RNA–Protein interactions for RNA: ENST00000564255.5

CHD9-209, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 2,896 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-209ENST00000564255 CPA2P48052 419 aa2.75□□□□□ -1.97
CHD9-209ENST00000564255 EFNA5P52803 228 aa2.75□□□□□ -1.97
CHD9-209ENST00000564255 PLP2Q04941 152 aa2.75□□□□□ -1.97
CHD9-209ENST00000564255 FOXI1Q12951 378 aa2.75□□□□□ -1.97
CHD9-209ENST00000564255 IRF3Q14653 427 aa2.75□□□□□ -1.97
CHD9-209ENST00000564255 ZNF169Q14929 603 aaPredicted RBP2.75□□□□□ -1.97
CHD9-209ENST00000564255 PTPAQ15257 358 aa2.75□□□□□ -1.97
CHD9-209ENST00000564255 CCDC184Q52MB2 194 aa2.75□□□□□ -1.97
CHD9-209ENST00000564255 ARMC3Q5W041 872 aa2.75□□□□□ -1.97
CHD9-209ENST00000564255 CEP85Q6P2H3 762 aa2.75□□□□□ -1.97
CHD9-209ENST00000564255 TMEM65Q6PI78 240 aa2.75□□□□□ -1.97
CHD9-209ENST00000564255 PRSS45Q7RTY3 260 aa2.75□□□□□ -1.97
CHD9-209ENST00000564255 SLC46A3Q7Z3Q1 461 aa2.75□□□□□ -1.97
CHD9-209ENST00000564255 FAM9BQ8IZU0 186 aa2.75□□□□□ -1.97
CHD9-209ENST00000564255 SCAIQ8N9R8 606 aa2.75□□□□□ -1.97
CHD9-209ENST00000564255 TMEM116Q8NCL8 245 aa2.75□□□□□ -1.97
CHD9-209ENST00000564255 ACTRT2Q8TDY3 377 aa2.75□□□□□ -1.97
CHD9-209ENST00000564255 TMEM170AQ8WVE7 144 aa2.75□□□□□ -1.97
CHD9-209ENST00000564255 POMGNT1Q8WZA1 660 aa2.75□□□□□ -1.97
CHD9-209ENST00000564255 ADAD1Q96M93 576 aaKnown RBP2.75□□□□□ -1.97
CHD9-209ENST00000564255 AP1M1Q9BXS5 423 aa2.75□□□□□ -1.97
CHD9-209ENST00000564255 ATP8A2Q9NTI2 1148 aa2.75□□□□□ -1.97
CHD9-209ENST00000564255 ARL15Q9NXU5 204 aa2.75□□□□□ -1.97
CHD9-209ENST00000564255 LRIT1Q9P2V4 623 aa2.75□□□□□ -1.97
CHD9-209ENST00000564255 GIMAP2Q9UG22 337 aa2.75□□□□□ -1.97
CHD9-209ENST00000564255 RPS6KA6Q9UK32 745 aa2.75□□□□□ -1.97
CHD9-209ENST00000564255 INTS6Q9UL03 887 aaKnown RBP2.75□□□□□ -1.97
CHD9-209ENST00000564255 A0A1W2PRG0 241 aa2.75□□□□□ -1.97
CHD9-209ENST00000564255 CBY3A6NI87 242 aa2.75□□□□□ -1.97
CHD9-209ENST00000564255 H7C0S8 307 aa2.75□□□□□ -1.97
CHD9-209ENST00000564255 SERPINC1P01008 464 aa2.75□□□□□ -1.97
CHD9-209ENST00000564255 RARGP13631 454 aa2.75□□□□□ -1.97
CHD9-209ENST00000564255 FMO4P31512 558 aa2.75□□□□□ -1.97
CHD9-209ENST00000564255 PRAMEP78395 509 aa2.75□□□□□ -1.97
CHD9-209ENST00000564255 HOXA4Q00056 320 aaPredicted RBP2.75□□□□□ -1.97
CHD9-209ENST00000564255 NIPAL4Q0D2K0 466 aa2.75□□□□□ -1.97
CHD9-209ENST00000564255 MED22Q15528 200 aa2.75□□□□□ -1.97
CHD9-209ENST00000564255 ALDH1L2Q3SY69 923 aa2.75□□□□□ -1.97
CHD9-209ENST00000564255 SPECC1Q5M775 1068 aa2.75□□□□□ -1.97
CHD9-209ENST00000564255 TTI2Q6NXR4 508 aa2.75□□□□□ -1.97
CHD9-209ENST00000564255 IL20RBQ6UXL0 311 aa2.75□□□□□ -1.97
CHD9-209ENST00000564255 TFAP2DQ7Z6R9 452 aa2.75□□□□□ -1.97
CHD9-209ENST00000564255 SUGP2Q8IX01 1082 aaKnown RBP eCLIP2.75□□□□□ -1.97
CHD9-209ENST00000564255 SLC44A3Q8N4M1 653 aa2.75□□□□□ -1.97
CHD9-209ENST00000564255 SRBD1Q8N5C6 995 aaKnown RBP2.75□□□□□ -1.97
CHD9-209ENST00000564255 CCDC191Q8NCU4 936 aa2.75□□□□□ -1.97
CHD9-209ENST00000564255 ZFPM2Q8WW38 1151 aa2.75□□□□□ -1.97
CHD9-209ENST00000564255 SNTG1Q9NSN8 517 aa2.75□□□□□ -1.97
CHD9-209ENST00000564255 ABI3Q9P2A4 366 aa2.75□□□□□ -1.97
CHD9-209ENST00000564255 NLKQ9UBE8 527 aa2.75□□□□□ -1.97
CHD9-209ENST00000564255 A4GNTQ9UNA3 340 aa2.75□□□□□ -1.97
CHD9-209ENST00000564255 ARID1BQ8NFD5 2236 aaPredicted RBP2.74□□□□□ -1.97
CHD9-209ENST00000564255 EMSYQ7Z589 1322 aa2.74□□□□□ -1.97
CHD9-209ENST00000564255 ARHGAP10A1A4S6 786 aa2.74□□□□□ -1.97
CHD9-209ENST00000564255 MYO1GB0I1T2 1018 aa2.74□□□□□ -1.97
CHD9-209ENST00000564255 SH2B2O14492 632 aaPredicted RBP2.74□□□□□ -1.97
CHD9-209ENST00000564255 STRNO43815 780 aa2.74□□□□□ -1.97
CHD9-209ENST00000564255 ERAL1O75616 437 aaKnown RBP2.74□□□□□ -1.97
CHD9-209ENST00000564255 ZNF202O95125 648 aa2.74□□□□□ -1.97
CHD9-209ENST00000564255 DDAH2O95865 285 aa2.74□□□□□ -1.97
CHD9-209ENST00000564255 HOXB5P09067 269 aa2.74□□□□□ -1.97
CHD9-209ENST00000564255 FCGR2AP12318 317 aa2.74□□□□□ -1.97
CHD9-209ENST00000564255 AKR1A1P14550 325 aa2.74□□□□□ -1.97
CHD9-209ENST00000564255 SNX16P57768 344 aa2.74□□□□□ -1.97
CHD9-209ENST00000564255 EFEMP1Q12805 493 aa2.74□□□□□ -1.97
CHD9-209ENST00000564255 TAF11Q15544 211 aa2.74□□□□□ -1.97
CHD9-209ENST00000564255 DPCR1Q3MIW9 517 aa2.74□□□□□ -1.97
CHD9-209ENST00000564255 C1QTNF12Q5T7M4 302 aa2.74□□□□□ -1.97
CHD9-209ENST00000564255 SLC30A6Q6NXT4 461 aa2.74□□□□□ -1.97
CHD9-209ENST00000564255 FAM160B2Q86V87 743 aa2.74□□□□□ -1.97
CHD9-209ENST00000564255 TMEM217Q8N7C4 229 aa2.74□□□□□ -1.97
CHD9-209ENST00000564255 FRMD1Q8N878 549 aa2.74□□□□□ -1.97
CHD9-209ENST00000564255 FAM47BQ8NA70 645 aa2.74□□□□□ -1.97
CHD9-209ENST00000564255 ZNF398Q8TD17 642 aa2.74□□□□□ -1.97
CHD9-209ENST00000564255 HS6ST2Q96MM7 605 aa2.74□□□□□ -1.97
CHD9-209ENST00000564255 CMTM3Q96MX0 182 aa2.74□□□□□ -1.97
CHD9-209ENST00000564255 TTC14Q96N46 770 aa2.74□□□□□ -1.97
CHD9-209ENST00000564255 WDFY2Q96P53 400 aa2.74□□□□□ -1.97
CHD9-209ENST00000564255 TIMP4Q99727 224 aa2.74□□□□□ -1.97
CHD9-209ENST00000564255 HEMGNQ9BXL5 484 aa2.74□□□□□ -1.97
CHD9-209ENST00000564255 SLC32A1Q9H598 525 aa2.74□□□□□ -1.97
CHD9-209ENST00000564255 POLR1BQ9H9Y6 1135 aa2.74□□□□□ -1.97
CHD9-209ENST00000564255 FBRSL1Q9HCM7 1045 aaKnown RBP2.74□□□□□ -1.97
CHD9-209ENST00000564255 MLXIPLQ9NP71 852 aa2.74□□□□□ -1.97
CHD9-209ENST00000564255 ENTPD7Q9NQZ7 604 aa2.74□□□□□ -1.97
CHD9-209ENST00000564255 SUCLA2Q9P2R7 463 aaPredicted RBP2.74□□□□□ -1.97
CHD9-209ENST00000564255 ST3GAL5Q9UNP4 418 aa2.74□□□□□ -1.97
CHD9-209ENST00000564255 CDRT15L2A8MXV6 281 aa2.74□□□□□ -1.97
CHD9-209ENST00000564255 POC1B-GALNT4F8VUJ3 575 aa2.74□□□□□ -1.97
CHD9-209ENST00000564255 EXOC3O60645 756 aa2.74□□□□□ -1.97
CHD9-209ENST00000564255 JTBO76095 146 aa2.74□□□□□ -1.97
CHD9-209ENST00000564255 RARRES1P49788 294 aa2.74□□□□□ -1.97
CHD9-209ENST00000564255 SOX10P56693 466 aa2.74□□□□□ -1.97
CHD9-209ENST00000564255 RNPS1Q15287 305 aaKnown RBP2.74□□□□□ -1.97
CHD9-209ENST00000564255 SERTAD4-AS1Q5TG53 156 aa2.74□□□□□ -1.97
CHD9-209ENST00000564255 NAA16Q6N069 864 aaPredicted RBP2.74□□□□□ -1.97
CHD9-209ENST00000564255 TMEM154Q6P9G4 183 aa2.74□□□□□ -1.97
CHD9-209ENST00000564255 RANBP10Q6VN20 620 aa2.74□□□□□ -1.97
CHD9-209ENST00000564255 FAM83HQ6ZRV2 1179 aaPredicted RBP2.74□□□□□ -1.97
CHD9-209ENST00000564255 RASAL3Q86YV0 1011 aa2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms