RNA–Protein interactions for RNA: ENST00000562389.5

CLK3-207, Transcript of CDC like kinase 3, humanhuman

TSL 4

Gene CLK3, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-207ENST00000562389 HYOU1Q9Y4L1 999 aa17.04■□□□□ 0.32
CLK3-207ENST00000562389 DUSP10Q9Y6W6 482 aa17.04■□□□□ 0.32
CLK3-207ENST00000562389 MYO15AQ9UKN7 3530 aa17.04■□□□□ 0.32
CLK3-207ENST00000562389 USP34Q70CQ2 3546 aa17.04■□□□□ 0.32
CLK3-207ENST00000562389 DFFAO00273 331 aa17.03■□□□□ 0.32
CLK3-207ENST00000562389 MID1O15344 667 aa17.03■□□□□ 0.32
CLK3-207ENST00000562389 PRAMEF11O60813 436 aa17.03■□□□□ 0.32
CLK3-207ENST00000562389 C5AR1P21730 350 aa17.03■□□□□ 0.32
CLK3-207ENST00000562389 RECQLP46063 649 aaPredicted RBP17.03■□□□□ 0.32
CLK3-207ENST00000562389 PSMD8P48556 350 aa17.03■□□□□ 0.32
CLK3-207ENST00000562389 KIF5AQ12840 1032 aa17.03■□□□□ 0.32
CLK3-207ENST00000562389 SFSWAPQ12872 951 aaKnown RBP17.03■□□□□ 0.32
CLK3-207ENST00000562389 LPAL2Q16609 132 aa17.03■□□□□ 0.32
CLK3-207ENST00000562389 USP30Q70CQ3 517 aa17.03■□□□□ 0.32
CLK3-207ENST00000562389 DAAM2Q86T65 1068 aa17.03■□□□□ 0.32
CLK3-207ENST00000562389 PCDH19Q8TAB3 1148 aa17.03■□□□□ 0.32
CLK3-207ENST00000562389 TNKS2Q9H2K2 1166 aa17.03■□□□□ 0.32
CLK3-207ENST00000562389 GOLPH3Q9H4A6 298 aa17.03■□□□□ 0.32
CLK3-207ENST00000562389 UBA2Q9UBT2 640 aaPredicted RBP17.03■□□□□ 0.32
CLK3-207ENST00000562389 GMEB2Q9UKD1 530 aa17.03■□□□□ 0.32
CLK3-207ENST00000562389 PPM1HQ9ULR3 514 aa17.03■□□□□ 0.32
CLK3-207ENST00000562389 ADGRG1Q9Y653 693 aa17.03■□□□□ 0.32
CLK3-207ENST00000562389 LRRD1A4D1F6 860 aa17.02■□□□□ 0.32
CLK3-207ENST00000562389 C3orf70A6NLC5 250 aaPredicted RBP17.02■□□□□ 0.32
CLK3-207ENST00000562389 C1QTNF3-AMACRE9PGA6 284 aa17.02■□□□□ 0.32
CLK3-207ENST00000562389 J3KR12 359 aa17.02■□□□□ 0.32
CLK3-207ENST00000562389 MAP3K13O43283 966 aa17.02■□□□□ 0.32
CLK3-207ENST00000562389 BNIP3LO60238 219 aa17.02■□□□□ 0.32
CLK3-207ENST00000562389 GFRA3O60609 400 aa17.02■□□□□ 0.32
CLK3-207ENST00000562389 TMCC1O94876 653 aa17.02■□□□□ 0.32
CLK3-207ENST00000562389 EPN2O95208 641 aa17.02■□□□□ 0.32
CLK3-207ENST00000562389 GSRP00390 522 aa17.02■□□□□ 0.32
CLK3-207ENST00000562389 IL1BP01584 269 aa17.02■□□□□ 0.32
CLK3-207ENST00000562389 KRT1P04264 644 aa17.02■□□□□ 0.32
CLK3-207ENST00000562389 SLC8A1P32418 973 aa17.02■□□□□ 0.32
CLK3-207ENST00000562389 NAP1L1P55209 391 aaKnown RBP17.02■□□□□ 0.32
CLK3-207ENST00000562389 CCZ1BP86790 482 aa17.02■□□□□ 0.32
CLK3-207ENST00000562389 CCZ1P86791 482 aaPredicted RBP17.02■□□□□ 0.32
CLK3-207ENST00000562389 RPL6Q02878 288 aaKnown RBP17.02■□□□□ 0.32
CLK3-207ENST00000562389 IL10RBQ08334 325 aa17.02■□□□□ 0.32
CLK3-207ENST00000562389 PAFAH1B3Q15102 231 aaKnown RBP17.02■□□□□ 0.32
CLK3-207ENST00000562389 IFI16Q16666 785 aaKnown RBP17.02■□□□□ 0.32
CLK3-207ENST00000562389 CARD16Q5EG05 197 aa17.02■□□□□ 0.32
CLK3-207ENST00000562389 FAM46CQ5VWP2 391 aa17.02■□□□□ 0.32
CLK3-207ENST00000562389 NCBP2-AS2Q69YL0 99 aa17.02■□□□□ 0.32
CLK3-207ENST00000562389 LEKR1Q6ZMV7 388 aa17.02■□□□□ 0.32
CLK3-207ENST00000562389 DPY19L3Q6ZPD9 716 aa17.02■□□□□ 0.32
CLK3-207ENST00000562389 LPCAT2Q7L5N7 544 aa17.02■□□□□ 0.32
CLK3-207ENST00000562389 TP53INP2Q8IXH6 220 aa17.02■□□□□ 0.32
CLK3-207ENST00000562389 TOE1Q96GM8 510 aaKnown RBP17.02■□□□□ 0.32
CLK3-207ENST00000562389 SP110Q9HB58 689 aa17.02■□□□□ 0.32
CLK3-207ENST00000562389 DMDP11532 3685 aa17.01■□□□□ 0.31
CLK3-207ENST00000562389 A0A0U1RQJ8 604 aa17.01■□□□□ 0.31
CLK3-207ENST00000562389 NRDCO43847 1150 aa17.01■□□□□ 0.31
CLK3-207ENST00000562389 MFSD11O43934 449 aa17.01■□□□□ 0.31
CLK3-207ENST00000562389 NDUFS2O75306 463 aa17.01■□□□□ 0.31
CLK3-207ENST00000562389 PRNPP04156 253 aa17.01■□□□□ 0.31
CLK3-207ENST00000562389 CTSLP07711 333 aa17.01■□□□□ 0.31
CLK3-207ENST00000562389 RETP07949 1114 aa17.01■□□□□ 0.31
CLK3-207ENST00000562389 TNNT1P13805 278 aa17.01■□□□□ 0.31
CLK3-207ENST00000562389 CHRNA3P32297 505 aa17.01■□□□□ 0.31
CLK3-207ENST00000562389 SNRPD1P62314 119 aaKnown RBP17.01■□□□□ 0.31
CLK3-207ENST00000562389 ARHGAP36Q6ZRI8 547 aa17.01■□□□□ 0.31
CLK3-207ENST00000562389 PQLC3Q8N755 202 aa17.01■□□□□ 0.31
CLK3-207ENST00000562389 LRRC57Q8N9N7 239 aa17.01■□□□□ 0.31
CLK3-207ENST00000562389 NETO2Q8NC67 525 aa17.01■□□□□ 0.31
CLK3-207ENST00000562389 CHST14Q8NCH0 376 aa17.01■□□□□ 0.31
CLK3-207ENST00000562389 TMIEQ8NEW7 156 aa17.01■□□□□ 0.31
CLK3-207ENST00000562389 OR2AP1Q8NGE2 309 aa17.01■□□□□ 0.31
CLK3-207ENST00000562389 PIP4K2CQ8TBX8 421 aa17.01■□□□□ 0.31
CLK3-207ENST00000562389 RUBCNQ92622 972 aa17.01■□□□□ 0.31
CLK3-207ENST00000562389 FAM131CQ96AQ9 280 aa17.01■□□□□ 0.31
CLK3-207ENST00000562389 RNF157Q96PX1 679 aa17.01■□□□□ 0.31
CLK3-207ENST00000562389 TM6SF2Q9BZW4 377 aa17.01■□□□□ 0.31
CLK3-207ENST00000562389 TSGA10Q9BZW7 698 aa17.01■□□□□ 0.31
CLK3-207ENST00000562389 SGK2Q9HBY8 427 aa17.01■□□□□ 0.31
CLK3-207ENST00000562389 FBXL12Q9NXK8 326 aa17.01■□□□□ 0.31
CLK3-207ENST00000562389 NCDNQ9UBB6 729 aa17.01■□□□□ 0.31
CLK3-207ENST00000562389 IL36AQ9UHA7 158 aa17.01■□□□□ 0.31
CLK3-207ENST00000562389 IPO11Q9UI26 975 aaKnown RBP17.01■□□□□ 0.31
CLK3-207ENST00000562389 SARDHQ9UL12 918 aa17.01■□□□□ 0.31
CLK3-207ENST00000562389 FZD4Q9ULV1 537 aa17.01■□□□□ 0.31
CLK3-207ENST00000562389 NCKAP1Q9Y2A7 1128 aa17.01■□□□□ 0.31
CLK3-207ENST00000562389 PCDHGA5Q9Y5G8 931 aa17.01■□□□□ 0.31
CLK3-207ENST00000562389 SHROOM3Q8TF72 1996 aa17■□□□□ 0.31
CLK3-207ENST00000562389 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa17■□□□□ 0.31
CLK3-207ENST00000562389 A0A1W2PP55 124 aa17■□□□□ 0.31
CLK3-207ENST00000562389 MACROD2A1Z1Q3 448 aa17■□□□□ 0.31
CLK3-207ENST00000562389 GRID2IPA4D2P6 1211 aa17■□□□□ 0.31
CLK3-207ENST00000562389 DNA2P51530 1060 aa17■□□□□ 0.31
CLK3-207ENST00000562389 CCNHP51946 323 aaPredicted RBP17■□□□□ 0.31
CLK3-207ENST00000562389 RFTN1Q14699 578 aaPredicted RBP17■□□□□ 0.31
CLK3-207ENST00000562389 CYTH1Q15438 398 aa17■□□□□ 0.31
CLK3-207ENST00000562389 ODF2Q5BJF6 829 aa17■□□□□ 0.31
CLK3-207ENST00000562389 FAM124AQ86V42 546 aa17■□□□□ 0.31
CLK3-207ENST00000562389 LRRC49Q8IUZ0 686 aa17■□□□□ 0.31
CLK3-207ENST00000562389 TMEFF1Q8IYR6 380 aa17■□□□□ 0.31
CLK3-207ENST00000562389 KATNAL2Q8IYT4 538 aa17■□□□□ 0.31
CLK3-207ENST00000562389 ATPAF2Q8N5M1 289 aa17■□□□□ 0.31
CLK3-207ENST00000562389 AADATQ8N5Z0 425 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms