RNA–Protein interactions for RNA: ENST00000561817.5

CAPN3-210, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-210ENST00000561817 ATP2A2P16615 1042 aaKnown RBP6.67□□□□□ -1.34
CAPN3-210ENST00000561817 PRKCHP24723 683 aa6.67□□□□□ -1.34
CAPN3-210ENST00000561817 DNAJB1P25685 340 aa6.67□□□□□ -1.34
CAPN3-210ENST00000561817 SLC6A4P31645 630 aa6.67□□□□□ -1.34
CAPN3-210ENST00000561817 ACTN2P35609 894 aa6.67□□□□□ -1.34
CAPN3-210ENST00000561817 GNALP38405 381 aa6.67□□□□□ -1.34
CAPN3-210ENST00000561817 SLCO1A2P46721 670 aa6.67□□□□□ -1.34
CAPN3-210ENST00000561817 IFNAR2P48551 515 aa6.67□□□□□ -1.34
CAPN3-210ENST00000561817 KPNA1P52294 538 aaPredicted RBP6.67□□□□□ -1.34
CAPN3-210ENST00000561817 NDST2P52849 883 aa6.67□□□□□ -1.34
CAPN3-210ENST00000561817 PPP2R2AP63151 447 aa6.67□□□□□ -1.34
CAPN3-210ENST00000561817 COG7P83436 770 aa6.67□□□□□ -1.34
CAPN3-210ENST00000561817 MTM1Q13496 603 aa6.67□□□□□ -1.34
CAPN3-210ENST00000561817 MPP2Q14168 576 aa6.67□□□□□ -1.34
CAPN3-210ENST00000561817 EFTUD2Q15029 972 aaKnown RBP eCLIP6.67□□□□□ -1.34
CAPN3-210ENST00000561817 HECTD3Q5T447 861 aa6.67□□□□□ -1.34
CAPN3-210ENST00000561817 SYCP2LQ5T4T6 812 aa6.67□□□□□ -1.34
CAPN3-210ENST00000561817 ACBD5Q5T8D3 534 aaPredicted RBP6.67□□□□□ -1.34
CAPN3-210ENST00000561817 FAM109BQ6ICB4 259 aaPredicted RBP6.67□□□□□ -1.34
CAPN3-210ENST00000561817 RWDD4Q6NW29 188 aaKnown RBP6.67□□□□□ -1.34
CAPN3-210ENST00000561817 LRRC8BQ6P9F7 803 aa6.67□□□□□ -1.34
CAPN3-210ENST00000561817 ARHGEF18Q6ZSZ5 1173 aa6.67□□□□□ -1.34
CAPN3-210ENST00000561817 CYS1Q717R9 158 aa6.67□□□□□ -1.34
CAPN3-210ENST00000561817 DNAJB7Q7Z6W7 309 aaPredicted RBP6.67□□□□□ -1.34
CAPN3-210ENST00000561817 PRPF39Q86UA1 669 aaKnown RBP6.67□□□□□ -1.34
CAPN3-210ENST00000561817 MIB1Q86YT6 1006 aa6.67□□□□□ -1.34
CAPN3-210ENST00000561817 TMC8Q8IU68 726 aa6.67□□□□□ -1.34
CAPN3-210ENST00000561817 LRRC49Q8IUZ0 686 aa6.67□□□□□ -1.34
CAPN3-210ENST00000561817 HERC6Q8IVU3 1022 aa6.67□□□□□ -1.34
CAPN3-210ENST00000561817 RIBC1Q8N443 379 aaPredicted RBP6.67□□□□□ -1.34
CAPN3-210ENST00000561817 FIBCD1Q8N539 461 aa6.67□□□□□ -1.34
CAPN3-210ENST00000561817 ATP11CQ8NB49 1132 aa6.67□□□□□ -1.34
CAPN3-210ENST00000561817 KLHL23Q8NBE8 558 aa6.67□□□□□ -1.34
CAPN3-210ENST00000561817 CCNYQ8ND76 341 aa6.67□□□□□ -1.34
CAPN3-210ENST00000561817 PHOSPHO2Q8TCD6 241 aa6.67□□□□□ -1.34
CAPN3-210ENST00000561817 FBF1Q8TES7 1133 aa6.67□□□□□ -1.34
CAPN3-210ENST00000561817 PYROXD1Q8WU10 500 aa6.67□□□□□ -1.34
CAPN3-210ENST00000561817 DCAKDQ8WVC6 231 aa6.67□□□□□ -1.34
CAPN3-210ENST00000561817 PSMG2Q969U7 264 aa6.67□□□□□ -1.34
CAPN3-210ENST00000561817 LRRC39Q96DD0 335 aa6.67□□□□□ -1.34
CAPN3-210ENST00000561817 OXNAD1Q96HP4 312 aaPredicted RBP6.67□□□□□ -1.34
CAPN3-210ENST00000561817 CDK5RAP1Q96SZ6 601 aaKnown RBP6.67□□□□□ -1.34
CAPN3-210ENST00000561817 VAT1Q99536 393 aa6.67□□□□□ -1.34
CAPN3-210ENST00000561817 RAD9AQ99638 391 aa6.67□□□□□ -1.34
CAPN3-210ENST00000561817 EBNA1BP2Q99848 306 aaKnown RBP6.67□□□□□ -1.34
CAPN3-210ENST00000561817 ZYG11BQ9C0D3 744 aa6.67□□□□□ -1.34
CAPN3-210ENST00000561817 RNF38Q9H0F5 515 aa6.67□□□□□ -1.34
CAPN3-210ENST00000561817 GBA3Q9H227 469 aa6.67□□□□□ -1.34
CAPN3-210ENST00000561817 CATSPERBQ9H7T0 1116 aa6.67□□□□□ -1.34
CAPN3-210ENST00000561817 CYP4F11Q9HBI6 524 aa6.67□□□□□ -1.34
CAPN3-210ENST00000561817 XAB2Q9HCS7 855 aaKnown RBP6.67□□□□□ -1.34
CAPN3-210ENST00000561817 CASS4Q9NQ75 786 aa6.67□□□□□ -1.34
CAPN3-210ENST00000561817 MRPL17Q9NRX2 175 aaKnown RBP6.67□□□□□ -1.34
CAPN3-210ENST00000561817 STK39Q9UEW8 545 aa6.67□□□□□ -1.34
CAPN3-210ENST00000561817 SLC24A2Q9UI40 661 aa6.67□□□□□ -1.34
CAPN3-210ENST00000561817 STOML2Q9UJZ1 356 aa6.67□□□□□ -1.34
CAPN3-210ENST00000561817 TRHDEQ9UKU6 1024 aa6.67□□□□□ -1.34
CAPN3-210ENST00000561817 VANGL2Q9ULK5 521 aa6.67□□□□□ -1.34
CAPN3-210ENST00000561817 MAGED2Q9UNF1 606 aaPredicted RBP6.67□□□□□ -1.34
CAPN3-210ENST00000561817 CHMP2BQ9UQN3 213 aa6.67□□□□□ -1.34
CAPN3-210ENST00000561817 PCDHB9Q9Y5E1 797 aa6.67□□□□□ -1.34
CAPN3-210ENST00000561817 INSL5Q9Y5Q6 135 aa6.67□□□□□ -1.34
CAPN3-210ENST00000561817 IRAK3Q9Y616 596 aa6.67□□□□□ -1.34
CAPN3-210ENST00000561817 CHD9Q3L8U1 2897 aa6.66□□□□□ -1.34
CAPN3-210ENST00000561817 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP6.66□□□□□ -1.34
CAPN3-210ENST00000561817 TCRBV9S1A1TA0A576 114 aa6.66□□□□□ -1.34
CAPN3-210ENST00000561817 C2orf78A6NCI8 922 aa6.66□□□□□ -1.34
CAPN3-210ENST00000561817 SMIM23A6NLE4 172 aa6.66□□□□□ -1.34
CAPN3-210ENST00000561817 SRRM3A6NNA2 597 aaPredicted RBP6.66□□□□□ -1.34
CAPN3-210ENST00000561817 TGM5O43548 720 aa6.66□□□□□ -1.34
CAPN3-210ENST00000561817 ACSL4O60488 711 aa6.66□□□□□ -1.34
CAPN3-210ENST00000561817 CDH16O75309 829 aa6.66□□□□□ -1.34
CAPN3-210ENST00000561817 SPAG6O75602 509 aa6.66□□□□□ -1.34
CAPN3-210ENST00000561817 FAM155BO75949 473 aa6.66□□□□□ -1.34
CAPN3-210ENST00000561817 STC2O76061 302 aa6.66□□□□□ -1.34
CAPN3-210ENST00000561817 ALDH1A2O94788 518 aa6.66□□□□□ -1.34
CAPN3-210ENST00000561817 JCHAINP01591 159 aa6.66□□□□□ -1.34
CAPN3-210ENST00000561817 HMBSP08397 361 aa6.66□□□□□ -1.34
CAPN3-210ENST00000561817 GSTA2P09210 222 aa6.66□□□□□ -1.34
CAPN3-210ENST00000561817 MYOGP15173 224 aa6.66□□□□□ -1.34
CAPN3-210ENST00000561817 NFKB1P19838 968 aa6.66□□□□□ -1.34
CAPN3-210ENST00000561817 TACR2P21452 398 aa6.66□□□□□ -1.34
CAPN3-210ENST00000561817 ADRA1AP35348 466 aa6.66□□□□□ -1.34
CAPN3-210ENST00000561817 ATP5C1P36542 298 aaKnown RBP6.66□□□□□ -1.34
CAPN3-210ENST00000561817 BMPR1AP36894 532 aa6.66□□□□□ -1.34
CAPN3-210ENST00000561817 MDH1P40925 334 aaKnown RBP6.66□□□□□ -1.34
CAPN3-210ENST00000561817 ALDH1A3P47895 512 aa6.66□□□□□ -1.34
CAPN3-210ENST00000561817 PPP3CCP48454 512 aa6.66□□□□□ -1.34
CAPN3-210ENST00000561817 GSK3AP49840 483 aa6.66□□□□□ -1.34
CAPN3-210ENST00000561817 RNF144AP50876 292 aaPredicted RBP6.66□□□□□ -1.34
CAPN3-210ENST00000561817 ATP1A2P50993 1020 aa6.66□□□□□ -1.34
CAPN3-210ENST00000561817 PAPOLAP51003 745 aaKnown RBP6.66□□□□□ -1.34
CAPN3-210ENST00000561817 ERVFC1P60507 584 aa6.66□□□□□ -1.34
CAPN3-210ENST00000561817 ZXDBP98169 803 aa6.66□□□□□ -1.34
CAPN3-210ENST00000561817 CREMQ03060 361 aa6.66□□□□□ -1.34
CAPN3-210ENST00000561817 TWF1Q12792 350 aa6.66□□□□□ -1.34
CAPN3-210ENST00000561817 MTA1Q13330 715 aa6.66□□□□□ -1.34
CAPN3-210ENST00000561817 PLD1Q13393 1074 aa6.66□□□□□ -1.34
CAPN3-210ENST00000561817 OLIG2Q13516 323 aa6.66□□□□□ -1.34
CAPN3-210ENST00000561817 SERINC3Q13530 473 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms