RNA–Protein interactions for RNA: ENST00000563130.5

CNOT1-204, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 2,280 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-204ENST00000563130 SLC1A1P43005 524 aa6.32□□□□□ -1.4
CNOT1-204ENST00000563130 GSDMDP57764 484 aa6.32□□□□□ -1.4
CNOT1-204ENST00000563130 SLC20A2Q08357 652 aa6.32□□□□□ -1.4
CNOT1-204ENST00000563130 POLD3Q15054 466 aaPredicted RBP6.32□□□□□ -1.4
CNOT1-204ENST00000563130 HADHQ16836 314 aaKnown RBP6.32□□□□□ -1.4
CNOT1-204ENST00000563130 PARP15Q460N3 678 aa6.32□□□□□ -1.4
CNOT1-204ENST00000563130 ATP13A4Q4VNC1 1196 aa6.32□□□□□ -1.4
CNOT1-204ENST00000563130 USP39Q53GS9 565 aaKnown RBP6.32□□□□□ -1.4
CNOT1-204ENST00000563130 PPP6R3Q5H9R7 873 aaPredicted RBP6.32□□□□□ -1.4
CNOT1-204ENST00000563130 RETSATQ6NUM9 610 aa6.32□□□□□ -1.4
CNOT1-204ENST00000563130 NPWQ8N729 165 aa6.32□□□□□ -1.4
CNOT1-204ENST00000563130 NKD2Q969F2 451 aaPredicted RBP6.32□□□□□ -1.4
CNOT1-204ENST00000563130 CSPG4P5Q96PW8 444 aa6.32□□□□□ -1.4
CNOT1-204ENST00000563130 FAM129BQ96TA1 746 aa6.32□□□□□ -1.4
CNOT1-204ENST00000563130 LACRTQ9GZZ8 138 aa6.32□□□□□ -1.4
CNOT1-204ENST00000563130 SLC6A17Q9H1V8 727 aa6.32□□□□□ -1.4
CNOT1-204ENST00000563130 ZWILCHQ9H900 591 aa6.32□□□□□ -1.4
CNOT1-204ENST00000563130 PRDM16Q9HAZ2 1276 aa6.32□□□□□ -1.4
CNOT1-204ENST00000563130 PCDH18Q9HCL0 1135 aa6.32□□□□□ -1.4
CNOT1-204ENST00000563130 ATP13A1Q9HD20 1204 aa6.32□□□□□ -1.4
CNOT1-204ENST00000563130 LUC7LQ9NQ29 371 aaKnown RBP6.32□□□□□ -1.4
CNOT1-204ENST00000563130 ITM2CQ9NQX7 267 aa6.32□□□□□ -1.4
CNOT1-204ENST00000563130 STAU2Q9NUL3 570 aaKnown RBP eCLIP6.32□□□□□ -1.4
CNOT1-204ENST00000563130 DONSONQ9NYP3 566 aa6.32□□□□□ -1.4
CNOT1-204ENST00000563130 USP36Q9P275 1121 aaKnown RBP6.32□□□□□ -1.4
CNOT1-204ENST00000563130 RCOR3Q9P2K3 495 aaPredicted RBP6.32□□□□□ -1.4
CNOT1-204ENST00000563130 SLC25A13Q9UJS0 675 aa6.32□□□□□ -1.4
CNOT1-204ENST00000563130 PRR23AA6NEV1 266 aa6.32□□□□□ -1.4
CNOT1-204ENST00000563130 RASA4BC9J798 803 aa6.32□□□□□ -1.4
CNOT1-204ENST00000563130 K7ERQ8 282 aa6.32□□□□□ -1.4
CNOT1-204ENST00000563130 CBX4O00257 560 aa6.32□□□□□ -1.4
CNOT1-204ENST00000563130 MCF2LO15068 1137 aa6.32□□□□□ -1.4
CNOT1-204ENST00000563130 DCLK1O15075 740 aa6.32□□□□□ -1.4
CNOT1-204ENST00000563130 RASA4O43374 803 aa6.32□□□□□ -1.4
CNOT1-204ENST00000563130 SMAD6O43541 496 aaKnown RBP6.32□□□□□ -1.4
CNOT1-204ENST00000563130 KDELR3O43731 214 aa6.32□□□□□ -1.4
CNOT1-204ENST00000563130 BUB1BO60566 1050 aaPredicted RBP6.32□□□□□ -1.4
CNOT1-204ENST00000563130 LMNAP02545 664 aaKnown RBP6.32□□□□□ -1.4
CNOT1-204ENST00000563130 KRT7P08729 469 aa6.32□□□□□ -1.4
CNOT1-204ENST00000563130 CD48P09326 243 aa6.32□□□□□ -1.4
CNOT1-204ENST00000563130 VAV1P15498 845 aa6.32□□□□□ -1.4
CNOT1-204ENST00000563130 SERPINH1P50454 418 aaKnown RBP6.32□□□□□ -1.4
CNOT1-204ENST00000563130 VAV2P52735 878 aa6.32□□□□□ -1.4
CNOT1-204ENST00000563130 NDST2P52849 883 aa6.32□□□□□ -1.4
CNOT1-204ENST00000563130 ZBTB16Q05516 673 aa6.32□□□□□ -1.4
CNOT1-204ENST00000563130 SERINC3Q13530 473 aa6.32□□□□□ -1.4
CNOT1-204ENST00000563130 SIM2Q14190 667 aaPredicted RBP6.32□□□□□ -1.4
CNOT1-204ENST00000563130 ELAVL3Q14576 367 aaKnown RBP6.32□□□□□ -1.4
CNOT1-204ENST00000563130 MESDQ14696 234 aa6.32□□□□□ -1.4
CNOT1-204ENST00000563130 DLG2Q15700 870 aa6.32□□□□□ -1.4
CNOT1-204ENST00000563130 PLK5Q496M5 336 aa6.32□□□□□ -1.4
CNOT1-204ENST00000563130 LRRC38Q5VT99 294 aa6.32□□□□□ -1.4
CNOT1-204ENST00000563130 LINGO4Q6UY18 593 aa6.32□□□□□ -1.4
CNOT1-204ENST00000563130 ASCL5Q7RTU5 278 aa6.32□□□□□ -1.4
CNOT1-204ENST00000563130 ARHGAP12Q8IWW6 846 aa6.32□□□□□ -1.4
CNOT1-204ENST00000563130 FRMD1Q8N878 549 aa6.32□□□□□ -1.4
CNOT1-204ENST00000563130 ACRBPQ8NEB7 543 aa6.32□□□□□ -1.4
CNOT1-204ENST00000563130 RLN3Q8WXF3 142 aa6.32□□□□□ -1.4
CNOT1-204ENST00000563130 HSPH1Q92598 858 aa6.32□□□□□ -1.4
CNOT1-204ENST00000563130 PRCCQ92733 491 aaPredicted RBP6.32□□□□□ -1.4
CNOT1-204ENST00000563130 VOPP1Q96AW1 172 aa6.32□□□□□ -1.4
CNOT1-204ENST00000563130 FAF2Q96CS3 445 aa6.32□□□□□ -1.4
CNOT1-204ENST00000563130 ERLEC1Q96DZ1 483 aa6.32□□□□□ -1.4
CNOT1-204ENST00000563130 SIPA1Q96FS4 1042 aa6.32□□□□□ -1.4
CNOT1-204ENST00000563130 SPON2Q9BUD6 331 aa6.32□□□□□ -1.4
CNOT1-204ENST00000563130 DUSP15Q9H1R2 295 aaPredicted RBP6.32□□□□□ -1.4
CNOT1-204ENST00000563130 CD93Q9NPY3 652 aa6.32□□□□□ -1.4
CNOT1-204ENST00000563130 BCCIPQ9P287 314 aaKnown RBP eCLIP6.32□□□□□ -1.4
CNOT1-204ENST00000563130 MBD1Q9UIS9 605 aaPredicted RBP6.32□□□□□ -1.4
CNOT1-204ENST00000563130 PLXND1Q9Y4D7 1925 aa6.31□□□□□ -1.4
CNOT1-204ENST00000563130 IGHV1OR15-9A0A0B4J2B8 117 aa6.31□□□□□ -1.4
CNOT1-204ENST00000563130 GOLGA6L3A6NEY3 463 aa6.31□□□□□ -1.4
CNOT1-204ENST00000563130 ZSCAN5CA6NGD5 496 aaPredicted RBP6.31□□□□□ -1.4
CNOT1-204ENST00000563130 GOLGA6L6A8MZA4 724 aa6.31□□□□□ -1.4
CNOT1-204ENST00000563130 C10orf142B7Z368 130 aa6.31□□□□□ -1.4
CNOT1-204ENST00000563130 H3BRJ5 948 aa6.31□□□□□ -1.4
CNOT1-204ENST00000563130 IPO7O95373 1038 aaKnown RBP6.31□□□□□ -1.4
CNOT1-204ENST00000563130 BCKDHBP21953 392 aa6.31□□□□□ -1.4
CNOT1-204ENST00000563130 ARL4AP40617 200 aa6.31□□□□□ -1.4
CNOT1-204ENST00000563130 TPMTP51580 245 aa6.31□□□□□ -1.4
CNOT1-204ENST00000563130 CDH6P55285 790 aa6.31□□□□□ -1.4
CNOT1-204ENST00000563130 RPS14P62263 151 aaKnown RBP6.31□□□□□ -1.4
CNOT1-204ENST00000563130 DHX9Q08211 1270 aaKnown RBP6.31□□□□□ -1.4
CNOT1-204ENST00000563130 DPYSL3Q14195 570 aa6.31□□□□□ -1.4
CNOT1-204ENST00000563130 PDK2Q15119 407 aa6.31□□□□□ -1.4
CNOT1-204ENST00000563130 INO80DQ53TQ3 878 aaPredicted RBP6.31□□□□□ -1.4
CNOT1-204ENST00000563130 SPDYCQ5MJ68 293 aa6.31□□□□□ -1.4
CNOT1-204ENST00000563130 PMS2CLQ68D20 193 aa6.31□□□□□ -1.4
CNOT1-204ENST00000563130 IL31Q6EBC2 164 aa6.31□□□□□ -1.4
CNOT1-204ENST00000563130 KBTBD6Q86V97 674 aa6.31□□□□□ -1.4
CNOT1-204ENST00000563130 C11orf74Q86VG3 221 aa6.31□□□□□ -1.4
CNOT1-204ENST00000563130 VSIG1Q86XK7 387 aa6.31□□□□□ -1.4
CNOT1-204ENST00000563130 CCDC116Q8IYX3 515 aa6.31□□□□□ -1.4
CNOT1-204ENST00000563130 PGBD3Q8N328 593 aa6.31□□□□□ -1.4
CNOT1-204ENST00000563130 LZTR1Q8N653 840 aa6.31□□□□□ -1.4
CNOT1-204ENST00000563130 OR2A12Q8NGT7 310 aa6.31□□□□□ -1.4
CNOT1-204ENST00000563130 FAM131CQ96AQ9 280 aa6.31□□□□□ -1.4
CNOT1-204ENST00000563130 ISG20Q96AZ6 181 aaKnown RBP6.31□□□□□ -1.4
CNOT1-204ENST00000563130 FAM122AQ96E09 287 aa6.31□□□□□ -1.4
CNOT1-204ENST00000563130 HMCESQ96FZ2 354 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms