RNA–Protein interactions for RNA: ENST00000561976.5

VPS9D1-202, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-202ENST00000561976 CAAP1Q9H8G2 361 aa14.18□□□□□ -0.14
VPS9D1-202ENST00000561976 COQ10BQ9H8M1 238 aa14.18□□□□□ -0.14
VPS9D1-202ENST00000561976 PDGFCQ9NRA1 345 aa14.18□□□□□ -0.14
VPS9D1-202ENST00000561976 PPP1R1BQ9UD71 204 aaPredicted RBP14.18□□□□□ -0.14
VPS9D1-202ENST00000561976 AP4S1Q9Y587 144 aa14.18□□□□□ -0.14
VPS9D1-202ENST00000561976 TCAF2A6NFQ2 919 aa14.18□□□□□ -0.14
VPS9D1-202ENST00000561976 KCNU1A8MYU2 1149 aa14.18□□□□□ -0.14
VPS9D1-202ENST00000561976 SBK3P0C264 359 aa14.18□□□□□ -0.14
VPS9D1-202ENST00000561976 ERCC2P18074 760 aa14.18□□□□□ -0.14
VPS9D1-202ENST00000561976 GRM5P41594 1212 aa14.18□□□□□ -0.14
VPS9D1-202ENST00000561976 ADARP55265 1226 aaKnown RBP14.18□□□□□ -0.14
VPS9D1-202ENST00000561976 PPIDQ08752 370 aaKnown RBP14.18□□□□□ -0.14
VPS9D1-202ENST00000561976 PDAP1Q13442 181 aaKnown RBP14.18□□□□□ -0.14
VPS9D1-202ENST00000561976 TMED1Q13445 227 aa14.18□□□□□ -0.14
VPS9D1-202ENST00000561976 KRT80Q6KB66 452 aa14.18□□□□□ -0.14
VPS9D1-202ENST00000561976 SLC41A1Q8IVJ1 513 aa14.18□□□□□ -0.14
VPS9D1-202ENST00000561976 SPATA6LQ8N4H0 392 aa14.18□□□□□ -0.14
VPS9D1-202ENST00000561976 BEST2Q8NFU1 509 aa14.18□□□□□ -0.14
VPS9D1-202ENST00000561976 ITFG2Q969R8 447 aa14.18□□□□□ -0.14
VPS9D1-202ENST00000561976 HSFY1Q96LI6 401 aa14.18□□□□□ -0.14
VPS9D1-202ENST00000561976 PHF12Q96QT6 1004 aa14.18□□□□□ -0.14
VPS9D1-202ENST00000561976 OMDQ99983 421 aa14.18□□□□□ -0.14
VPS9D1-202ENST00000561976 PCDHAC1Q9H158 963 aa14.18□□□□□ -0.14
VPS9D1-202ENST00000561976 DNAAF2Q9NVR5 837 aaKnown RBP14.18□□□□□ -0.14
VPS9D1-202ENST00000561976 GTSE1Q9NYZ3 720 aa14.18□□□□□ -0.14
VPS9D1-202ENST00000561976 XPR1Q9UBH6 696 aa14.18□□□□□ -0.14
VPS9D1-202ENST00000561976 CEPT1Q9Y6K0 416 aa14.18□□□□□ -0.14
VPS9D1-202ENST00000561976 MAGEB16A2A368 324 aa14.17□□□□□ -0.14
VPS9D1-202ENST00000561976 ZNF26P17031 533 aaPredicted RBP14.17□□□□□ -0.14
VPS9D1-202ENST00000561976 CDH2P19022 906 aaPredicted RBP14.17□□□□□ -0.14
VPS9D1-202ENST00000561976 HADHAP40939 763 aa14.17□□□□□ -0.14
VPS9D1-202ENST00000561976 SCNN1BP51168 640 aa14.17□□□□□ -0.14
VPS9D1-202ENST00000561976 PSME3P61289 254 aa14.17□□□□□ -0.14
VPS9D1-202ENST00000561976 NSUN2Q08J23 767 aaKnown RBP eCLIP14.17□□□□□ -0.14
VPS9D1-202ENST00000561976 DCTN2Q13561 401 aaKnown RBP14.17□□□□□ -0.14
VPS9D1-202ENST00000561976 SLC12A1Q13621 1099 aa14.17□□□□□ -0.14
VPS9D1-202ENST00000561976 RFTN1Q14699 578 aaPredicted RBP14.17□□□□□ -0.14
VPS9D1-202ENST00000561976 DGKDQ16760 1214 aa14.17□□□□□ -0.14
VPS9D1-202ENST00000561976 USP41Q3LFD5 358 aa14.17□□□□□ -0.14
VPS9D1-202ENST00000561976 SH3D19Q5HYK7 790 aa14.17□□□□□ -0.14
VPS9D1-202ENST00000561976 BORAQ6PGQ7 559 aa14.17□□□□□ -0.14
VPS9D1-202ENST00000561976 PIGZQ86VD9 579 aa14.17□□□□□ -0.14
VPS9D1-202ENST00000561976 LSMEM2Q8N112 164 aa14.17□□□□□ -0.14
VPS9D1-202ENST00000561976 SLC7A14Q8TBB6 771 aa14.17□□□□□ -0.14
VPS9D1-202ENST00000561976 LRTOMTQ8WZ04 291 aa14.17□□□□□ -0.14
VPS9D1-202ENST00000561976 FAM210AQ96ND0 272 aa14.17□□□□□ -0.14
VPS9D1-202ENST00000561976 GPR22Q99680 433 aa14.17□□□□□ -0.14
VPS9D1-202ENST00000561976 C1QTNF1Q9BXJ1 281 aa14.17□□□□□ -0.14
VPS9D1-202ENST00000561976 SUDS3Q9H7L9 328 aaPredicted RBP14.17□□□□□ -0.14
VPS9D1-202ENST00000561976 CHCHD3Q9NX63 227 aaKnown RBP14.17□□□□□ -0.14
VPS9D1-202ENST00000561976 RSL24D1Q9UHA3 163 aaKnown RBP14.17□□□□□ -0.14
VPS9D1-202ENST00000561976 PADI4Q9UM07 663 aa14.17□□□□□ -0.14
VPS9D1-202ENST00000561976 SNX13Q9Y5W8 968 aa14.17□□□□□ -0.14
VPS9D1-202ENST00000561976 A0A0J9YVX5 310 aa14.17□□□□□ -0.14
VPS9D1-202ENST00000561976 C7orf72A4D263 438 aa14.17□□□□□ -0.14
VPS9D1-202ENST00000561976 DLX3O60479 287 aa14.17□□□□□ -0.14
VPS9D1-202ENST00000561976 NFKB1P19838 968 aa14.17□□□□□ -0.14
VPS9D1-202ENST00000561976 NPY2RP49146 381 aa14.17□□□□□ -0.14
VPS9D1-202ENST00000561976 GALK1P51570 392 aa14.17□□□□□ -0.14
VPS9D1-202ENST00000561976 ZNF460Q14592 562 aa14.17□□□□□ -0.14
VPS9D1-202ENST00000561976 GJC2Q5T442 439 aaPredicted RBP14.17□□□□□ -0.14
VPS9D1-202ENST00000561976 LRRC8EQ6NSJ5 796 aa14.17□□□□□ -0.14
VPS9D1-202ENST00000561976 ZC3HC1Q86WB0 502 aaKnown RBP14.17□□□□□ -0.14
VPS9D1-202ENST00000561976 IFNLR1Q8IU57 520 aaPredicted RBP14.17□□□□□ -0.14
VPS9D1-202ENST00000561976 TMEM151AQ8N4L1 468 aa14.17□□□□□ -0.14
VPS9D1-202ENST00000561976 STYXQ8WUJ0 223 aa14.17□□□□□ -0.14
VPS9D1-202ENST00000561976 ASB9Q96DX5 294 aa14.17□□□□□ -0.14
VPS9D1-202ENST00000561976 SGF29Q96ES7 293 aa14.17□□□□□ -0.14
VPS9D1-202ENST00000561976 SLC2A11Q9BYW1 496 aa14.17□□□□□ -0.14
VPS9D1-202ENST00000561976 CIDEBQ9UHD4 219 aa14.17□□□□□ -0.14
VPS9D1-202ENST00000561976 STAP1Q9ULZ2 295 aa14.17□□□□□ -0.14
VPS9D1-202ENST00000561976 CITO14578 2027 aa14.17□□□□□ -0.14
VPS9D1-202ENST00000561976 FAM72CH0Y354 149 aa14.17□□□□□ -0.14
VPS9D1-202ENST00000561976 DCLK1O15075 740 aa14.17□□□□□ -0.14
VPS9D1-202ENST00000561976 CYP2B6P20813 491 aa14.17□□□□□ -0.14
VPS9D1-202ENST00000561976 TPI1P60174 286 aa14.17□□□□□ -0.14
VPS9D1-202ENST00000561976 DPYSQ14117 519 aa14.17□□□□□ -0.14
VPS9D1-202ENST00000561976 EML3Q32P44 896 aa14.17□□□□□ -0.14
VPS9D1-202ENST00000561976 FAM72AQ5TYM5 149 aa14.17□□□□□ -0.14
VPS9D1-202ENST00000561976 FAM72DQ6L9T8 149 aa14.17□□□□□ -0.14
VPS9D1-202ENST00000561976 FAM72BQ86X60 149 aa14.17□□□□□ -0.14
VPS9D1-202ENST00000561976 APOBEC3FQ8IUX4 373 aaKnown RBP14.17□□□□□ -0.14
VPS9D1-202ENST00000561976 CHERPQ8IWX8 916 aaKnown RBP14.17□□□□□ -0.14
VPS9D1-202ENST00000561976 MYO1HQ8N1T3 1032 aa14.17□□□□□ -0.14
VPS9D1-202ENST00000561976 GAB3Q8WWW8 586 aa14.17□□□□□ -0.14
VPS9D1-202ENST00000561976 TMEM79Q9BSE2 394 aa14.17□□□□□ -0.14
VPS9D1-202ENST00000561976 MLPHQ9BV36 600 aaPredicted RBP14.17□□□□□ -0.14
VPS9D1-202ENST00000561976 RHOJQ9H4E5 214 aa14.17□□□□□ -0.14
VPS9D1-202ENST00000561976 CNOT11Q9UKZ1 510 aaKnown RBP14.17□□□□□ -0.14
VPS9D1-202ENST00000561976 ACOT9Q9Y305 439 aa14.17□□□□□ -0.14
VPS9D1-202ENST00000561976 RNF11Q9Y3C5 154 aa14.17□□□□□ -0.14
VPS9D1-202ENST00000561976 TRPC5OSA6NMA1 111 aa14.16□□□□□ -0.14
VPS9D1-202ENST00000561976 DAB1O75553 588 aa14.16□□□□□ -0.14
VPS9D1-202ENST00000561976 SLC35E2BP0CK96 405 aa14.16□□□□□ -0.14
VPS9D1-202ENST00000561976 NOS2P35228 1153 aa14.16□□□□□ -0.14
VPS9D1-202ENST00000561976 TRIM25Q14258 630 aaKnown RBP14.16□□□□□ -0.14
VPS9D1-202ENST00000561976 FRG1Q14331 258 aaKnown RBP14.16□□□□□ -0.14
VPS9D1-202ENST00000561976 TTLL4Q14679 1199 aa14.16□□□□□ -0.14
VPS9D1-202ENST00000561976 ZNF618Q5T7W0 954 aa14.16□□□□□ -0.14
VPS9D1-202ENST00000561976 OTUD1Q5VV17 481 aaPredicted RBP14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms