RNA–Protein interactions for RNA: ENST00000564752.1

CLN6-204, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 900 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-204ENST00000564752 MAGEC1O60732 1142 aa18.92■□□□□ 0.62
CLN6-204ENST00000564752 CTSLP07711 333 aa18.92■□□□□ 0.62
CLN6-204ENST00000564752 C1SP09871 688 aa18.92■□□□□ 0.62
CLN6-204ENST00000564752 NSFP46459 744 aaKnown RBP18.92■□□□□ 0.62
CLN6-204ENST00000564752 ZNF165P49910 485 aa18.92■□□□□ 0.62
CLN6-204ENST00000564752 TAS2R38P59533 333 aa18.92■□□□□ 0.62
CLN6-204ENST00000564752 CYP4F3Q08477 520 aa18.92■□□□□ 0.62
CLN6-204ENST00000564752 DNAJC3Q13217 504 aa18.92■□□□□ 0.62
CLN6-204ENST00000564752 STAT4Q14765 748 aa18.92■□□□□ 0.62
CLN6-204ENST00000564752 ARTNQ5T4W7 220 aa18.92■□□□□ 0.62
CLN6-204ENST00000564752 TRNP1Q6NT89 227 aa18.92■□□□□ 0.62
CLN6-204ENST00000564752 LRRC31Q6UY01 552 aa18.92■□□□□ 0.62
CLN6-204ENST00000564752 ARCQ7LC44 396 aa18.92■□□□□ 0.62
CLN6-204ENST00000564752 TMIEQ8NEW7 156 aa18.92■□□□□ 0.62
CLN6-204ENST00000564752 SLC30A5Q8TAD4 765 aa18.92■□□□□ 0.62
CLN6-204ENST00000564752 CFAP57Q96MR6 1250 aa18.92■□□□□ 0.62
CLN6-204ENST00000564752 PREBQ9HCU5 417 aa18.92■□□□□ 0.62
CLN6-204ENST00000564752 TMPRSS4Q9NRS4 437 aa18.92■□□□□ 0.62
CLN6-204ENST00000564752 IGLV3-10A0A075B6K4 115 aa18.91■□□□□ 0.62
CLN6-204ENST00000564752 A0A0D9SEW6 157 aa18.91■□□□□ 0.62
CLN6-204ENST00000564752 PRAMEF26H0Y7S4 382 aa18.91■□□□□ 0.62
CLN6-204ENST00000564752 SMAD6O43541 496 aaKnown RBP18.91■□□□□ 0.62
CLN6-204ENST00000564752 CDK4P11802 303 aa18.91■□□□□ 0.62
CLN6-204ENST00000564752 CHRNA3P32297 505 aa18.91■□□□□ 0.62
CLN6-204ENST00000564752 FILIP1LQ4L180 1135 aa18.91■□□□□ 0.62
CLN6-204ENST00000564752 SETMARQ53H47 684 aaPredicted RBP18.91■□□□□ 0.62
CLN6-204ENST00000564752 PIP5KL1Q5T9C9 394 aa18.91■□□□□ 0.62
CLN6-204ENST00000564752 SFMBT2Q5VUG0 894 aa18.91■□□□□ 0.62
CLN6-204ENST00000564752 KANSL1Q7Z3B3 1105 aa18.91■□□□□ 0.62
CLN6-204ENST00000564752 BNIPLQ7Z465 357 aa18.91■□□□□ 0.62
CLN6-204ENST00000564752 EMC1Q8N766 993 aa18.91■□□□□ 0.62
CLN6-204ENST00000564752 DCAF4L2Q8NA75 395 aa18.91■□□□□ 0.62
CLN6-204ENST00000564752 TSC1Q92574 1164 aa18.91■□□□□ 0.62
CLN6-204ENST00000564752 MPP6Q9NZW5 540 aa18.91■□□□□ 0.62
CLN6-204ENST00000564752 E9PAM4 449 aa18.9■□□□□ 0.62
CLN6-204ENST00000564752 TEX33O43247 280 aa18.9■□□□□ 0.62
CLN6-204ENST00000564752 RNGTTO60942 597 aaKnown RBP18.9■□□□□ 0.62
CLN6-204ENST00000564752 RFPL3O75679 317 aa18.9■□□□□ 0.62
CLN6-204ENST00000564752 CCDC172P0C7W6 258 aa18.9■□□□□ 0.62
CLN6-204ENST00000564752 UNGP13051 313 aaPredicted RBP18.9■□□□□ 0.62
CLN6-204ENST00000564752 RRM1P23921 792 aa18.9■□□□□ 0.62
CLN6-204ENST00000564752 ACADVLP49748 655 aa18.9■□□□□ 0.62
CLN6-204ENST00000564752 CLCN6P51797 869 aa18.9■□□□□ 0.62
CLN6-204ENST00000564752 ATP11AP98196 1134 aa18.9■□□□□ 0.62
CLN6-204ENST00000564752 CCDC15Q0P6D6 951 aa18.9■□□□□ 0.62
CLN6-204ENST00000564752 CLEC16AQ2KHT3 1053 aa18.9■□□□□ 0.62
CLN6-204ENST00000564752 KLHL40Q2TBA0 621 aa18.9■□□□□ 0.62
CLN6-204ENST00000564752 C6orf118Q5T5N4 469 aa18.9■□□□□ 0.62
CLN6-204ENST00000564752 NEK5Q6P3R8 708 aa18.9■□□□□ 0.62
CLN6-204ENST00000564752 TFAP2DQ7Z6R9 452 aa18.9■□□□□ 0.62
CLN6-204ENST00000564752 PHLDB2Q86SQ0 1253 aa18.9■□□□□ 0.62
CLN6-204ENST00000564752 ARRDC3Q96B67 414 aa18.9■□□□□ 0.62
CLN6-204ENST00000564752 CCDC114Q96M63 670 aa18.9■□□□□ 0.62
CLN6-204ENST00000564752 HAPLN3Q96S86 360 aa18.9■□□□□ 0.62
CLN6-204ENST00000564752 PCDHB18PQ96TA0 734 aa18.9■□□□□ 0.62
CLN6-204ENST00000564752 RTN4Q9NQC3 1192 aaKnown RBP18.9■□□□□ 0.62
CLN6-204ENST00000564752 ZNF212Q9UDV6 495 aa18.9■□□□□ 0.62
CLN6-204ENST00000564752 CA5BQ9Y2D0 317 aa18.9■□□□□ 0.62
CLN6-204ENST00000564752 URB1O60287 2271 aaKnown RBP18.9■□□□□ 0.62
CLN6-204ENST00000564752 FASNP49327 2511 aaKnown RBP18.89■□□□□ 0.61
CLN6-204ENST00000564752 ILVBLA1L0T0 632 aa18.89■□□□□ 0.61
CLN6-204ENST00000564752 KPNA3O00505 521 aaPredicted RBP18.89■□□□□ 0.61
CLN6-204ENST00000564752 SRGAP2O75044 1071 aa18.89■□□□□ 0.61
CLN6-204ENST00000564752 FERP16591 822 aa18.89■□□□□ 0.61
CLN6-204ENST00000564752 OR1E1P30953 314 aa18.89■□□□□ 0.61
CLN6-204ENST00000564752 SDC4P31431 198 aa18.89■□□□□ 0.61
CLN6-204ENST00000564752 CDO1Q16878 200 aa18.89■□□□□ 0.61
CLN6-204ENST00000564752 COL28A1Q2UY09 1125 aa18.89■□□□□ 0.61
CLN6-204ENST00000564752 LINGO4Q6UY18 593 aa18.89■□□□□ 0.61
CLN6-204ENST00000564752 FAM131BQ86XD5 332 aa18.89■□□□□ 0.61
CLN6-204ENST00000564752 TMEM145Q8NBT3 493 aa18.89■□□□□ 0.61
CLN6-204ENST00000564752 CHST14Q8NCH0 376 aa18.89■□□□□ 0.61
CLN6-204ENST00000564752 HNRNPLLQ8WVV9 542 aaKnown RBP18.89■□□□□ 0.61
CLN6-204ENST00000564752 KLHDC7BQ96G42 594 aa18.89■□□□□ 0.61
CLN6-204ENST00000564752 FUCA2Q9BTY2 467 aa18.89■□□□□ 0.61
CLN6-204ENST00000564752 ADAM22Q9P0K1 906 aa18.89■□□□□ 0.61
CLN6-204ENST00000564752 COL5A1P20908 1838 aaPredicted RBP18.88■□□□□ 0.61
CLN6-204ENST00000564752 SMG1Q96Q15 3661 aaKnown RBP18.88■□□□□ 0.61
CLN6-204ENST00000564752 DOCK4Q8N1I0 1966 aa18.88■□□□□ 0.61
CLN6-204ENST00000564752 A0A1W2PQU0 124 aa18.88■□□□□ 0.61
CLN6-204ENST00000564752 SYCE3A1L190 88 aa18.88■□□□□ 0.61
CLN6-204ENST00000564752 RNF103O00237 685 aa18.88■□□□□ 0.61
CLN6-204ENST00000564752 SLC31A1O15431 190 aa18.88■□□□□ 0.61
CLN6-204ENST00000564752 ZNF821O75541 412 aaPredicted RBP18.88■□□□□ 0.61
CLN6-204ENST00000564752 PRNPP04156 253 aa18.88■□□□□ 0.61
CLN6-204ENST00000564752 CALB1P05937 261 aa18.88■□□□□ 0.61
CLN6-204ENST00000564752 JUPP14923 745 aa18.88■□□□□ 0.61
CLN6-204ENST00000564752 GLDCP23378 1020 aa18.88■□□□□ 0.61
CLN6-204ENST00000564752 GSCP56915 257 aaPredicted RBP18.88■□□□□ 0.61
CLN6-204ENST00000564752 PTP4A2Q12974 167 aa18.88■□□□□ 0.61
CLN6-204ENST00000564752 ZNF783Q6ZMS7 281 aa18.88■□□□□ 0.61
CLN6-204ENST00000564752 HORMAD1Q86X24 394 aa18.88■□□□□ 0.61
CLN6-204ENST00000564752 PHF13Q86YI8 300 aaPredicted RBP18.88■□□□□ 0.61
CLN6-204ENST00000564752 OR7D4Q8NG98 312 aa18.88■□□□□ 0.61
CLN6-204ENST00000564752 JOSD2Q8TAC2 188 aa18.88■□□□□ 0.61
CLN6-204ENST00000564752 RXFP2Q8WXD0 754 aa18.88■□□□□ 0.61
CLN6-204ENST00000564752 AGPAT1Q99943 283 aa18.88■□□□□ 0.61
CLN6-204ENST00000564752 SELENOOQ9BVL4 669 aa18.88■□□□□ 0.61
CLN6-204ENST00000564752 HDAC8Q9BY41 377 aa18.88■□□□□ 0.61
CLN6-204ENST00000564752 SCUBE2Q9NQ36 999 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms