RNA–Protein interactions for RNA: ENST00000563854.1

NME3-205, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 5

Gene NME3, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-205ENST00000563854 CA5BQ9Y2D0 317 aa18.06■□□□□ 0.48
NME3-205ENST00000563854 FCF1Q9Y324 198 aaKnown RBP18.06■□□□□ 0.48
NME3-205ENST00000563854 ACTL7AQ9Y615 435 aa18.06■□□□□ 0.48
NME3-205ENST00000563854 AKAP13Q12802 2813 aa18.06■□□□□ 0.48
NME3-205ENST00000563854 ANKRD62A6NC57 917 aa18.05■□□□□ 0.48
NME3-205ENST00000563854 FAM72CH0Y354 149 aa18.05■□□□□ 0.48
NME3-205ENST00000563854 TLR4O00206 839 aa18.05■□□□□ 0.48
NME3-205ENST00000563854 RNF103O00237 685 aa18.05■□□□□ 0.48
NME3-205ENST00000563854 PCDHGA12O60330 932 aa18.05■□□□□ 0.48
NME3-205ENST00000563854 ITGAVP06756 1048 aa18.05■□□□□ 0.48
NME3-205ENST00000563854 PLEKP08567 350 aaPredicted RBP18.05■□□□□ 0.48
NME3-205ENST00000563854 PRLRP16471 622 aa18.05■□□□□ 0.48
NME3-205ENST00000563854 ACVRL1P37023 503 aa18.05■□□□□ 0.48
NME3-205ENST00000563854 NXPH1P58417 271 aa18.05■□□□□ 0.48
NME3-205ENST00000563854 TAS2R38P59533 333 aa18.05■□□□□ 0.48
NME3-205ENST00000563854 ARF5P84085 180 aa18.05■□□□□ 0.48
NME3-205ENST00000563854 SETMARQ53H47 684 aaPredicted RBP18.05■□□□□ 0.48
NME3-205ENST00000563854 FAM72AQ5TYM5 149 aa18.05■□□□□ 0.48
NME3-205ENST00000563854 FAM72DQ6L9T8 149 aa18.05■□□□□ 0.48
NME3-205ENST00000563854 WDR59Q6PJI9 974 aa18.05■□□□□ 0.48
NME3-205ENST00000563854 LEKR1Q6ZMV7 388 aa18.05■□□□□ 0.48
NME3-205ENST00000563854 DBX2Q6ZNG2 339 aa18.05■□□□□ 0.48
NME3-205ENST00000563854 MON1BQ7L1V2 547 aa18.05■□□□□ 0.48
NME3-205ENST00000563854 APTXQ7Z2E3 356 aaKnown RBP18.05■□□□□ 0.48
NME3-205ENST00000563854 TRIM69Q86WT6 500 aa18.05■□□□□ 0.48
NME3-205ENST00000563854 FAM72BQ86X60 149 aa18.05■□□□□ 0.48
NME3-205ENST00000563854 RYBPQ8N488 228 aaPredicted RBP18.05■□□□□ 0.48
NME3-205ENST00000563854 C3orf20Q8ND61 904 aa18.05■□□□□ 0.48
NME3-205ENST00000563854 MCEEQ96PE7 176 aa18.05■□□□□ 0.48
NME3-205ENST00000563854 TM6SF2Q9BZW4 377 aa18.05■□□□□ 0.48
NME3-205ENST00000563854 ZDHHC6Q9H6R6 413 aa18.05■□□□□ 0.48
NME3-205ENST00000563854 PREBQ9HCU5 417 aa18.05■□□□□ 0.48
NME3-205ENST00000563854 NDFIP2Q9NV92 336 aa18.05■□□□□ 0.48
NME3-205ENST00000563854 ARHGAP20Q9P2F6 1191 aa18.05■□□□□ 0.48
NME3-205ENST00000563854 FTSJ1Q9UET6 329 aa18.05■□□□□ 0.48
NME3-205ENST00000563854 DOCK4Q8N1I0 1966 aa18.04■□□□□ 0.48
NME3-205ENST00000563854 A0A1W2PQU0 124 aa18.04■□□□□ 0.48
NME3-205ENST00000563854 TMEM8BA6NDV4 472 aa18.04■□□□□ 0.48
NME3-205ENST00000563854 C10orf142B7Z368 130 aa18.04■□□□□ 0.48
NME3-205ENST00000563854 SLC31A1O15431 190 aa18.04■□□□□ 0.48
NME3-205ENST00000563854 TEX33O43247 280 aa18.04■□□□□ 0.48
NME3-205ENST00000563854 CCP110O43303 1012 aa18.04■□□□□ 0.48
NME3-205ENST00000563854 LEFTY1O75610 366 aa18.04■□□□□ 0.48
NME3-205ENST00000563854 ZMPSTE24O75844 475 aa18.04■□□□□ 0.48
NME3-205ENST00000563854 LRIG2O94898 1065 aa18.04■□□□□ 0.48
NME3-205ENST00000563854 PCDH8O95206 1070 aa18.04■□□□□ 0.48
NME3-205ENST00000563854 FERP16591 822 aa18.04■□□□□ 0.48
NME3-205ENST00000563854 RHOQP17081 205 aa18.04■□□□□ 0.48
NME3-205ENST00000563854 ARRB1P49407 418 aaPredicted RBP18.04■□□□□ 0.48
NME3-205ENST00000563854 CCDC15Q0P6D6 951 aa18.04■□□□□ 0.48
NME3-205ENST00000563854 STAT4Q14765 748 aa18.04■□□□□ 0.48
NME3-205ENST00000563854 MANEALQ5VSG8 457 aa18.04■□□□□ 0.48
NME3-205ENST00000563854 CAVIN1Q6NZI2 390 aaKnown RBP18.04■□□□□ 0.48
NME3-205ENST00000563854 TMIEQ8NEW7 156 aa18.04■□□□□ 0.48
NME3-205ENST00000563854 PPP1R16AQ96I34 528 aa18.04■□□□□ 0.48
NME3-205ENST00000563854 OSBPL2Q9H1P3 480 aa18.04■□□□□ 0.48
NME3-205ENST00000563854 FZD3Q9NPG1 666 aa18.04■□□□□ 0.48
NME3-205ENST00000563854 TOR4AQ9NXH8 423 aa18.04■□□□□ 0.48
NME3-205ENST00000563854 DMTF1Q9Y222 760 aa18.04■□□□□ 0.48
NME3-205ENST00000563854 LRRC10BA6NIK2 292 aa18.03■□□□□ 0.48
NME3-205ENST00000563854 TMCO5BA8MYB1 307 aa18.03■□□□□ 0.48
NME3-205ENST00000563854 TNFSF14O43557 240 aa18.03■□□□□ 0.48
NME3-205ENST00000563854 CCDC172P0C7W6 258 aa18.03■□□□□ 0.48
NME3-205ENST00000563854 ETFBP38117 255 aa18.03■□□□□ 0.48
NME3-205ENST00000563854 MAPKAPK2P49137 400 aa18.03■□□□□ 0.48
NME3-205ENST00000563854 CCNHP51946 323 aaPredicted RBP18.03■□□□□ 0.48
NME3-205ENST00000563854 GSCP56915 257 aaPredicted RBP18.03■□□□□ 0.48
NME3-205ENST00000563854 NRG1Q02297 640 aaPredicted RBP18.03■□□□□ 0.48
NME3-205ENST00000563854 C1QBPQ07021 282 aaKnown RBP18.03■□□□□ 0.48
NME3-205ENST00000563854 SHBQ15464 509 aa18.03■□□□□ 0.48
NME3-205ENST00000563854 CARD16Q5EG05 197 aa18.03■□□□□ 0.48
NME3-205ENST00000563854 EFHC2Q5JST6 749 aa18.03■□□□□ 0.48
NME3-205ENST00000563854 ERN2Q76MJ5 926 aaKnown RBP18.03■□□□□ 0.48
NME3-205ENST00000563854 SLFN11Q7Z7L1 901 aa18.03■□□□□ 0.48
NME3-205ENST00000563854 PYROXD2Q8N2H3 581 aa18.03■□□□□ 0.48
NME3-205ENST00000563854 PCDH20Q8N6Y1 951 aaKnown RBP18.03■□□□□ 0.48
NME3-205ENST00000563854 MFSD2AQ8NA29 543 aa18.03■□□□□ 0.48
NME3-205ENST00000563854 KDF1Q8NAX2 398 aaPredicted RBP18.03■□□□□ 0.48
NME3-205ENST00000563854 OR6K2Q8NGY2 324 aa18.03■□□□□ 0.48
NME3-205ENST00000563854 ARHGEF2Q92974 986 aaKnown RBP18.03■□□□□ 0.48
NME3-205ENST00000563854 CEP44Q9C0F1 390 aa18.03■□□□□ 0.48
NME3-205ENST00000563854 TMEM248Q9NWD8 314 aa18.03■□□□□ 0.48
NME3-205ENST00000563854 HPCAL4Q9UM19 191 aa18.03■□□□□ 0.48
NME3-205ENST00000563854 SIGLEC16A6NMB1 481 aa18.02■□□□□ 0.48
NME3-205ENST00000563854 PRAMEF26H0Y7S4 382 aa18.02■□□□□ 0.48
NME3-205ENST00000563854 CREB3O43889 395 aa18.02■□□□□ 0.48
NME3-205ENST00000563854 RAMP2O60895 175 aa18.02■□□□□ 0.48
NME3-205ENST00000563854 TNFAIP3P21580 790 aa18.02■□□□□ 0.48
NME3-205ENST00000563854 EPHA8P29322 1005 aaPredicted RBP18.02■□□□□ 0.48
NME3-205ENST00000563854 NUDT1P36639 197 aa18.02■□□□□ 0.48
NME3-205ENST00000563854 NEK3P51956 506 aa18.02■□□□□ 0.48
NME3-205ENST00000563854 SLC20A2Q08357 652 aa18.02■□□□□ 0.48
NME3-205ENST00000563854 ACAD10Q6JQN1 1059 aa18.02■□□□□ 0.48
NME3-205ENST00000563854 DCUN1D2Q6PH85 259 aa18.02■□□□□ 0.48
NME3-205ENST00000563854 NLRP14Q86W24 1093 aa18.02■□□□□ 0.48
NME3-205ENST00000563854 SPATS2Q86XZ4 545 aaKnown RBP18.02■□□□□ 0.48
NME3-205ENST00000563854 EID2Q8N6I1 236 aa18.02■□□□□ 0.48
NME3-205ENST00000563854 CENPIQ92674 756 aaPredicted RBP18.02■□□□□ 0.48
NME3-205ENST00000563854 NTAN1Q96AB6 310 aa18.02■□□□□ 0.48
NME3-205ENST00000563854 HEPHQ9BQS7 1158 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms