RNA–Protein interactions for RNA: ENST00000565003.5

CMTM3-209, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-209ENST00000565003 NAPEPLDQ6IQ20 393 aa10.25□□□□□ -0.77
CMTM3-209ENST00000565003 RWDD4Q6NW29 188 aaKnown RBP10.25□□□□□ -0.77
CMTM3-209ENST00000565003 WDR59Q6PJI9 974 aa10.25□□□□□ -0.77
CMTM3-209ENST00000565003 ZNF783Q6ZMS7 281 aa10.25□□□□□ -0.77
CMTM3-209ENST00000565003 DPY19L3Q6ZPD9 716 aa10.25□□□□□ -0.77
CMTM3-209ENST00000565003 NLRP14Q86W24 1093 aa10.25□□□□□ -0.77
CMTM3-209ENST00000565003 TRIM69Q86WT6 500 aa10.25□□□□□ -0.77
CMTM3-209ENST00000565003 GATAD2AQ86YP4 633 aa10.25□□□□□ -0.77
CMTM3-209ENST00000565003 KDF1Q8NAX2 398 aaPredicted RBP10.25□□□□□ -0.77
CMTM3-209ENST00000565003 C3orf20Q8ND61 904 aa10.25□□□□□ -0.77
CMTM3-209ENST00000565003 FAM172AQ8WUF8 416 aa10.25□□□□□ -0.77
CMTM3-209ENST00000565003 CCDC114Q96M63 670 aa10.25□□□□□ -0.77
CMTM3-209ENST00000565003 CDC6Q99741 560 aa10.25□□□□□ -0.77
CMTM3-209ENST00000565003 SELENOOQ9BVL4 669 aa10.25□□□□□ -0.77
CMTM3-209ENST00000565003 OSBPL2Q9H1P3 480 aa10.25□□□□□ -0.77
CMTM3-209ENST00000565003 KDM4CQ9H3R0 1056 aa10.25□□□□□ -0.77
CMTM3-209ENST00000565003 TPX2Q9ULW0 747 aaKnown RBP10.25□□□□□ -0.77
CMTM3-209ENST00000565003 APOBEC2Q9Y235 224 aaKnown RBP10.25□□□□□ -0.77
CMTM3-209ENST00000565003 CA5BQ9Y2D0 317 aa10.25□□□□□ -0.77
CMTM3-209ENST00000565003 FCF1Q9Y324 198 aaKnown RBP10.25□□□□□ -0.77
CMTM3-209ENST00000565003 FARP1Q9Y4F1 1045 aaPredicted RBP10.25□□□□□ -0.77
CMTM3-209ENST00000565003 ZFHX4Q86UP3 3567 aa10.25□□□□□ -0.77
CMTM3-209ENST00000565003 CHD5Q8TDI0 1954 aa10.25□□□□□ -0.77
CMTM3-209ENST00000565003 AKAP13Q12802 2813 aa10.25□□□□□ -0.77
CMTM3-209ENST00000565003 SIGLEC16A6NMB1 481 aa10.24□□□□□ -0.77
CMTM3-209ENST00000565003 GOLGA8CPA6NN73 597 aa10.24□□□□□ -0.77
CMTM3-209ENST00000565003 TLR4O00206 839 aa10.24□□□□□ -0.77
CMTM3-209ENST00000565003 CCP110O43303 1012 aa10.24□□□□□ -0.77
CMTM3-209ENST00000565003 DFNA5O60443 496 aa10.24□□□□□ -0.77
CMTM3-209ENST00000565003 LEFTY1O75610 366 aa10.24□□□□□ -0.77
CMTM3-209ENST00000565003 DKK1O94907 266 aa10.24□□□□□ -0.77
CMTM3-209ENST00000565003 CD160O95971 181 aa10.24□□□□□ -0.77
CMTM3-209ENST00000565003 PRNPP04156 253 aa10.24□□□□□ -0.77
CMTM3-209ENST00000565003 CALB1P05937 261 aa10.24□□□□□ -0.77
CMTM3-209ENST00000565003 GPD1P21695 349 aa10.24□□□□□ -0.77
CMTM3-209ENST00000565003 RPL7AP62424 266 aaKnown RBP10.24□□□□□ -0.77
CMTM3-209ENST00000565003 RETSATQ6NUM9 610 aa10.24□□□□□ -0.77
CMTM3-209ENST00000565003 PRPF39Q86UA1 669 aaKnown RBP10.24□□□□□ -0.77
CMTM3-209ENST00000565003 SPATS2Q86XZ4 545 aaKnown RBP10.24□□□□□ -0.77
CMTM3-209ENST00000565003 PYROXD2Q8N2H3 581 aa10.24□□□□□ -0.77
CMTM3-209ENST00000565003 MFSD2AQ8NA29 543 aa10.24□□□□□ -0.77
CMTM3-209ENST00000565003 TMIEQ8NEW7 156 aa10.24□□□□□ -0.77
CMTM3-209ENST00000565003 ZCCHC14Q8WYQ9 949 aaKnown RBP10.24□□□□□ -0.77
CMTM3-209ENST00000565003 BAP1Q92560 729 aa10.24□□□□□ -0.77
CMTM3-209ENST00000565003 NTAN1Q96AB6 310 aa10.24□□□□□ -0.77
CMTM3-209ENST00000565003 SKA1Q96BD8 255 aa10.24□□□□□ -0.77
CMTM3-209ENST00000565003 MCEEQ96PE7 176 aa10.24□□□□□ -0.77
CMTM3-209ENST00000565003 AGPAT1Q99943 283 aa10.24□□□□□ -0.77
CMTM3-209ENST00000565003 BPIFA3Q9BQP9 254 aa10.24□□□□□ -0.77
CMTM3-209ENST00000565003 SYT11Q9BT88 431 aa10.24□□□□□ -0.77
CMTM3-209ENST00000565003 CEP44Q9C0F1 390 aa10.24□□□□□ -0.77
CMTM3-209ENST00000565003 PREBQ9HCU5 417 aa10.24□□□□□ -0.77
CMTM3-209ENST00000565003 GDF3Q9NR23 364 aa10.24□□□□□ -0.77
CMTM3-209ENST00000565003 TMEM248Q9NWD8 314 aa10.24□□□□□ -0.77
CMTM3-209ENST00000565003 TAS2R14Q9NYV8 317 aa10.24□□□□□ -0.77
CMTM3-209ENST00000565003 IL36AQ9UHA7 158 aa10.24□□□□□ -0.77
CMTM3-209ENST00000565003 DNAI1Q9UI46 699 aa10.24□□□□□ -0.77
CMTM3-209ENST00000565003 WASF2Q9Y6W5 498 aa10.24□□□□□ -0.77
CMTM3-209ENST00000565003 A0A1W2PQU0 124 aa10.23□□□□□ -0.77
CMTM3-209ENST00000565003 TMEM8BA6NDV4 472 aa10.23□□□□□ -0.77
CMTM3-209ENST00000565003 SLC31A1O15431 190 aa10.23□□□□□ -0.77
CMTM3-209ENST00000565003 TNFSF14O43557 240 aa10.23□□□□□ -0.77
CMTM3-209ENST00000565003 RNGTTO60942 597 aaKnown RBP10.23□□□□□ -0.77
CMTM3-209ENST00000565003 PLEKP08567 350 aaPredicted RBP10.23□□□□□ -0.77
CMTM3-209ENST00000565003 PRLRP16471 622 aa10.23□□□□□ -0.77
CMTM3-209ENST00000565003 FERP16591 822 aa10.23□□□□□ -0.77
CMTM3-209ENST00000565003 RHOQP17081 205 aa10.23□□□□□ -0.77
CMTM3-209ENST00000565003 EPHA8P29322 1005 aaPredicted RBP10.23□□□□□ -0.77
CMTM3-209ENST00000565003 RECQLP46063 649 aaPredicted RBP10.23□□□□□ -0.77
CMTM3-209ENST00000565003 MAPKAPK2P49137 400 aa10.23□□□□□ -0.77
CMTM3-209ENST00000565003 DNA2P51530 1060 aa10.23□□□□□ -0.77
CMTM3-209ENST00000565003 CCNHP51946 323 aaPredicted RBP10.23□□□□□ -0.77
CMTM3-209ENST00000565003 ZNF143P52747 638 aaPredicted RBP10.23□□□□□ -0.77
CMTM3-209ENST00000565003 OGDHQ02218 1023 aa10.23□□□□□ -0.77
CMTM3-209ENST00000565003 SLC20A2Q08357 652 aa10.23□□□□□ -0.77
CMTM3-209ENST00000565003 SCAPQ12770 1279 aa10.23□□□□□ -0.77
CMTM3-209ENST00000565003 ZNF284Q2VY69 593 aa10.23□□□□□ -0.77
CMTM3-209ENST00000565003 SETMARQ53H47 684 aaPredicted RBP10.23□□□□□ -0.77
CMTM3-209ENST00000565003 SLC45A4Q5BKX6 768 aa10.23□□□□□ -0.77
CMTM3-209ENST00000565003 CARD16Q5EG05 197 aa10.23□□□□□ -0.77
CMTM3-209ENST00000565003 ARSIQ5FYB1 569 aa10.23□□□□□ -0.77
CMTM3-209ENST00000565003 PPP1R15BQ5SWA1 713 aa10.23□□□□□ -0.77
CMTM3-209ENST00000565003 CAVIN1Q6NZI2 390 aaKnown RBP10.23□□□□□ -0.77
CMTM3-209ENST00000565003 DNAJC24Q6P3W2 148 aa10.23□□□□□ -0.77
CMTM3-209ENST00000565003 LEKR1Q6ZMV7 388 aa10.23□□□□□ -0.77
CMTM3-209ENST00000565003 ERN2Q76MJ5 926 aaKnown RBP10.23□□□□□ -0.77
CMTM3-209ENST00000565003 IRF2BP2Q7Z5L9 587 aa10.23□□□□□ -0.77
CMTM3-209ENST00000565003 IQCHQ86VS3 1027 aa10.23□□□□□ -0.77
CMTM3-209ENST00000565003 MCOLN2Q8IZK6 566 aa10.23□□□□□ -0.77
CMTM3-209ENST00000565003 PCDH20Q8N6Y1 951 aaKnown RBP10.23□□□□□ -0.77
CMTM3-209ENST00000565003 TMEM145Q8NBT3 493 aa10.23□□□□□ -0.77
CMTM3-209ENST00000565003 SAP25Q8TEE9 199 aa10.23□□□□□ -0.77
CMTM3-209ENST00000565003 KLK6Q92876 244 aa10.23□□□□□ -0.77
CMTM3-209ENST00000565003 ARHGEF2Q92974 986 aaKnown RBP10.23□□□□□ -0.77
CMTM3-209ENST00000565003 TBC1D31Q96DN5 1066 aa10.23□□□□□ -0.77
CMTM3-209ENST00000565003 MYOCQ99972 504 aa10.23□□□□□ -0.77
CMTM3-209ENST00000565003 HDAC8Q9BY41 377 aa10.23□□□□□ -0.77
CMTM3-209ENST00000565003 TM6SF2Q9BZW4 377 aa10.23□□□□□ -0.77
CMTM3-209ENST00000565003 NAT10Q9H0A0 1025 aaKnown RBP10.23□□□□□ -0.77
CMTM3-209ENST00000565003 FZD3Q9NPG1 666 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms