RNA–Protein interactions for RNA: ENST00000564582.2

CHD9-210, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 968 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-210ENST00000564582 SPCS2Q15005 226 aa5.76□□□□□ -1.49
CHD9-210ENST00000564582 ELAVL1Q15717 326 aaKnown RBP5.76□□□□□ -1.49
CHD9-210ENST00000564582 NFIL3Q16649 462 aa5.76□□□□□ -1.49
CHD9-210ENST00000564582 EXOC3L4Q17RC7 722 aa5.76□□□□□ -1.49
CHD9-210ENST00000564582 MMEL1Q495T6 779 aa5.76□□□□□ -1.49
CHD9-210ENST00000564582 ANKRD20A4Q4UJ75 823 aa5.76□□□□□ -1.49
CHD9-210ENST00000564582 LGSNQ5TDP6 509 aa5.76□□□□□ -1.49
CHD9-210ENST00000564582 WDR78Q5VTH9 848 aa5.76□□□□□ -1.49
CHD9-210ENST00000564582 MBNL2Q5VZF2 373 aaKnown RBP5.76□□□□□ -1.49
CHD9-210ENST00000564582 ATG16L1Q676U5 607 aa5.76□□□□□ -1.49
CHD9-210ENST00000564582 KRT39Q6A163 491 aa5.76□□□□□ -1.49
CHD9-210ENST00000564582 CCDC137Q6PK04 289 aaKnown RBP5.76□□□□□ -1.49
CHD9-210ENST00000564582 MAMDC4Q6UXC1 1216 aa5.76□□□□□ -1.49
CHD9-210ENST00000564582 PDZD4Q76G19 769 aaPredicted RBP5.76□□□□□ -1.49
CHD9-210ENST00000564582 MIGA2Q7L4E1 593 aa5.76□□□□□ -1.49
CHD9-210ENST00000564582 NLRP9Q7RTR0 991 aa5.76□□□□□ -1.49
CHD9-210ENST00000564582 KRT27Q7Z3Y8 459 aa5.76□□□□□ -1.49
CHD9-210ENST00000564582 CLNKQ7Z7G1 428 aa5.76□□□□□ -1.49
CHD9-210ENST00000564582 LRRC6Q86X45 466 aa5.76□□□□□ -1.49
CHD9-210ENST00000564582 DGKHQ86XP1 1220 aa5.76□□□□□ -1.49
CHD9-210ENST00000564582 TBC1D10CQ8IV04 446 aa5.76□□□□□ -1.49
CHD9-210ENST00000564582 SCYL3Q8IZE3 742 aa5.76□□□□□ -1.49
CHD9-210ENST00000564582 MARVELD2Q8N4S9 558 aa5.76□□□□□ -1.49
CHD9-210ENST00000564582 ZNF808Q8N4W9 903 aaPredicted RBP5.76□□□□□ -1.49
CHD9-210ENST00000564582 OR6Y1Q8NGX8 325 aa5.76□□□□□ -1.49
CHD9-210ENST00000564582 ZNF480Q8WV37 535 aa5.76□□□□□ -1.49
CHD9-210ENST00000564582 LARP4BQ92615 738 aaKnown RBP5.76□□□□□ -1.49
CHD9-210ENST00000564582 CASP10Q92851 521 aa5.76□□□□□ -1.49
CHD9-210ENST00000564582 BORCS5Q969J3 196 aa5.76□□□□□ -1.49
CHD9-210ENST00000564582 SLC35B4Q969S0 331 aa5.76□□□□□ -1.49
CHD9-210ENST00000564582 CMTM5Q96DZ9 223 aa5.76□□□□□ -1.49
CHD9-210ENST00000564582 ABHD8Q96I13 439 aa5.76□□□□□ -1.49
CHD9-210ENST00000564582 MPP4Q96JB8 637 aa5.76□□□□□ -1.49
CHD9-210ENST00000564582 ZNF512Q96ME7 567 aaPredicted RBP5.76□□□□□ -1.49
CHD9-210ENST00000564582 LSM14BQ9BX40 385 aaKnown RBP5.76□□□□□ -1.49
CHD9-210ENST00000564582 BRIP1Q9BX63 1249 aa5.76□□□□□ -1.49
CHD9-210ENST00000564582 AP1M1Q9BXS5 423 aa5.76□□□□□ -1.49
CHD9-210ENST00000564582 KRTAP3-1Q9BYR8 98 aa5.76□□□□□ -1.49
CHD9-210ENST00000564582 STK33Q9BYT3 514 aa5.76□□□□□ -1.49
CHD9-210ENST00000564582 FRMD8P1Q9BZ68 369 aaPredicted RBP5.76□□□□□ -1.49
CHD9-210ENST00000564582 IMPG2Q9BZV3 1241 aa5.76□□□□□ -1.49
CHD9-210ENST00000564582 WWP1Q9H0M0 922 aa5.76□□□□□ -1.49
CHD9-210ENST00000564582 GREM2Q9H772 168 aa5.76□□□□□ -1.49
CHD9-210ENST00000564582 ZNF696Q9H7X3 374 aa5.76□□□□□ -1.49
CHD9-210ENST00000564582 C6orf50Q9HD87 102 aa5.76□□□□□ -1.49
CHD9-210ENST00000564582 CD209Q9NNX6 404 aa5.76□□□□□ -1.49
CHD9-210ENST00000564582 C8orf4Q9NR00 106 aa5.76□□□□□ -1.49
CHD9-210ENST00000564582 GJB4Q9NTQ9 266 aa5.76□□□□□ -1.49
CHD9-210ENST00000564582 ATAD3AQ9NVI7 634 aa5.76□□□□□ -1.49
CHD9-210ENST00000564582 MKS1Q9NXB0 559 aa5.76□□□□□ -1.49
CHD9-210ENST00000564582 NKX1-2Q9UD57 310 aaPredicted RBP5.76□□□□□ -1.49
CHD9-210ENST00000564582 RSL24D1Q9UHA3 163 aaKnown RBP5.76□□□□□ -1.49
CHD9-210ENST00000564582 HAO1Q9UJM8 370 aa5.76□□□□□ -1.49
CHD9-210ENST00000564582 DNAJC12Q9UKB3 198 aa5.76□□□□□ -1.49
CHD9-210ENST00000564582 NENFQ9UMX5 172 aa5.76□□□□□ -1.49
CHD9-210ENST00000564582 CHMP2BQ9UQN3 213 aa5.76□□□□□ -1.49
CHD9-210ENST00000564582 CHKBQ9Y259 395 aa5.76□□□□□ -1.49
CHD9-210ENST00000564582 B3GNT3Q9Y2A9 372 aa5.76□□□□□ -1.49
CHD9-210ENST00000564582 GIT1Q9Y2X7 761 aa5.76□□□□□ -1.49
CHD9-210ENST00000564582 TTLL3Q9Y4R7 772 aa5.76□□□□□ -1.49
CHD9-210ENST00000564582 AP4S1Q9Y587 144 aa5.76□□□□□ -1.49
CHD9-210ENST00000564582 SCINQ9Y6U3 715 aa5.76□□□□□ -1.49
CHD9-210ENST00000564582 COL22A1Q8NFW1 1626 aaPredicted RBP5.76□□□□□ -1.49
CHD9-210ENST00000564582 DIP2CQ9Y2E4 1556 aa5.76□□□□□ -1.49
CHD9-210ENST00000564582 TIAM2Q8IVF5 1701 aa5.75□□□□□ -1.49
CHD9-210ENST00000564582 hCG_2014768A0A024R1R8 64 aa5.75□□□□□ -1.49
CHD9-210ENST00000564582 A0A0J9YVX5 310 aa5.75□□□□□ -1.49
CHD9-210ENST00000564582 ESYT2A0FGR8 921 aa5.75□□□□□ -1.49
CHD9-210ENST00000564582 C1QTNF3-AMACRE9PGA6 284 aa5.75□□□□□ -1.49
CHD9-210ENST00000564582 PDXKO00764 312 aa5.75□□□□□ -1.49
CHD9-210ENST00000564582 CASQ2O14958 399 aaPredicted RBP5.75□□□□□ -1.49
CHD9-210ENST00000564582 MGEA5O60502 916 aa5.75□□□□□ -1.49
CHD9-210ENST00000564582 TMEM127O75204 238 aa5.75□□□□□ -1.49
CHD9-210ENST00000564582 TBX10O75333 385 aa5.75□□□□□ -1.49
CHD9-210ENST00000564582 SPAG6O75602 509 aa5.75□□□□□ -1.49
CHD9-210ENST00000564582 TRMUO75648 421 aaKnown RBP5.75□□□□□ -1.49
CHD9-210ENST00000564582 FAM155BO75949 473 aa5.75□□□□□ -1.49
CHD9-210ENST00000564582 CSF1RP07333 972 aa5.75□□□□□ -1.49
CHD9-210ENST00000564582 ALOX5P09917 674 aa5.75□□□□□ -1.49
CHD9-210ENST00000564582 RARBP10826 455 aa5.75□□□□□ -1.49
CHD9-210ENST00000564582 ANPEPP15144 967 aa5.75□□□□□ -1.49
CHD9-210ENST00000564582 UCHL3P15374 230 aa5.75□□□□□ -1.49
CHD9-210ENST00000564582 PTPN2P17706 415 aa5.75□□□□□ -1.49
CHD9-210ENST00000564582 KRT4P19013 534 aa5.75□□□□□ -1.49
CHD9-210ENST00000564582 CYP11B2P19099 503 aa5.75□□□□□ -1.49
CHD9-210ENST00000564582 HMOX2P30519 316 aa5.75□□□□□ -1.49
CHD9-210ENST00000564582 HOXD12P35452 270 aa5.75□□□□□ -1.49
CHD9-210ENST00000564582 MTNR1BP49286 362 aa5.75□□□□□ -1.49
CHD9-210ENST00000564582 CCT8P50990 548 aa5.75□□□□□ -1.49
CHD9-210ENST00000564582 ARFIP2P53365 341 aa5.75□□□□□ -1.49
CHD9-210ENST00000564582 GEMIN4P57678 1058 aaKnown RBP5.75□□□□□ -1.49
CHD9-210ENST00000564582 CDK16Q00536 496 aa5.75□□□□□ -1.49
CHD9-210ENST00000564582 PPATQ06203 517 aa5.75□□□□□ -1.49
CHD9-210ENST00000564582 STK4Q13043 487 aa5.75□□□□□ -1.49
CHD9-210ENST00000564582 PTK6Q13882 451 aa5.75□□□□□ -1.49
CHD9-210ENST00000564582 TNIP1Q15025 636 aa5.75□□□□□ -1.49
CHD9-210ENST00000564582 BCL2A1Q16548 175 aa5.75□□□□□ -1.49
CHD9-210ENST00000564582 KLHL38Q2WGJ6 581 aa5.75□□□□□ -1.49
CHD9-210ENST00000564582 ZNF829Q3KNS6 432 aaPredicted RBP5.75□□□□□ -1.49
CHD9-210ENST00000564582 USP41Q3LFD5 358 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms