RNA–Protein interactions for RNA: ENST00000562668.1

SMG1-206, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 3

Gene SMG1, Length 449 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-206ENST00000562668 MYH15Q9Y2K3 1946 aa5.09□□□□□ -1.59
SMG1-206ENST00000562668 IGLV3-22A0A075B6J6 115 aa5.09□□□□□ -1.59
SMG1-206ENST00000562668 A0A1W2PPL8 197 aa5.09□□□□□ -1.59
SMG1-206ENST00000562668 ASB14A6NK59 587 aa5.09□□□□□ -1.59
SMG1-206ENST00000562668 AP4M1O00189 453 aa5.09□□□□□ -1.59
SMG1-206ENST00000562668 CPLX1O14810 134 aa5.09□□□□□ -1.59
SMG1-206ENST00000562668 SEPT4O43236 478 aa5.09□□□□□ -1.59
SMG1-206ENST00000562668 UBXN7O94888 489 aa5.09□□□□□ -1.59
SMG1-206ENST00000562668 MMP1P03956 469 aa5.09□□□□□ -1.59
SMG1-206ENST00000562668 CYP3A4P08684 503 aa5.09□□□□□ -1.59
SMG1-206ENST00000562668 MYCLP12524 364 aaPredicted RBP5.09□□□□□ -1.59
SMG1-206ENST00000562668 ICAM3P32942 547 aa5.09□□□□□ -1.59
SMG1-206ENST00000562668 NR4A2P43354 598 aa5.09□□□□□ -1.59
SMG1-206ENST00000562668 UBXN2AP68543 259 aa5.09□□□□□ -1.59
SMG1-206ENST00000562668 ACVR2BQ13705 512 aa5.09□□□□□ -1.59
SMG1-206ENST00000562668 ZNF268Q14587 947 aaPredicted RBP5.09□□□□□ -1.59
SMG1-206ENST00000562668 PLA1AQ53H76 456 aa5.09□□□□□ -1.59
SMG1-206ENST00000562668 CERCAMQ5T4B2 595 aa5.09□□□□□ -1.59
SMG1-206ENST00000562668 CCSAPQ6IQ19 270 aaPredicted RBP5.09□□□□□ -1.59
SMG1-206ENST00000562668 KRT73Q86Y46 540 aa5.09□□□□□ -1.59
SMG1-206ENST00000562668 SFTPA1Q8IWL2 248 aa5.09□□□□□ -1.59
SMG1-206ENST00000562668 FBXO16Q8IX29 292 aaPredicted RBP5.09□□□□□ -1.59
SMG1-206ENST00000562668 PRSS3P2Q8NHM4 247 aa5.09□□□□□ -1.59
SMG1-206ENST00000562668 CUL5Q93034 780 aa5.09□□□□□ -1.59
SMG1-206ENST00000562668 HMCESQ96FZ2 354 aa5.09□□□□□ -1.59
SMG1-206ENST00000562668 MBOAT7Q96N66 472 aa5.09□□□□□ -1.59
SMG1-206ENST00000562668 INPP4AQ96PE3 977 aaPredicted RBP5.09□□□□□ -1.59
SMG1-206ENST00000562668 IWS1Q96ST2 819 aa5.09□□□□□ -1.59
SMG1-206ENST00000562668 TMEM79Q9BSE2 394 aa5.09□□□□□ -1.59
SMG1-206ENST00000562668 MS4A7Q9GZW8 240 aaPredicted RBP5.09□□□□□ -1.59
SMG1-206ENST00000562668 UPF3AQ9H1J1 476 aaKnown RBP5.09□□□□□ -1.59
SMG1-206ENST00000562668 ABHD16BQ9H3Z7 469 aa5.09□□□□□ -1.59
SMG1-206ENST00000562668 TYW1Q9NV66 732 aaKnown RBP5.09□□□□□ -1.59
SMG1-206ENST00000562668 TRNAU1APQ9NX07 287 aaKnown RBP5.09□□□□□ -1.59
SMG1-206ENST00000562668 ADD3Q9UEY8 706 aaKnown RBP5.09□□□□□ -1.59
SMG1-206ENST00000562668 OGDHLQ9ULD0 1010 aa5.09□□□□□ -1.59
SMG1-206ENST00000562668 UBIAD1Q9Y5Z9 338 aa5.09□□□□□ -1.59
SMG1-206ENST00000562668 WDR81Q562E7 1941 aa5.08□□□□□ -1.6
SMG1-206ENST00000562668 CYP3A7-CYP3A51PA0A087WV96 503 aa5.08□□□□□ -1.6
SMG1-206ENST00000562668 TCRBV5S1A1TA0A578 114 aa5.08□□□□□ -1.6
SMG1-206ENST00000562668 E2F8A0AVK6 867 aa5.08□□□□□ -1.6
SMG1-206ENST00000562668 KIF28PB7ZC32 967 aa5.08□□□□□ -1.6
SMG1-206ENST00000562668 FAM86B1E9PN63 330 aa5.08□□□□□ -1.6
SMG1-206ENST00000562668 BTN3A1O00481 513 aa5.08□□□□□ -1.6
SMG1-206ENST00000562668 TRIM38O00635 465 aa5.08□□□□□ -1.6
SMG1-206ENST00000562668 ATP9AO75110 1047 aa5.08□□□□□ -1.6
SMG1-206ENST00000562668 EIF3JO75822 258 aaKnown RBP5.08□□□□□ -1.6
SMG1-206ENST00000562668 SGPL1O95470 568 aa5.08□□□□□ -1.6
SMG1-206ENST00000562668 FAM86B2P0C5J1 330 aa5.08□□□□□ -1.6
SMG1-206ENST00000562668 CYP3A7P24462 503 aa5.08□□□□□ -1.6
SMG1-206ENST00000562668 ATP5F1P24539 256 aaPredicted RBP5.08□□□□□ -1.6
SMG1-206ENST00000562668 GJB2P29033 226 aa5.08□□□□□ -1.6
SMG1-206ENST00000562668 CIITAP33076 1130 aa5.08□□□□□ -1.6
SMG1-206ENST00000562668 MRPL12P52815 198 aaKnown RBP5.08□□□□□ -1.6
SMG1-206ENST00000562668 HMGN5P82970 282 aaKnown RBP5.08□□□□□ -1.6
SMG1-206ENST00000562668 PSG6Q00889 435 aa5.08□□□□□ -1.6
SMG1-206ENST00000562668 ARHGAP1Q07960 439 aa5.08□□□□□ -1.6
SMG1-206ENST00000562668 CTBP1Q13363 440 aa5.08□□□□□ -1.6
SMG1-206ENST00000562668 FAM187BQ17R55 369 aa5.08□□□□□ -1.6
SMG1-206ENST00000562668 JAKMIP3Q5VZ66 844 aa5.08□□□□□ -1.6
SMG1-206ENST00000562668 MFSD14CQ5VZR4 134 aa5.08□□□□□ -1.6
SMG1-206ENST00000562668 AWAT2Q6E213 333 aa5.08□□□□□ -1.6
SMG1-206ENST00000562668 GALNT17Q6IS24 598 aa5.08□□□□□ -1.6
SMG1-206ENST00000562668 CPLX2Q6PUV4 134 aaKnown RBP5.08□□□□□ -1.6
SMG1-206ENST00000562668 ZNF813Q6ZN06 617 aa5.08□□□□□ -1.6
SMG1-206ENST00000562668 BCDIN3DQ7Z5W3 292 aaKnown RBP5.08□□□□□ -1.6
SMG1-206ENST00000562668 BLIDQ8IZY5 108 aa5.08□□□□□ -1.6
SMG1-206ENST00000562668 SIRT6Q8N6T7 355 aa5.08□□□□□ -1.6
SMG1-206ENST00000562668 KLHDC9Q8NEP7 349 aa5.08□□□□□ -1.6
SMG1-206ENST00000562668 CCDC148Q8NFR7 591 aa5.08□□□□□ -1.6
SMG1-206ENST00000562668 PPP1R35Q8TAP8 253 aa5.08□□□□□ -1.6
SMG1-206ENST00000562668 U2AF1L4Q8WU68 220 aaKnown RBP5.08□□□□□ -1.6
SMG1-206ENST00000562668 NT5C1BQ96P26 610 aa5.08□□□□□ -1.6
SMG1-206ENST00000562668 FYTTD1Q96QD9 318 aaKnown RBP5.08□□□□□ -1.6
SMG1-206ENST00000562668 C17orf80Q9BSJ5 609 aa5.08□□□□□ -1.6
SMG1-206ENST00000562668 KRTAP1-5Q9BYS1 174 aa5.08□□□□□ -1.6
SMG1-206ENST00000562668 ZMAT3Q9HA38 289 aaKnown RBP5.08□□□□□ -1.6
SMG1-206ENST00000562668 C6orf50Q9HD87 102 aa5.08□□□□□ -1.6
SMG1-206ENST00000562668 ASIC5Q9NY37 505 aa5.08□□□□□ -1.6
SMG1-206ENST00000562668 CAMSAP3Q9P1Y5 1249 aaPredicted RBP5.08□□□□□ -1.6
SMG1-206ENST00000562668 DDX20Q9UHI6 824 aaKnown RBP5.08□□□□□ -1.6
SMG1-206ENST00000562668 AMFRQ9UKV5 643 aa5.08□□□□□ -1.6
SMG1-206ENST00000562668 SYNRGQ9UMZ2 1314 aa5.07□□□□□ -1.6
SMG1-206ENST00000562668 BTBD18B2RXH4 712 aa5.07□□□□□ -1.6
SMG1-206ENST00000562668 DUSP11O75319 330 aaKnown RBP5.07□□□□□ -1.6
SMG1-206ENST00000562668 STAM2O75886 525 aa5.07□□□□□ -1.6
SMG1-206ENST00000562668 NTN1O95631 604 aa5.07□□□□□ -1.6
SMG1-206ENST00000562668 ARP10275 920 aa5.07□□□□□ -1.6
SMG1-206ENST00000562668 AKR1A1P14550 325 aa5.07□□□□□ -1.6
SMG1-206ENST00000562668 EN2P19622 333 aaPredicted RBP5.07□□□□□ -1.6
SMG1-206ENST00000562668 U2AF2P26368 475 aaKnown RBP eCLIP5.07□□□□□ -1.6
SMG1-206ENST00000562668 IL1R2P27930 398 aa5.07□□□□□ -1.6
SMG1-206ENST00000562668 CST5P28325 142 aaPredicted RBP5.07□□□□□ -1.6
SMG1-206ENST00000562668 GNA11P29992 359 aa5.07□□□□□ -1.6
SMG1-206ENST00000562668 CCND2P30279 289 aa5.07□□□□□ -1.6
SMG1-206ENST00000562668 DDIT3P35638 169 aa5.07□□□□□ -1.6
SMG1-206ENST00000562668 RGS19P49795 217 aa5.07□□□□□ -1.6
SMG1-206ENST00000562668 NLRP5P59047 1200 aa5.07□□□□□ -1.6
SMG1-206ENST00000562668 SUMO2P61956 95 aaKnown RBP5.07□□□□□ -1.6
SMG1-206ENST00000562668 AKAP17AQ02040 695 aaKnown RBP5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms