aa12.99□□□□□ -0.33
PKM-214ENST00000565143 NUP205Q92621 2012 aa12.98□□□□□ -0.33
PKM-214ENST00000565143 SMIM24O75264 130 aa12.98□□□□□ -0.33
PKM-214ENST00000565143 SNUPNO95149 360 aaKnown RBP12.98□□□□□ -0.33
PKM-214ENST00000565143 LYNP07948 512 aa12.98□□□□□ -0.33
PKM-214ENST00000565143 F7P08709 466 aaPredicted RBP12.98□□□□□ -0.33
PKM-214ENST00000565143 MPSTP25325 297 aa12.98□□□□□ -0.33
PKM-214ENST00000565143 PIK3R1P27986 724 aa12.98□□□□□ -0.33
PKM-214ENST00000565143 RPL26P61254 145 aaKnown RBP12.98□□□□□ -0.33
PKM-214ENST00000565143 BEX3Q00994 111 aa12.98□□□□□ -0.33
PKM-214ENST00000565143 OTOP3Q7RTS5 596 aa12.98□□□□□ -0.33
PKM-214ENST00000565143 PDSS2Q86YH6 399 aa12.98□□□□□ -0.33
PKM-214ENST00000565143 TMEM151AQ8N4L1 468 aa12.98□□□□□ -0.33
PKM-214ENST00000565143 ATPAF2Q8N5M1 289 aa12.98□□□□□ -0.33
PKM-214ENST00000565143 CPSF7Q8N684 471 aaKnown RBP12.98□□□□□ -0.33
PKM-214ENST00000565143 ACVR1CQ8NER5 493 aa12.98□□□□□ -0.33
PKM-214ENST00000565143 PPHLN1Q8NEY8 458 aaKnown RBP12.98□□□□□ -0.33
PKM-214ENST00000565143 RP9Q8TA86 221 aaKnown RBP12.98□□□□□ -0.33
PKM-214ENST00000565143 SHKBP1Q8TBC3 707 aa12.98□□□□□ -0.33
PKM-214ENST00000565143 DQX1Q8TE96 717 aaKnown RBP12.98□□□□□ -0.33
PKM-214ENST00000565143 MYLPFQ96A32 169 aa12.98□□□□□ -0.33
PKM-214ENST00000565143 CCDC124Q96CT7 223 aaKnown RBP12.98□□□□□ -0.33
PKM-214ENST00000565143 OR52B2Q96RD2 323 aa12.98□□□□□ -0.33
PKM-214ENST00000565143 FAM192AQ9GZU8 254 aa12.98□□□□□ -0.33
PKM-214ENST00000565143 MRM3Q9HC36 420 aaKnown RBP12.98□□□□□ -0.33
PKM-214ENST00000565143 SLC24A3Q9HC58 644 aa12.98□□□□□ -0.33
PKM-214ENST00000565143 CACNG4Q9UBN1 327 aa12.98□□□□□ -0.33
PKM-214ENST00000565143 RUVBL2Q9Y230 463 aaKnown RBP12.98□□□□□ -0.33
PKM-214ENST00000565143 ACOT9Q9Y305 439 aa12.98□□□□□ -0.33
PKM-214ENST00000565143 TRPV2Q9Y5S1 764 aa12.98□□□□□ -0.33
PKM-214ENST00000565143 COL4A4P53420 1690 aaPredicted RBP12.98□□□□□ -0.33
PKM-214ENST00000565143 IQCA1LA6NCM1 817 aa12.97□□□□□ -0.33
PKM-214ENST00000565143 MEIS3P2A8K0S8 358 aa12.97□□□□□ -0.33
PKM-214ENST00000565143 GOLGA8TH3BQL2 631 aa12.97□□□□□ -0.33
PKM-214ENST00000565143 TK2O00142 265 aa12.97□□□□□ -0.33
PKM-214ENST00000565143 FGF10O15520 208 aaPredicted RBP12.97□□□□□ -0.33
PKM-214ENST00000565143 AHCYL1O43865 530 aa12.97□□□□□ -0.33
PKM-214ENST00000565143 UPP2O95045 317 aa12.97□□□□□ -0.33
PKM-214ENST00000565143 PIGNO95427 931 aa12.97□□□□□ -0.33
PKM-214ENST00000565143 FESP07332 822 aa12.97□□□□□ -0.33
PKM-214ENST00000565143 CHRNGP07510 517 aa12.97□□□□□ -0.33
PKM-214ENST00000565143 SLC35E2BP0CK96 405 aa12.97□□□□□ -0.33
PKM-214ENST00000565143 ODC1P11926 461 aa12.97□□□□□ -0.33
PKM-214ENST00000565143 PEX19P40855 299 aa12.97□□□□□ -0.33
PKM-214ENST00000565143 GEMP55040 296 aa12.97□□□□□ -0.33
PKM-214ENST00000565143 FKBP1BP68106 108 aa12.97□□□□□ -0.33
PKM-214ENST00000565143 BRMS1LQ5PSV4 323 aa12.97□□□□□ -0.33
PKM-214ENST00000565143 RWDD4Q6NW29 188 aaKnown RBP12.97□□□□□ -0.33
PKM-214ENST00000565143 POTEHQ6S545 545 aa12.97□□□□□ -0.33
PKM-214ENST00000565143 CTU1Q7Z7A3 348 aaKnown RBP12.97□□□□□ -0.33
PKM-214ENST00000565143 METTL23Q86XA0 190 aa12.97□□□□□ -0.33
PKM-214ENST00000565143 HPS6Q86YV9 775 aa12.97□□□□□ -0.33
PKM-214ENST00000565143 USP33Q8TEY7 942 aa12.97□□□□□ -0.33
PKM-214ENST00000565143 PDCD6IPQ8WUM4 868 aaKnown RBP12.97□□□□□ -0.33
PKM-214ENST00000565143 HAPLN3Q96S86 360 aa12.97□□□□□ -0.33
PKM-214ENST00000565143 ACBD6Q9BR61 282 aa12.97□□□□□ -0.33
PKM-214ENST00000565143 UBE2OQ9C0C9 1292 aaKnown RBP12.97□□□□□ -0.33
PKM-214ENST00000565143 GLOD4Q9HC38 313 aa12.97□□□□□ -0.33
PKM-214ENST00000565143 DMAP1Q9NPF5 467 aaPredicted RBP12.97□□□□□ -0.33
PKM-214ENST00000565143 ARHGEF38Q9NXL2 777 aa12.97□□□□□ -0.33
PKM-214ENST00000565143 ST3GAL5Q9UNP4 418 aa12.97□□□□□ -0.33
PKM-214ENST00000565143 FNDC1Q4ZHG4 1894 aaPredicted RBP12.97□□□□□ -0.33
PKM-214ENST00000565143 DFFAO00273 331 aa12.97□□□□□ -0.33
PKM-214ENST00000565143 PHGDHO43175 533 aaKnown RBP12.97□□□□□ -0.33
PKM-214ENST00000565143 AHSGP02765 367 aa12.97□□□□□ -0.33
PKM-214ENST00000565143 SBK3P0C264 359 aa12.97□□□□□ -0.33
PKM-214ENST00000565143 UBTFL6P0CB48 400 aaPredicted RBP12.97□□□□□ -0.33
PKM-214ENST00000565143 PAMP19021 973 aa12.97□□□□□ -0.33
PKM-214ENST00000565143 TFEBP19484 476 aa12.97□□□□□ -0.33
PKM-214ENST00000565143 KPNA2P52292 529 aaKnown RBP12.97□□□□□ -0.33
PKM-214ENST00000565143 RAB10P61026 200 aa12.97□□□□□ -0.33
PKM-214ENST00000565143 HERC3Q15034 1050 aa12.97□□□□□ -0.33
PKM-214ENST00000565143 LSM12Q3MHD2 195 aaKnown RBP12.97□□□□□ -0.33
PKM-214ENST00000565143 ARL13AQ5H913 290 aaPredicted RBP12.97□□□□□ -0.33
PKM-214ENST00000565143 LRRC8EQ6NSJ5 796 aa12.97□□□□□ -0.33
PKM-214ENST00000565143 FAM171BQ6P995 826 aa12.97□□□□□ -0.33
PKM-214ENST00000565143 TMC7Q7Z402 723 aa12.97□□□□□ -0.33
PKM-214ENST00000565143 KBTBD6Q86V97 674 aa12.97□□□□□ -0.33
PKM-214ENST00000565143 KYQ8NBH2 561 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms