RNA–Protein interactions for RNA: ENST00000564068.1

COMMD4-209, Transcript of COMM domain containing 4, humanhuman

Gene COMMD4, Length 4,204 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-209ENST00000564068 GALNT18Q6P9A2 607 aa12.78□□□□□ -0.36
COMMD4-209ENST00000564068 XYLT1Q86Y38 959 aa12.78□□□□□ -0.36
COMMD4-209ENST00000564068 SPPL2CQ8IUH8 684 aa12.78□□□□□ -0.36
COMMD4-209ENST00000564068 PSTKQ8IV42 348 aaKnown RBP12.78□□□□□ -0.36
COMMD4-209ENST00000564068 DDX1Q92499 740 aaKnown RBP12.78□□□□□ -0.36
COMMD4-209ENST00000564068 AKT1S1Q96B36 256 aa12.78□□□□□ -0.36
COMMD4-209ENST00000564068 REXO4Q9GZR2 422 aaKnown RBP12.78□□□□□ -0.36
COMMD4-209ENST00000564068 FAM8A1Q9UBU6 413 aa12.78□□□□□ -0.36
COMMD4-209ENST00000564068 RNF112Q9ULX5 631 aa12.78□□□□□ -0.36
COMMD4-209ENST00000564068 GOLGA4Q13439 2230 aaKnown RBP12.78□□□□□ -0.36
COMMD4-209ENST00000564068 RGPD1P0DJD0 1748 aa12.78□□□□□ -0.36
COMMD4-209ENST00000564068 ZNF862O60290 1169 aa12.78□□□□□ -0.36
COMMD4-209ENST00000564068 CABYRO75952 493 aa12.78□□□□□ -0.36
COMMD4-209ENST00000564068 METTL18O95568 372 aa12.78□□□□□ -0.36
COMMD4-209ENST00000564068 ALOX12P18054 663 aa12.78□□□□□ -0.36
COMMD4-209ENST00000564068 LY6KQ17RY6 165 aa12.78□□□□□ -0.36
COMMD4-209ENST00000564068 CRY2Q49AN0 593 aa12.78□□□□□ -0.36
COMMD4-209ENST00000564068 FAM98BQ52LJ0 330 aaKnown RBP12.78□□□□□ -0.36
COMMD4-209ENST00000564068 SLC9A4Q6AI14 798 aa12.78□□□□□ -0.36
COMMD4-209ENST00000564068 C15orf52Q6ZUT6 534 aaKnown RBP12.78□□□□□ -0.36
COMMD4-209ENST00000564068 GATA6Q92908 595 aa12.78□□□□□ -0.36
COMMD4-209ENST00000564068 MFSD3Q96ES6 412 aa12.78□□□□□ -0.36
COMMD4-209ENST00000564068 PPP1R10Q96QC0 940 aaKnown RBP12.78□□□□□ -0.36
COMMD4-209ENST00000564068 ARMC7Q9H6L4 198 aa12.78□□□□□ -0.36
COMMD4-209ENST00000564068 ALG9Q9H6U8 611 aa12.78□□□□□ -0.36
COMMD4-209ENST00000564068 COL20A1Q9P218 1284 aa12.78□□□□□ -0.36
COMMD4-209ENST00000564068 CRYL1Q9Y2S2 319 aa12.78□□□□□ -0.36
COMMD4-209ENST00000564068 TMEM114B3SHH9 223 aa12.77□□□□□ -0.36
COMMD4-209ENST00000564068 ACKR2O00590 384 aa12.77□□□□□ -0.36
COMMD4-209ENST00000564068 TADA2AO75478 443 aa12.77□□□□□ -0.36
COMMD4-209ENST00000564068 PRKAA2P54646 552 aa12.77□□□□□ -0.36
COMMD4-209ENST00000564068 SLC18A2Q05940 514 aa12.77□□□□□ -0.36
COMMD4-209ENST00000564068 BST2Q10589 180 aaKnown RBP12.77□□□□□ -0.36
COMMD4-209ENST00000564068 NAB1Q13506 487 aa12.77□□□□□ -0.36
COMMD4-209ENST00000564068 EEF1DP3Q658K8 133 aa12.77□□□□□ -0.36
COMMD4-209ENST00000564068 SCIMPQ6UWF3 145 aa12.77□□□□□ -0.36
COMMD4-209ENST00000564068 XKR5Q6UX68 686 aa12.77□□□□□ -0.36
COMMD4-209ENST00000564068 SYTL1Q8IYJ3 562 aa12.77□□□□□ -0.36
COMMD4-209ENST00000564068 OR7A2PQ8NGA2 310 aa12.77□□□□□ -0.36
COMMD4-209ENST00000564068 SLC2A14Q8TDB8 520 aa12.77□□□□□ -0.36
COMMD4-209ENST00000564068 MAGED4Q96JG8 741 aa12.77□□□□□ -0.36
COMMD4-209ENST00000564068 PKP2Q99959 881 aa12.77□□□□□ -0.36
COMMD4-209ENST00000564068 CIDEBQ9UHD4 219 aa12.77□□□□□ -0.36
COMMD4-209ENST00000564068 LSM1O15116 133 aaKnown RBP12.77□□□□□ -0.36
COMMD4-209ENST00000564068 LYPLA2O95372 231 aa12.77□□□□□ -0.36
COMMD4-209ENST00000564068 TFPTP0C1Z6 253 aa12.77□□□□□ -0.36
COMMD4-209ENST00000564068 AOC1P19801 751 aa12.77□□□□□ -0.36
COMMD4-209ENST00000564068 ENTPD1P49961 510 aa12.77□□□□□ -0.36
COMMD4-209ENST00000564068 MAP3K7CLP57077 242 aa12.77□□□□□ -0.36
COMMD4-209ENST00000564068 NBPF12Q5TAG4 269 aaPredicted RBP12.77□□□□□ -0.36
COMMD4-209ENST00000564068 PIWIL4Q7Z3Z4 852 aaKnown RBP12.77□□□□□ -0.36
COMMD4-209ENST00000564068 TTC30AQ86WT1 665 aa12.77□□□□□ -0.36
COMMD4-209ENST00000564068 PSMA8Q8TAA3 256 aa12.77□□□□□ -0.36
COMMD4-209ENST00000564068 P2RX7Q99572 595 aaKnown RBP12.77□□□□□ -0.36
COMMD4-209ENST00000564068 ZNF670Q9BS34 389 aa12.77□□□□□ -0.36
COMMD4-209ENST00000564068 TBCDQ9BTW9 1192 aa12.77□□□□□ -0.36
COMMD4-209ENST00000564068 SDCBP2Q9H190 292 aa12.77□□□□□ -0.36
COMMD4-209ENST00000564068 ST6GALNAC4Q9H4F1 302 aa12.77□□□□□ -0.36
COMMD4-209ENST00000564068 MAP3K20Q9NYL2 800 aaKnown RBP12.77□□□□□ -0.36
COMMD4-209ENST00000564068 FZD1Q9UP38 647 aa12.77□□□□□ -0.36
COMMD4-209ENST00000564068 J3QRK9 145 aa12.77□□□□□ -0.37
COMMD4-209ENST00000564068 NRP2O60462 931 aa12.77□□□□□ -0.37
COMMD4-209ENST00000564068 FOXD2O60548 495 aaPredicted RBP12.77□□□□□ -0.37
COMMD4-209ENST00000564068 GEMP55040 296 aa12.77□□□□□ -0.37
COMMD4-209ENST00000564068 HUNKP57058 714 aa12.77□□□□□ -0.37
COMMD4-209ENST00000564068 BROXQ5VW32 411 aa12.77□□□□□ -0.37
COMMD4-209ENST00000564068 IL23RQ5VWK5 629 aa12.77□□□□□ -0.37
COMMD4-209ENST00000564068 HORMAD1Q86X24 394 aa12.77□□□□□ -0.37
COMMD4-209ENST00000564068 RELL1Q8IUW5 271 aa12.77□□□□□ -0.37
COMMD4-209ENST00000564068 APOBEC3FQ8IUX4 373 aaKnown RBP12.77□□□□□ -0.37
COMMD4-209ENST00000564068 OR8H2Q8N162 312 aa12.77□□□□□ -0.37
COMMD4-209ENST00000564068 FBXO30Q8TB52 745 aa12.77□□□□□ -0.37
COMMD4-209ENST00000564068 FBXL8Q96CD0 374 aa12.77□□□□□ -0.37
COMMD4-209ENST00000564068 GPATCH1Q9BRR8 931 aaKnown RBP12.77□□□□□ -0.37
COMMD4-209ENST00000564068 LATS2Q9NRM7 1088 aa12.77□□□□□ -0.37
COMMD4-209ENST00000564068 KCPQ6ZWJ8 1503 aa12.77□□□□□ -0.37
COMMD4-209ENST00000564068 H3BNX3 289 aa12.77□□□□□ -0.37
COMMD4-209ENST00000564068 VWA5AO00534 786 aa12.77□□□□□ -0.37
COMMD4-209ENST00000564068 ZSCAN9O15535 394 aaPredicted RBP12.77□□□□□ -0.37
COMMD4-209ENST00000564068 B4GALT5O43286 388 aa12.77□□□□□ -0.37
COMMD4-209ENST00000564068 ZNF682O95780 498 aa12.77□□□□□ -0.37
COMMD4-209ENST00000564068 NPY2RP49146 381 aa12.77□□□□□ -0.37
COMMD4-209ENST00000564068 NEPROQ6NW34 567 aa12.77□□□□□ -0.37
COMMD4-209ENST00000564068 FAM126BQ8IXS8 530 aa12.77□□□□□ -0.37
COMMD4-209ENST00000564068 AHI1Q8N157 1196 aa12.77□□□□□ -0.37
COMMD4-209ENST00000564068 ELP3Q9H9T3 547 aa12.77□□□□□ -0.37
COMMD4-209ENST00000564068 OLA1Q9NTK5 396 aaKnown RBP12.77□□□□□ -0.37
COMMD4-209ENST00000564068 ERAP1Q9NZ08 941 aa12.77□□□□□ -0.37
COMMD4-209ENST00000564068 PCDHB12Q9Y5F1 795 aa12.77□□□□□ -0.37
COMMD4-209ENST00000564068 SQORQ9Y6N5 450 aa12.77□□□□□ -0.37
COMMD4-209ENST00000564068 TAF4O00268 1085 aa12.76□□□□□ -0.37
COMMD4-209ENST00000564068 MATN2O00339 956 aa12.76□□□□□ -0.37
COMMD4-209ENST00000564068 PGK2P07205 417 aa12.76□□□□□ -0.37
COMMD4-209ENST00000564068 NFKB1P19838 968 aa12.76□□□□□ -0.37
COMMD4-209ENST00000564068 ATP5F1P24539 256 aaPredicted RBP12.76□□□□□ -0.37
COMMD4-209ENST00000564068 TKTL1P51854 596 aa12.76□□□□□ -0.37
COMMD4-209ENST00000564068 ITGA7Q13683 1181 aa12.76□□□□□ -0.37
COMMD4-209ENST00000564068 TATDN1Q6P1N9 297 aa12.76□□□□□ -0.37
COMMD4-209ENST00000564068 SLC22A9Q8IVM8 553 aa12.76□□□□□ -0.37
COMMD4-209ENST00000564068 C8orf59Q8N0T1 100 aaPredicted RBP12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms