RNA–Protein interactions for RNA: ENST00000563218.5

SPG7-207, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 5

Gene SPG7, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-207ENST00000563218 PACSIN1Q9BY11 444 aa13.73□□□□□ -0.21
SPG7-207ENST00000563218 ISCUQ9H1K1 167 aa13.73□□□□□ -0.21
SPG7-207ENST00000563218 KIAA1257Q9ULG3 409 aa13.73□□□□□ -0.21
SPG7-207ENST00000563218 SCML1Q9UN30 329 aa13.73□□□□□ -0.21
SPG7-207ENST00000563218 TLR6Q9Y2C9 796 aa13.73□□□□□ -0.21
SPG7-207ENST00000563218 KIF26BQ2KJY2 2108 aa13.73□□□□□ -0.21
SPG7-207ENST00000563218 EDDM13A0A1B0GTR0 161 aa13.72□□□□□ -0.21
SPG7-207ENST00000563218 MACROD2A1Z1Q3 448 aa13.72□□□□□ -0.21
SPG7-207ENST00000563218 ANKRD62A6NC57 917 aa13.72□□□□□ -0.21
SPG7-207ENST00000563218 LRRC72A6NJI9 287 aa13.72□□□□□ -0.21
SPG7-207ENST00000563218 BTNL10A8MVZ5 291 aa13.72□□□□□ -0.21
SPG7-207ENST00000563218 RNASEH1O60930 286 aaKnown RBP13.72□□□□□ -0.21
SPG7-207ENST00000563218 RFPL3O75679 317 aa13.72□□□□□ -0.21
SPG7-207ENST00000563218 LDOC1O95751 146 aaPredicted RBP13.72□□□□□ -0.21
SPG7-207ENST00000563218 FTLP02792 175 aaPredicted RBP13.72□□□□□ -0.21
SPG7-207ENST00000563218 ITGAVP06756 1048 aa13.72□□□□□ -0.21
SPG7-207ENST00000563218 TMEM253P0C7T8 217 aa13.72□□□□□ -0.21
SPG7-207ENST00000563218 ABCB4P21439 1286 aa13.72□□□□□ -0.21
SPG7-207ENST00000563218 TACR2P21452 398 aa13.72□□□□□ -0.21
SPG7-207ENST00000563218 MZF1P28698 734 aaPredicted RBP13.72□□□□□ -0.21
SPG7-207ENST00000563218 IRAK1P51617 712 aa13.72□□□□□ -0.21
SPG7-207ENST00000563218 NAP1L1P55209 391 aaKnown RBP13.72□□□□□ -0.21
SPG7-207ENST00000563218 ECT2LQ008S8 904 aa13.72□□□□□ -0.21
SPG7-207ENST00000563218 TAF5Q15542 800 aa13.72□□□□□ -0.21
SPG7-207ENST00000563218 ZC3H12AQ5D1E8 599 aaKnown RBP13.72□□□□□ -0.21
SPG7-207ENST00000563218 HES3Q5TGS1 186 aa13.72□□□□□ -0.21
SPG7-207ENST00000563218 ACAD10Q6JQN1 1059 aa13.72□□□□□ -0.21
SPG7-207ENST00000563218 SND1Q7KZF4 910 aaKnown RBP eCLIP13.72□□□□□ -0.21
SPG7-207ENST00000563218 KANSL1Q7Z3B3 1105 aa13.72□□□□□ -0.21
SPG7-207ENST00000563218 CHSY1Q86X52 802 aa13.72□□□□□ -0.21
SPG7-207ENST00000563218 SPATS2Q86XZ4 545 aaKnown RBP13.72□□□□□ -0.21
SPG7-207ENST00000563218 RNF10Q8N5U6 811 aaKnown RBP13.72□□□□□ -0.21
SPG7-207ENST00000563218 KIF18AQ8NI77 898 aa13.72□□□□□ -0.21
SPG7-207ENST00000563218 SERAC1Q96JX3 654 aa13.72□□□□□ -0.21
SPG7-207ENST00000563218 HSFY1Q96LI6 401 aa13.72□□□□□ -0.21
SPG7-207ENST00000563218 ST7Q9NRC1 585 aa13.72□□□□□ -0.21
SPG7-207ENST00000563218 TAS2R14Q9NYV8 317 aa13.72□□□□□ -0.21
SPG7-207ENST00000563218 DNAI1Q9UI46 699 aa13.72□□□□□ -0.21
SPG7-207ENST00000563218 FZD4Q9ULV1 537 aa13.72□□□□□ -0.21
SPG7-207ENST00000563218 CA5BQ9Y2D0 317 aa13.72□□□□□ -0.21
SPG7-207ENST00000563218 CEP83Q9Y592 693 aa13.72□□□□□ -0.21
SPG7-207ENST00000563218 PAXBP1Q9Y5B6 917 aa13.72□□□□□ -0.21
SPG7-207ENST00000563218 DUSP10Q9Y6W6 482 aa13.72□□□□□ -0.21
SPG7-207ENST00000563218 LRRK1Q38SD2 2015 aa13.71□□□□□ -0.21
SPG7-207ENST00000563218 CHD5Q8TDI0 1954 aa13.71□□□□□ -0.21
SPG7-207ENST00000563218 A0A0A6YYK5 440 aaPredicted RBP13.71□□□□□ -0.21
SPG7-207ENST00000563218 TARSL2A2RTX5 802 aaKnown RBP13.71□□□□□ -0.21
SPG7-207ENST00000563218 TYW5A2RUC4 315 aaKnown RBP13.71□□□□□ -0.21
SPG7-207ENST00000563218 FBXO21O94952 628 aa13.71□□□□□ -0.21
SPG7-207ENST00000563218 IL1BP01584 269 aa13.71□□□□□ -0.21
SPG7-207ENST00000563218 IGLV3-25P01717 112 aa13.71□□□□□ -0.21
SPG7-207ENST00000563218 CYP1A1P04798 512 aaPredicted RBP13.71□□□□□ -0.21
SPG7-207ENST00000563218 SRPRAP08240 638 aaKnown RBP13.71□□□□□ -0.21
SPG7-207ENST00000563218 PDGFRAP16234 1089 aa13.71□□□□□ -0.21
SPG7-207ENST00000563218 GOT1P17174 413 aa13.71□□□□□ -0.21
SPG7-207ENST00000563218 MAT2AP31153 395 aaKnown RBP13.71□□□□□ -0.21
SPG7-207ENST00000563218 CASQ1P31415 396 aa13.71□□□□□ -0.21
SPG7-207ENST00000563218 GPD2P43304 727 aa13.71□□□□□ -0.21
SPG7-207ENST00000563218 ABCG1P45844 678 aa13.71□□□□□ -0.21
SPG7-207ENST00000563218 NSFP46459 744 aaKnown RBP13.71□□□□□ -0.21
SPG7-207ENST00000563218 RPL34P49207 117 aaKnown RBP13.71□□□□□ -0.21
SPG7-207ENST00000563218 CCR5P51681 352 aa13.71□□□□□ -0.21
SPG7-207ENST00000563218 NXPH1P58417 271 aa13.71□□□□□ -0.21
SPG7-207ENST00000563218 IFI16Q16666 785 aaKnown RBP13.71□□□□□ -0.21
SPG7-207ENST00000563218 INAVAQ3KP66 663 aa13.71□□□□□ -0.21
SPG7-207ENST00000563218 POM121L1PQ3SYA9 428 aa13.71□□□□□ -0.21
SPG7-207ENST00000563218 NAA35Q5VZE5 725 aa13.71□□□□□ -0.21
SPG7-207ENST00000563218 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.71□□□□□ -0.21
SPG7-207ENST00000563218 TMPRSS12Q86WS5 348 aa13.71□□□□□ -0.21
SPG7-207ENST00000563218 DNAAF5Q86Y56 855 aa13.71□□□□□ -0.21
SPG7-207ENST00000563218 PASD1Q8IV76 773 aa13.71□□□□□ -0.21
SPG7-207ENST00000563218 SLC35F6Q8N357 371 aa13.71□□□□□ -0.21
SPG7-207ENST00000563218 OR52K2Q8NGK3 314 aa13.71□□□□□ -0.21
SPG7-207ENST00000563218 TRIM11Q96F44 468 aa13.71□□□□□ -0.21
SPG7-207ENST00000563218 NOX5Q96PH1 765 aa13.71□□□□□ -0.21
SPG7-207ENST00000563218 ALS2CR12Q96Q35 445 aa13.71□□□□□ -0.21
SPG7-207ENST00000563218 IRX2Q9BZI1 471 aaPredicted RBP13.71□□□□□ -0.21
SPG7-207ENST00000563218 SARDHQ9UL12 918 aa13.71□□□□□ -0.21
SPG7-207ENST00000563218 PCDHGC3Q9UN70 934 aa13.71□□□□□ -0.21
SPG7-207ENST00000563218 E5RJQ4 531 aa13.7□□□□□ -0.22
SPG7-207ENST00000563218 SDC3O75056 442 aa13.7□□□□□ -0.22
SPG7-207ENST00000563218 C1QL1O75973 258 aa13.7□□□□□ -0.22
SPG7-207ENST00000563218 MOCS3O95396 460 aa13.7□□□□□ -0.22
SPG7-207ENST00000563218 LSM8O95777 96 aaKnown RBP13.7□□□□□ -0.22
SPG7-207ENST00000563218 ADH1BP00325 375 aa13.7□□□□□ -0.22
SPG7-207ENST00000563218 UNGP13051 313 aaPredicted RBP13.7□□□□□ -0.22
SPG7-207ENST00000563218 JUPP14923 745 aa13.7□□□□□ -0.22
SPG7-207ENST00000563218 GGCXP38435 758 aa13.7□□□□□ -0.22
SPG7-207ENST00000563218 NOP2P46087 812 aaKnown RBP13.7□□□□□ -0.22
SPG7-207ENST00000563218 NOMO3P69849 1222 aa13.7□□□□□ -0.22
SPG7-207ENST00000563218 SEMG2Q02383 582 aa13.7□□□□□ -0.22
SPG7-207ENST00000563218 CENPCQ03188 943 aa13.7□□□□□ -0.22
SPG7-207ENST00000563218 TARDBPQ13148 414 aaKnown RBP eCLIP13.7□□□□□ -0.22
SPG7-207ENST00000563218 NNTQ13423 1086 aa13.7□□□□□ -0.22
SPG7-207ENST00000563218 STILQ15468 1287 aa13.7□□□□□ -0.22
SPG7-207ENST00000563218 CXorf57Q6NSI4 855 aaKnown RBP13.7□□□□□ -0.22
SPG7-207ENST00000563218 FBXL19Q6PCT2 694 aa13.7□□□□□ -0.22
SPG7-207ENST00000563218 ZNF557Q8N988 423 aaPredicted RBP13.7□□□□□ -0.22
SPG7-207ENST00000563218 KDM1BQ8NB78 822 aa13.7□□□□□ -0.22
SPG7-207ENST00000563218 TMEM35BQ8NCS4 154 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms