RNA–Protein interactions for RNA: ENST00000563273.5

NSMCE1-204, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-204ENST00000563273 SLCO1B1Q9Y6L6 691 aa12.48□□□□□ -0.41
NSMCE1-204ENST00000563273 SCINQ9Y6U3 715 aa12.48□□□□□ -0.41
NSMCE1-204ENST00000563273 TMEM191CA6NGB0 347 aa12.47□□□□□ -0.41
NSMCE1-204ENST00000563273 FAM47DPA6NHR8 397 aa12.47□□□□□ -0.41
NSMCE1-204ENST00000563273 GOLGA6L19H0YKK7 550 aa12.47□□□□□ -0.41
NSMCE1-204ENST00000563273 DDX3XO00571 662 aaKnown RBP eCLIP12.47□□□□□ -0.419e-19■■■■□ 20.6
NSMCE1-204ENST00000563273 YKT6O15498 198 aa12.47□□□□□ -0.41
NSMCE1-204ENST00000563273 FGF10O15520 208 aaPredicted RBP12.47□□□□□ -0.41
NSMCE1-204ENST00000563273 FLRT2O43155 660 aa12.47□□□□□ -0.41
NSMCE1-204ENST00000563273 PCDHGA12O60330 932 aa12.47□□□□□ -0.41
NSMCE1-204ENST00000563273 RNGTTO60942 597 aaKnown RBP12.47□□□□□ -0.41
NSMCE1-204ENST00000563273 CBFA2T3O75081 653 aa12.47□□□□□ -0.41
NSMCE1-204ENST00000563273 RTN2O75298 545 aa12.47□□□□□ -0.41
NSMCE1-204ENST00000563273 TRIM16O95361 564 aa12.47□□□□□ -0.41
NSMCE1-204ENST00000563273 CD160O95971 181 aa12.47□□□□□ -0.41
NSMCE1-204ENST00000563273 FTLP02792 175 aaPredicted RBP12.47□□□□□ -0.41
NSMCE1-204ENST00000563273 CTSLP07711 333 aa12.47□□□□□ -0.41
NSMCE1-204ENST00000563273 GLDCP23378 1020 aa12.47□□□□□ -0.41
NSMCE1-204ENST00000563273 NUMBP49757 651 aa12.47□□□□□ -0.41
NSMCE1-204ENST00000563273 ZNF135P52742 658 aaPredicted RBP12.47□□□□□ -0.41
NSMCE1-204ENST00000563273 UBASH3AP57075 661 aa12.47□□□□□ -0.41
NSMCE1-204ENST00000563273 SUZ12Q15022 739 aaKnown RBP12.47□□□□□ -0.41
NSMCE1-204ENST00000563273 ZSCAN23Q3MJ62 389 aa12.47□□□□□ -0.41
NSMCE1-204ENST00000563273 SLC45A4Q5BKX6 768 aa12.47□□□□□ -0.41
NSMCE1-204ENST00000563273 PIP5KL1Q5T9C9 394 aa12.47□□□□□ -0.41
NSMCE1-204ENST00000563273 NAPEPLDQ6IQ20 393 aa12.47□□□□□ -0.41
NSMCE1-204ENST00000563273 LINGO4Q6UY18 593 aa12.47□□□□□ -0.41
NSMCE1-204ENST00000563273 TMC6Q7Z403 805 aa12.47□□□□□ -0.41
NSMCE1-204ENST00000563273 PRPF39Q86UA1 669 aaKnown RBP12.47□□□□□ -0.41
NSMCE1-204ENST00000563273 IQCHQ86VS3 1027 aa12.47□□□□□ -0.41
NSMCE1-204ENST00000563273 ZSCAN30Q86W11 494 aa12.47□□□□□ -0.41
NSMCE1-204ENST00000563273 PSTKQ8IV42 348 aaKnown RBP12.47□□□□□ -0.41
NSMCE1-204ENST00000563273 LRIG1Q96JA1 1093 aa12.47□□□□□ -0.41
NSMCE1-204ENST00000563273 ISCUQ9H1K1 167 aa12.47□□□□□ -0.41
NSMCE1-204ENST00000563273 CATSPERBQ9H7T0 1116 aa12.47□□□□□ -0.41
NSMCE1-204ENST00000563273 EBF2Q9HAK2 575 aa12.47□□□□□ -0.41
NSMCE1-204ENST00000563273 NDFIP2Q9NV92 336 aa12.47□□□□□ -0.41
NSMCE1-204ENST00000563273 ARHGAP20Q9P2F6 1191 aa12.47□□□□□ -0.41
NSMCE1-204ENST00000563273 IL36AQ9UHA7 158 aa12.47□□□□□ -0.41
NSMCE1-204ENST00000563273 FNDC3AQ9Y2H6 1198 aaKnown RBP12.47□□□□□ -0.41
NSMCE1-204ENST00000563273 SNX11Q9Y5W9 270 aa12.47□□□□□ -0.41
NSMCE1-204ENST00000563273 TBC1D3DA0A087WVF3 549 aa12.46□□□□□ -0.41
NSMCE1-204ENST00000563273 TBC1D3IA0A087WXS9 549 aa12.46□□□□□ -0.41
NSMCE1-204ENST00000563273 TBC1D3EA0A087X179 549 aa12.46□□□□□ -0.41
NSMCE1-204ENST00000563273 TBC1D3KA0A087X1G2 549 aa12.46□□□□□ -0.41
NSMCE1-204ENST00000563273 A0A1W2PR77 199 aa12.46□□□□□ -0.41
NSMCE1-204ENST00000563273 TBC1D3FA6NER0 549 aaPredicted RBP12.46□□□□□ -0.41
NSMCE1-204ENST00000563273 TBC1D3LB9A6J9 549 aa12.46□□□□□ -0.41
NSMCE1-204ENST00000563273 KDELR3O43731 214 aa12.46□□□□□ -0.41
NSMCE1-204ENST00000563273 SH3BP5O60239 455 aa12.46□□□□□ -0.41
NSMCE1-204ENST00000563273 MAGEC1O60732 1142 aa12.46□□□□□ -0.41
NSMCE1-204ENST00000563273 GSRP00390 522 aa12.46□□□□□ -0.41
NSMCE1-204ENST00000563273 TBC1D3HP0C7X1 549 aa12.46□□□□□ -0.41
NSMCE1-204ENST00000563273 CD38P28907 300 aa12.46□□□□□ -0.41
NSMCE1-204ENST00000563273 EPHB2P29323 1055 aa12.46□□□□□ -0.41
NSMCE1-204ENST00000563273 ACVRL1P37023 503 aa12.46□□□□□ -0.41
NSMCE1-204ENST00000563273 CCT8P50990 548 aa12.46□□□□□ -0.41
NSMCE1-204ENST00000563273 METAP1P53582 386 aa12.46□□□□□ -0.41
NSMCE1-204ENST00000563273 C21orf59P57076 290 aa12.46□□□□□ -0.41
NSMCE1-204ENST00000563273 TAS2R38P59533 333 aa12.46□□□□□ -0.41
NSMCE1-204ENST00000563273 ZBED6P86452 979 aa12.46□□□□□ -0.41
NSMCE1-204ENST00000563273 OGDHQ02218 1023 aa12.46□□□□□ -0.41
NSMCE1-204ENST00000563273 ACAP1Q15027 740 aa12.46□□□□□ -0.41
NSMCE1-204ENST00000563273 POLD3Q15054 466 aaPredicted RBP12.46□□□□□ -0.41
NSMCE1-204ENST00000563273 PARP15Q460N3 678 aa12.46□□□□□ -0.41
NSMCE1-204ENST00000563273 INO80DQ53TQ3 878 aaPredicted RBP12.46□□□□□ -0.41
NSMCE1-204ENST00000563273 CARD16Q5EG05 197 aa12.46□□□□□ -0.41
NSMCE1-204ENST00000563273 HGSNATQ68CP4 663 aa12.46□□□□□ -0.41
NSMCE1-204ENST00000563273 TBC1D3GQ6DHY5 549 aa12.46□□□□□ -0.41
NSMCE1-204ENST00000563273 TBC1D3CQ6IPX1 549 aa12.46□□□□□ -0.41
NSMCE1-204ENST00000563273 SCYL2Q6P3W7 929 aa12.46□□□□□ -0.41
NSMCE1-204ENST00000563273 DPY19L3Q6ZPD9 716 aa12.46□□□□□ -0.41
NSMCE1-204ENST00000563273 ADAT2Q7Z6V5 191 aaKnown RBP12.46□□□□□ -0.41
NSMCE1-204ENST00000563273 TBC1D3Q8IZP1 549 aaPredicted RBP12.46□□□□□ -0.41
NSMCE1-204ENST00000563273 UMODL1-AS1Q8N2C9 162 aa12.46□□□□□ -0.41
NSMCE1-204ENST00000563273 MFSD2AQ8NA29 543 aa12.46□□□□□ -0.41
NSMCE1-204ENST00000563273 BAHD1Q8TBE0 780 aaPredicted RBP12.46□□□□□ -0.41
NSMCE1-204ENST00000563273 SLC6A18Q96N87 628 aa12.46□□□□□ -0.41
NSMCE1-204ENST00000563273 HEPHQ9BQS7 1158 aa12.46□□□□□ -0.41
NSMCE1-204ENST00000563273 ERVMER34-1Q9H9K5 563 aa12.46□□□□□ -0.41
NSMCE1-204ENST00000563273 MRPL47Q9HD33 250 aaKnown RBP12.46□□□□□ -0.41
NSMCE1-204ENST00000563273 DYRK4Q9NR20 520 aa12.46□□□□□ -0.41
NSMCE1-204ENST00000563273 DNAI1Q9UI46 699 aa12.46□□□□□ -0.41
NSMCE1-204ENST00000563273 PCOLCE2Q9UKZ9 415 aa12.46□□□□□ -0.41
NSMCE1-204ENST00000563273 CAPN11Q9UMQ6 739 aa12.46□□□□□ -0.41
NSMCE1-204ENST00000563273 WASF2Q9Y6W5 498 aa12.46□□□□□ -0.41
NSMCE1-204ENST00000563273 KPNA3O00505 521 aaPredicted RBP12.45□□□□□ -0.42
NSMCE1-204ENST00000563273 AP1G1O43747 822 aa12.45□□□□□ -0.42
NSMCE1-204ENST00000563273 BNIP3LO60238 219 aa12.45□□□□□ -0.42
NSMCE1-204ENST00000563273 LEFTY1O75610 366 aa12.45□□□□□ -0.42
NSMCE1-204ENST00000563273 TPM3P06753 285 aa12.45□□□□□ -0.42
NSMCE1-204ENST00000563273 PSMA2P25787 234 aa12.45□□□□□ -0.42
NSMCE1-204ENST00000563273 ITGB7P26010 798 aa12.45□□□□□ -0.42
NSMCE1-204ENST00000563273 PI4KAP42356 2102 aa12.45□□□□□ -0.42
NSMCE1-204ENST00000563273 CCNHP51946 323 aaPredicted RBP12.45□□□□□ -0.42
NSMCE1-204ENST00000563273 NDST2P52849 883 aa12.45□□□□□ -0.42
NSMCE1-204ENST00000563273 PPP2CBP62714 309 aa12.45□□□□□ -0.42
NSMCE1-204ENST00000563273 PPP2CAP67775 309 aa12.45□□□□□ -0.42
NSMCE1-204ENST00000563273 SIM1P81133 766 aaPredicted RBP12.45□□□□□ -0.42
NSMCE1-204ENST00000563273 TRIP6Q15654 476 aaKnown RBP12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms