RNA–Protein interactions for RNA: ENST00000562707.5

CMTM3-205, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CMTM3, Length 714 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-205ENST00000562707 PCDHB1Q9Y5F3 818 aa16.96■□□□□ 0.31
CMTM3-205ENST00000562707 HS3ST3A1Q9Y663 406 aa16.96■□□□□ 0.31
CMTM3-205ENST00000562707 CAPN8A6NHC0 703 aa16.95■□□□□ 0.3
CMTM3-205ENST00000562707 A6NNZ2 444 aa16.95■□□□□ 0.3
CMTM3-205ENST00000562707 SCAMP1O15126 338 aa16.95■□□□□ 0.3
CMTM3-205ENST00000562707 SMAD6O43541 496 aaKnown RBP16.95■□□□□ 0.3
CMTM3-205ENST00000562707 ADCY5O95622 1261 aa16.95■□□□□ 0.3
CMTM3-205ENST00000562707 F9P00740 461 aa16.95■□□□□ 0.3
CMTM3-205ENST00000562707 MPOP05164 745 aa16.95■□□□□ 0.3
CMTM3-205ENST00000562707 GP1BAP07359 652 aa16.95■□□□□ 0.3
CMTM3-205ENST00000562707 CXCR3P49682 368 aa16.95■□□□□ 0.3
CMTM3-205ENST00000562707 RNASE9P60153 205 aaKnown RBP16.95■□□□□ 0.3
CMTM3-205ENST00000562707 HNRNPKP61978 463 aaKnown RBP eCLIP16.95■□□□□ 0.3
CMTM3-205ENST00000562707 MAPK8IP2Q13387 824 aaPredicted RBP16.95■□□□□ 0.3
CMTM3-205ENST00000562707 EXOC3L4Q17RC7 722 aa16.95■□□□□ 0.3
CMTM3-205ENST00000562707 ALFQ53S48 1182 aa16.95■□□□□ 0.3
CMTM3-205ENST00000562707 ACBD5Q5T8D3 534 aaPredicted RBP16.95■□□□□ 0.3
CMTM3-205ENST00000562707 CDCP2Q5VXM1 449 aa16.95■□□□□ 0.3
CMTM3-205ENST00000562707 SEL1L3Q68CR1 1132 aa16.95■□□□□ 0.3
CMTM3-205ENST00000562707 LINGO4Q6UY18 593 aa16.95■□□□□ 0.3
CMTM3-205ENST00000562707 GCNT7Q6ZNI0 430 aa16.95■□□□□ 0.3
CMTM3-205ENST00000562707 CHST14Q8NCH0 376 aa16.95■□□□□ 0.3
CMTM3-205ENST00000562707 ZNF397Q8NF99 534 aaPredicted RBP16.95■□□□□ 0.3
CMTM3-205ENST00000562707 GRIN3AQ8TCU5 1115 aa16.95■□□□□ 0.3
CMTM3-205ENST00000562707 NAF1Q96HR8 494 aaKnown RBP16.95■□□□□ 0.3
CMTM3-205ENST00000562707 FEM1CQ96JP0 617 aa16.95■□□□□ 0.3
CMTM3-205ENST00000562707 NPY6RQ99463 290 aa16.95■□□□□ 0.3
CMTM3-205ENST00000562707 OSBPL2Q9H1P3 480 aa16.95■□□□□ 0.3
CMTM3-205ENST00000562707 TNKS2Q9H2K2 1166 aa16.95■□□□□ 0.3
CMTM3-205ENST00000562707 PIGVQ9NUD9 493 aa16.95■□□□□ 0.3
CMTM3-205ENST00000562707 IPO11Q9UI26 975 aaKnown RBP16.95■□□□□ 0.3
CMTM3-205ENST00000562707 A0A0D9SEW6 157 aa16.94■□□□□ 0.3
CMTM3-205ENST00000562707 DRGXA6NNA5 263 aa16.94■□□□□ 0.3
CMTM3-205ENST00000562707 USP12O75317 370 aa16.94■□□□□ 0.3
CMTM3-205ENST00000562707 GIMD1P0DJR0 217 aa16.94■□□□□ 0.3
CMTM3-205ENST00000562707 OR1E1P30953 314 aa16.94■□□□□ 0.3
CMTM3-205ENST00000562707 SULT1E1P49888 294 aa16.94■□□□□ 0.3
CMTM3-205ENST00000562707 NEK3P51956 506 aa16.94■□□□□ 0.3
CMTM3-205ENST00000562707 UCNP55089 124 aa16.94■□□□□ 0.3
CMTM3-205ENST00000562707 RPS21P63220 83 aaKnown RBP16.94■□□□□ 0.3
CMTM3-205ENST00000562707 GABREP78334 506 aa16.94■□□□□ 0.3
CMTM3-205ENST00000562707 DEUP1Q05D60 604 aa16.94■□□□□ 0.3
CMTM3-205ENST00000562707 SLC20A2Q08357 652 aa16.94■□□□□ 0.3
CMTM3-205ENST00000562707 PTPN20Q4JDL3 420 aa16.94■□□□□ 0.3
CMTM3-205ENST00000562707 TAF1BQ53T94 588 aaPredicted RBP16.94■□□□□ 0.3
CMTM3-205ENST00000562707 ZNF542PQ5EBM4 170 aa16.94■□□□□ 0.3
CMTM3-205ENST00000562707 RETSATQ6NUM9 610 aa16.94■□□□□ 0.3
CMTM3-205ENST00000562707 C22orf39Q6P5X5 142 aa16.94■□□□□ 0.3
CMTM3-205ENST00000562707 PTAR1Q7Z6K3 402 aaPredicted RBP16.94■□□□□ 0.3
CMTM3-205ENST00000562707 TFAP2DQ7Z6R9 452 aa16.94■□□□□ 0.3
CMTM3-205ENST00000562707 ZNF843Q8N446 348 aa16.94■□□□□ 0.3
CMTM3-205ENST00000562707 FAM181AQ8N9Y4 354 aa16.94■□□□□ 0.3
CMTM3-205ENST00000562707 C1orf74Q96LT6 269 aa16.94■□□□□ 0.3
CMTM3-205ENST00000562707 SPON2Q9BUD6 331 aa16.94■□□□□ 0.3
CMTM3-205ENST00000562707 SLC17A9Q9BYT1 436 aa16.94■□□□□ 0.3
CMTM3-205ENST00000562707 PDCL3Q9H2J4 239 aa16.94■□□□□ 0.3
CMTM3-205ENST00000562707 SNX10Q9Y5X0 201 aa16.94■□□□□ 0.3
CMTM3-205ENST00000562707 H3BM21 787 aa16.93■□□□□ 0.3
CMTM3-205ENST00000562707 K7ESM1 405 aa16.93■□□□□ 0.3
CMTM3-205ENST00000562707 CSO75390 466 aaKnown RBP16.93■□□□□ 0.3
CMTM3-205ENST00000562707 LEFTY1O75610 366 aa16.93■□□□□ 0.3
CMTM3-205ENST00000562707 ENDOD1O94919 500 aa16.93■□□□□ 0.3
CMTM3-205ENST00000562707 PAK4O96013 591 aaPredicted RBP16.93■□□□□ 0.3
CMTM3-205ENST00000562707 MYF5P13349 255 aa16.93■□□□□ 0.3
CMTM3-205ENST00000562707 LSSP48449 732 aa16.93■□□□□ 0.3
CMTM3-205ENST00000562707 DNA2P51530 1060 aa16.93■□□□□ 0.3
CMTM3-205ENST00000562707 TMPRSS3P57727 454 aa16.93■□□□□ 0.3
CMTM3-205ENST00000562707 ERVPABLB-1P60509 514 aa16.93■□□□□ 0.3
CMTM3-205ENST00000562707 APBA1Q02410 837 aa16.93■□□□□ 0.3
CMTM3-205ENST00000562707 CFHR1Q03591 330 aa16.93■□□□□ 0.3
CMTM3-205ENST00000562707 TMEM259Q4ZIN3 620 aa16.93■□□□□ 0.3
CMTM3-205ENST00000562707 KIAA1161Q6NSJ0 714 aa16.93■□□□□ 0.3
CMTM3-205ENST00000562707 DPY19L3Q6ZPD9 716 aa16.93■□□□□ 0.3
CMTM3-205ENST00000562707 ZNF683Q8IZ20 524 aa16.93■□□□□ 0.3
CMTM3-205ENST00000562707 SLC22A18ASQ8N1D0 253 aa16.93■□□□□ 0.3
CMTM3-205ENST00000562707 MAPK15Q8TD08 544 aa16.93■□□□□ 0.3
CMTM3-205ENST00000562707 PGAP3Q96FM1 320 aaPredicted RBP16.93■□□□□ 0.3
CMTM3-205ENST00000562707 HIC2Q96JB3 615 aa16.93■□□□□ 0.3
CMTM3-205ENST00000562707 BMFQ96LC9 184 aa16.93■□□□□ 0.3
CMTM3-205ENST00000562707 POLR1BQ9H9Y6 1135 aa16.93■□□□□ 0.3
CMTM3-205ENST00000562707 ANLNQ9NQW6 1124 aa16.93■□□□□ 0.3
CMTM3-205ENST00000562707 MPP6Q9NZW5 540 aa16.93■□□□□ 0.3
CMTM3-205ENST00000562707 DNAJC12Q9UKB3 198 aa16.93■□□□□ 0.3
CMTM3-205ENST00000562707 GCN1Q92616 2671 aaKnown RBP16.93■□□□□ 0.3
CMTM3-205ENST00000562707 ILVBLA1L0T0 632 aa16.92■□□□□ 0.3
CMTM3-205ENST00000562707 GTPBP10A4D1E9 387 aaKnown RBP16.92■□□□□ 0.3
CMTM3-205ENST00000562707 ERVH48-1M5A8F1 160 aa16.92■□□□□ 0.3
CMTM3-205ENST00000562707 RNF103O00237 685 aa16.92■□□□□ 0.3
CMTM3-205ENST00000562707 SRGAP2O75044 1071 aa16.92■□□□□ 0.3
CMTM3-205ENST00000562707 DXOO77932 396 aaKnown RBP16.92■□□□□ 0.3
CMTM3-205ENST00000562707 TFE3P19532 575 aaPredicted RBP16.92■□□□□ 0.3
CMTM3-205ENST00000562707 PON1P27169 355 aa16.92■□□□□ 0.3
CMTM3-205ENST00000562707 BPIFB4P59827 614 aa16.92■□□□□ 0.3
CMTM3-205ENST00000562707 RHDQ02161 417 aa16.92■□□□□ 0.3
CMTM3-205ENST00000562707 SGCGQ13326 291 aa16.92■□□□□ 0.3
CMTM3-205ENST00000562707 OTUD1Q5VV17 481 aaPredicted RBP16.92■□□□□ 0.3
CMTM3-205ENST00000562707 KYAT3Q6YP21 454 aaKnown RBP16.92■□□□□ 0.3
CMTM3-205ENST00000562707 ZNF783Q6ZMS7 281 aa16.92■□□□□ 0.3
CMTM3-205ENST00000562707 SLC47A2Q86VL8 602 aa16.92■□□□□ 0.3
CMTM3-205ENST00000562707 ZSCAN30Q86W11 494 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms