RNA–Protein interactions for RNA: ENST00000563235.5

SMG1-207, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,910 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-207ENST00000563235 ARHGAP25P42331 645 aa4.88□□□□□ -1.63
SMG1-207ENST00000563235 INHBCP55103 352 aa4.88□□□□□ -1.63
SMG1-207ENST00000563235 UGP2Q16851 508 aa4.88□□□□□ -1.63
SMG1-207ENST00000563235 KLHL40Q2TBA0 621 aa4.88□□□□□ -1.63
SMG1-207ENST00000563235 KMT5BQ4FZB7 885 aa4.88□□□□□ -1.63
SMG1-207ENST00000563235 PPP6R3Q5H9R7 873 aaPredicted RBP4.88□□□□□ -1.63
SMG1-207ENST00000563235 C9orf152Q5JTZ5 239 aa4.88□□□□□ -1.63
SMG1-207ENST00000563235 MOXD1Q6UVY6 613 aa4.88□□□□□ -1.63
SMG1-207ENST00000563235 KIAA1328Q86T90 577 aa4.88□□□□□ -1.63
SMG1-207ENST00000563235 VPS36Q86VN1 386 aa4.88□□□□□ -1.63
SMG1-207ENST00000563235 MAP7D3Q8IWC1 876 aa4.88□□□□□ -1.63
SMG1-207ENST00000563235 SH2D3CQ8N5H7 860 aa4.88□□□□□ -1.63
SMG1-207ENST00000563235 CMASQ8NFW8 434 aaPredicted RBP4.88□□□□□ -1.63
SMG1-207ENST00000563235 CYP2W1Q8TAV3 490 aa4.88□□□□□ -1.63
SMG1-207ENST00000563235 SLC22A17Q8WUG5 538 aa4.88□□□□□ -1.63
SMG1-207ENST00000563235 ASZ1Q8WWH4 475 aa4.88□□□□□ -1.63
SMG1-207ENST00000563235 DPF2Q92785 391 aa4.88□□□□□ -1.63
SMG1-207ENST00000563235 ANO3Q9BYT9 981 aa4.88□□□□□ -1.63
SMG1-207ENST00000563235 ZNF576Q9H609 170 aa4.88□□□□□ -1.63
SMG1-207ENST00000563235 METTL7AQ9H8H3 244 aa4.88□□□□□ -1.63
SMG1-207ENST00000563235 ZNF395Q9H8N7 513 aaPredicted RBP4.88□□□□□ -1.63
SMG1-207ENST00000563235 CHODLQ9H9P2 273 aa4.88□□□□□ -1.63
SMG1-207ENST00000563235 MRPL40Q9NQ50 206 aaKnown RBP4.88□□□□□ -1.63
SMG1-207ENST00000563235 PKD2L2Q9NZM6 624 aa4.88□□□□□ -1.63
SMG1-207ENST00000563235 CD300AQ9UGN4 299 aa4.88□□□□□ -1.63
SMG1-207ENST00000563235 SEC63Q9UGP8 760 aaKnown RBP4.88□□□□□ -1.63
SMG1-207ENST00000563235 CPA4Q9UI42 421 aa4.88□□□□□ -1.63
SMG1-207ENST00000563235 RABGEF1Q9UJ41 708 aa4.88□□□□□ -1.63
SMG1-207ENST00000563235 GFRA2O00451 464 aa4.87□□□□□ -1.63
SMG1-207ENST00000563235 SPRY1O43609 319 aaPredicted RBP4.87□□□□□ -1.63
SMG1-207ENST00000563235 PRKCBP05771 671 aa4.87□□□□□ -1.63
SMG1-207ENST00000563235 LPLP06858 475 aa4.87□□□□□ -1.63
SMG1-207ENST00000563235 TMEM253P0C7T8 217 aa4.87□□□□□ -1.63
SMG1-207ENST00000563235 EPORP19235 508 aa4.87□□□□□ -1.63
SMG1-207ENST00000563235 NFKBIAP25963 317 aa4.87□□□□□ -1.63
SMG1-207ENST00000563235 PSMA5P28066 241 aa4.87□□□□□ -1.63
SMG1-207ENST00000563235 MAGEA1P43355 309 aa4.87□□□□□ -1.63
SMG1-207ENST00000563235 CDKN1BP46527 198 aa4.87□□□□□ -1.63
SMG1-207ENST00000563235 PHC1P78364 1004 aa4.87□□□□□ -1.63
SMG1-207ENST00000563235 GFPT1Q06210 699 aaPredicted RBP4.87□□□□□ -1.63
SMG1-207ENST00000563235 STIM1Q13586 685 aa4.87□□□□□ -1.63
SMG1-207ENST00000563235 TOB2Q14106 344 aaPredicted RBP4.87□□□□□ -1.63
SMG1-207ENST00000563235 USH1GQ495M9 461 aa4.87□□□□□ -1.63
SMG1-207ENST00000563235 RIPPLY2Q5TAB7 128 aa4.87□□□□□ -1.63
SMG1-207ENST00000563235 PRAMEF20Q5VT98 475 aa4.87□□□□□ -1.63
SMG1-207ENST00000563235 SLC24A5Q71RS6 500 aa4.87□□□□□ -1.63
SMG1-207ENST00000563235 KCTD9Q7L273 389 aa4.87□□□□□ -1.63
SMG1-207ENST00000563235 HDXQ7Z353 690 aa4.87□□□□□ -1.63
SMG1-207ENST00000563235 WDR5BQ86VZ2 330 aa4.87□□□□□ -1.63
SMG1-207ENST00000563235 LRRC6Q86X45 466 aa4.87□□□□□ -1.63
SMG1-207ENST00000563235 CEP57Q86XR8 500 aa4.87□□□□□ -1.63
SMG1-207ENST00000563235 FAM160A2Q8N612 972 aaPredicted RBP4.87□□□□□ -1.63
SMG1-207ENST00000563235 POMGNT2Q8NAT1 580 aa4.87□□□□□ -1.63
SMG1-207ENST00000563235 ROBO4Q8WZ75 1007 aa4.87□□□□□ -1.63
SMG1-207ENST00000563235 TSPAN17Q96FV3 270 aa4.87□□□□□ -1.63
SMG1-207ENST00000563235 ERO1AQ96HE7 468 aa4.87□□□□□ -1.63
SMG1-207ENST00000563235 LINC00615Q96LM1 132 aaPredicted RBP4.87□□□□□ -1.63
SMG1-207ENST00000563235 PRPF18Q99633 342 aaKnown RBP4.87□□□□□ -1.63
SMG1-207ENST00000563235 C1QTNF2Q9BXJ5 285 aa4.87□□□□□ -1.63
SMG1-207ENST00000563235 SHCBP1LQ9BZQ2 653 aa4.87□□□□□ -1.63
SMG1-207ENST00000563235 RMND5AQ9H871 391 aa4.87□□□□□ -1.63
SMG1-207ENST00000563235 ARMCX3Q9UH62 379 aaPredicted RBP4.87□□□□□ -1.63
SMG1-207ENST00000563235 KCND3Q9UK17 655 aa4.87□□□□□ -1.63
SMG1-207ENST00000563235 RWDD3Q9Y3V2 267 aa4.87□□□□□ -1.63
SMG1-207ENST00000563235 NFS1Q9Y697 457 aa4.87□□□□□ -1.63
SMG1-207ENST00000563235 ROCK1Q13464 1354 aa4.87□□□□□ -1.63
SMG1-207ENST00000563235 A0A0A0MRY4 1105 aa4.87□□□□□ -1.63
SMG1-207ENST00000563235 VWA3AA6NCI4 1184 aa4.87□□□□□ -1.63
SMG1-207ENST00000563235 EIF3DO15371 548 aaKnown RBP eCLIP4.87□□□□□ -1.63
SMG1-207ENST00000563235 PRPF4O43172 522 aaKnown RBP eCLIP4.87□□□□□ -1.63
SMG1-207ENST00000563235 RHBDL1O75783 438 aa4.87□□□□□ -1.63
SMG1-207ENST00000563235 AKAP3O75969 853 aa4.87□□□□□ -1.63
SMG1-207ENST00000563235 GDF11O95390 407 aa4.87□□□□□ -1.63
SMG1-207ENST00000563235 ADH1CP00326 375 aa4.87□□□□□ -1.63
SMG1-207ENST00000563235 CYP21A2P08686 494 aa4.87□□□□□ -1.63
SMG1-207ENST00000563235 CYP19A1P11511 503 aaPredicted RBP4.87□□□□□ -1.63
SMG1-207ENST00000563235 PRPS2P11908 318 aa4.87□□□□□ -1.63
SMG1-207ENST00000563235 CFL1P23528 166 aaKnown RBP4.87□□□□□ -1.63
SMG1-207ENST00000563235 SREBF1P36956 1147 aa4.87□□□□□ -1.63
SMG1-207ENST00000563235 GATA4P43694 442 aa4.87□□□□□ -1.63
SMG1-207ENST00000563235 ACADSBP45954 432 aa4.87□□□□□ -1.63
SMG1-207ENST00000563235 HDGFP51858 240 aaKnown RBP4.87□□□□□ -1.63
SMG1-207ENST00000563235 TSTA3Q13630 321 aaPredicted RBP4.87□□□□□ -1.63
SMG1-207ENST00000563235 INPP5AQ14642 412 aa4.87□□□□□ -1.63
SMG1-207ENST00000563235 RPS6KA1Q15418 735 aa4.87□□□□□ -1.63
SMG1-207ENST00000563235 FSCN1Q16658 493 aaKnown RBP4.87□□□□□ -1.63
SMG1-207ENST00000563235 EXOSC6Q5RKV6 272 aaKnown RBP4.87□□□□□ -1.63
SMG1-207ENST00000563235 BEND6Q5SZJ8 279 aaPredicted RBP4.87□□□□□ -1.63
SMG1-207ENST00000563235 SULT1C3Q6IMI6 304 aa4.87□□□□□ -1.63
SMG1-207ENST00000563235 SCYL2Q6P3W7 929 aa4.87□□□□□ -1.63
SMG1-207ENST00000563235 AFTPHQ6ULP2 937 aa4.87□□□□□ -1.63
SMG1-207ENST00000563235 MACC1Q6ZN28 852 aa4.87□□□□□ -1.63
SMG1-207ENST00000563235 UNC13DQ70J99 1090 aa4.87□□□□□ -1.63
SMG1-207ENST00000563235 CCDC117Q8IWD4 279 aaPredicted RBP4.87□□□□□ -1.63
SMG1-207ENST00000563235 OFCC1Q8IZS5 231 aa4.87□□□□□ -1.63
SMG1-207ENST00000563235 MINDY1Q8N5J2 469 aa4.87□□□□□ -1.63
SMG1-207ENST00000563235 HMCESQ96FZ2 354 aa4.87□□□□□ -1.63
SMG1-207ENST00000563235 KCNK16Q96T55 309 aa4.87□□□□□ -1.63
SMG1-207ENST00000563235 PHF7Q9BWX1 381 aaPredicted RBP4.87□□□□□ -1.63
SMG1-207ENST00000563235 PITHD1Q9GZP4 211 aaPredicted RBP4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms