RNA–Protein interactions for RNA: ENST00000561517.5

CCDC113-203, Transcript of coiled-coil domain containing 113, humanhuman

TSL 4

Gene CCDC113, Length 557 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-203ENST00000561517 BNC1Q01954 994 aa15.8■□□□□ 0.12
CCDC113-203ENST00000561517 POLD3Q15054 466 aaPredicted RBP15.8■□□□□ 0.12
CCDC113-203ENST00000561517 NFKBIBQ15653 356 aa15.8■□□□□ 0.12
CCDC113-203ENST00000561517 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP15.8■□□□□ 0.12
CCDC113-203ENST00000561517 PCDH20Q8N6Y1 951 aaKnown RBP15.8■□□□□ 0.12
CCDC113-203ENST00000561517 OR2I1PQ8NGU4 316 aa15.8■□□□□ 0.12
CCDC113-203ENST00000561517 OR14C36Q8NHC7 312 aa15.8■□□□□ 0.12
CCDC113-203ENST00000561517 ISG20Q96AZ6 181 aaKnown RBP15.8■□□□□ 0.12
CCDC113-203ENST00000561517 EIF3CQ99613 913 aaKnown RBP15.8■□□□□ 0.12
CCDC113-203ENST00000561517 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.8■□□□□ 0.12
CCDC113-203ENST00000561517 CATSPERBQ9H7T0 1116 aa15.8■□□□□ 0.12
CCDC113-203ENST00000561517 TM9SF3Q9HD45 589 aa15.8■□□□□ 0.12
CCDC113-203ENST00000561517 AP4E1Q9UPM8 1137 aa15.8■□□□□ 0.12
CCDC113-203ENST00000561517 A0A087X0T9 212 aa15.79■□□□□ 0.12
CCDC113-203ENST00000561517 PLK4O00444 970 aa15.79■□□□□ 0.12
CCDC113-203ENST00000561517 FGF10O15520 208 aaPredicted RBP15.79■□□□□ 0.12
CCDC113-203ENST00000561517 PLRG1O43660 514 aaKnown RBP15.79■□□□□ 0.12
CCDC113-203ENST00000561517 CREB3O43889 395 aa15.79■□□□□ 0.12
CCDC113-203ENST00000561517 OPHN1O60890 802 aa15.79■□□□□ 0.12
CCDC113-203ENST00000561517 PRNPP04156 253 aa15.79■□□□□ 0.12
CCDC113-203ENST00000561517 FAM228BP0C875 321 aa15.79■□□□□ 0.12
CCDC113-203ENST00000561517 MIPP30301 263 aa15.79■□□□□ 0.12
CCDC113-203ENST00000561517 RECQLP46063 649 aaPredicted RBP15.79■□□□□ 0.12
CCDC113-203ENST00000561517 GRIA4P48058 902 aa15.79■□□□□ 0.12
CCDC113-203ENST00000561517 AFF3P51826 1226 aaKnown RBP15.79■□□□□ 0.12
CCDC113-203ENST00000561517 GEMIN4P57678 1058 aaKnown RBP15.79■□□□□ 0.12
CCDC113-203ENST00000561517 YBEYP58557 167 aaPredicted RBP15.79■□□□□ 0.12
CCDC113-203ENST00000561517 CNTN1Q12860 1018 aa15.79■□□□□ 0.12
CCDC113-203ENST00000561517 ACAP1Q15027 740 aa15.79■□□□□ 0.12
CCDC113-203ENST00000561517 ERMARDQ5T6L9 678 aa15.79■□□□□ 0.12
CCDC113-203ENST00000561517 AGBL4Q5VU57 503 aa15.79■□□□□ 0.12
CCDC113-203ENST00000561517 DPY19L3Q6ZPD9 716 aa15.79■□□□□ 0.12
CCDC113-203ENST00000561517 CYP4V2Q6ZWL3 525 aaPredicted RBP15.79■□□□□ 0.12
CCDC113-203ENST00000561517 PIP4P1Q86T03 277 aa15.79■□□□□ 0.12
CCDC113-203ENST00000561517 PSTKQ8IV42 348 aaKnown RBP15.79■□□□□ 0.12
CCDC113-203ENST00000561517 PLPP6Q8IY26 295 aa15.79■□□□□ 0.12
CCDC113-203ENST00000561517 UMODL1-AS1Q8N2C9 162 aa15.79■□□□□ 0.12
CCDC113-203ENST00000561517 CHST14Q8NCH0 376 aa15.79■□□□□ 0.12
CCDC113-203ENST00000561517 PEBP4Q96S96 227 aa15.79■□□□□ 0.12
CCDC113-203ENST00000561517 NCAPGQ9BPX3 1015 aa15.79■□□□□ 0.12
CCDC113-203ENST00000561517 SNRNP25Q9BV90 132 aaKnown RBP15.79■□□□□ 0.12
CCDC113-203ENST00000561517 TNKS2Q9H2K2 1166 aa15.79■□□□□ 0.12
CCDC113-203ENST00000561517 EBF2Q9HAK2 575 aa15.79■□□□□ 0.12
CCDC113-203ENST00000561517 GPATCH2LQ9NWQ4 482 aa15.79■□□□□ 0.12
CCDC113-203ENST00000561517 ARHGAP20Q9P2F6 1191 aa15.79■□□□□ 0.12
CCDC113-203ENST00000561517 MYO1AQ9UBC5 1043 aa15.79■□□□□ 0.12
CCDC113-203ENST00000561517 HPCAL4Q9UM19 191 aa15.79■□□□□ 0.12
CCDC113-203ENST00000561517 NENFQ9UMX5 172 aa15.79■□□□□ 0.12
CCDC113-203ENST00000561517 ACTL7AQ9Y615 435 aa15.79■□□□□ 0.12
CCDC113-203ENST00000561517 A0A1B0GVT2 93 aa15.78■□□□□ 0.12
CCDC113-203ENST00000561517 ZSCAN5CA6NGD5 496 aaPredicted RBP15.78■□□□□ 0.12
CCDC113-203ENST00000561517 LATO43561 262 aa15.78■□□□□ 0.12
CCDC113-203ENST00000561517 KDELR3O43731 214 aa15.78■□□□□ 0.12
CCDC113-203ENST00000561517 LRCH4O75427 683 aa15.78■□□□□ 0.12
CCDC113-203ENST00000561517 ADRB1P08588 477 aa15.78■□□□□ 0.12
CCDC113-203ENST00000561517 PCK1P35558 622 aa15.78■□□□□ 0.12
CCDC113-203ENST00000561517 CSNK1EP49674 416 aaKnown RBP15.78■□□□□ 0.12
CCDC113-203ENST00000561517 TPI1P60174 286 aa15.78■□□□□ 0.12
CCDC113-203ENST00000561517 RACK1P63244 317 aaKnown RBP15.78■□□□□ 0.12
CCDC113-203ENST00000561517 SLC14A1Q13336 389 aa15.78■□□□□ 0.12
CCDC113-203ENST00000561517 TRIM14Q14142 442 aa15.78■□□□□ 0.12
CCDC113-203ENST00000561517 TEAD4Q15561 434 aa15.78■□□□□ 0.12
CCDC113-203ENST00000561517 CA9Q16790 459 aa15.78■□□□□ 0.12
CCDC113-203ENST00000561517 POM121L1PQ3SYA9 428 aa15.78■□□□□ 0.12
CCDC113-203ENST00000561517 CARD16Q5EG05 197 aa15.78■□□□□ 0.12
CCDC113-203ENST00000561517 SPECC1LQ69YQ0 1117 aa15.78■□□□□ 0.12
CCDC113-203ENST00000561517 ALKBH5Q6P6C2 394 aaKnown RBP15.78■□□□□ 0.12
CCDC113-203ENST00000561517 IL27RAQ6UWB1 636 aa15.78■□□□□ 0.12
CCDC113-203ENST00000561517 ARRDC3Q96B67 414 aa15.78■□□□□ 0.12
CCDC113-203ENST00000561517 THAP2Q9H0W7 228 aa15.78■□□□□ 0.12
CCDC113-203ENST00000561517 DHX35Q9H5Z1 703 aaKnown RBP15.78■□□□□ 0.12
CCDC113-203ENST00000561517 IL36AQ9UHA7 158 aa15.78■□□□□ 0.12
CCDC113-203ENST00000561517 PCSK1NQ9UHG2 260 aa15.78■□□□□ 0.12
CCDC113-203ENST00000561517 FCF1Q9Y324 198 aaKnown RBP15.78■□□□□ 0.12
CCDC113-203ENST00000561517 WASF2Q9Y6W5 498 aa15.78■□□□□ 0.12
CCDC113-203ENST00000561517 ARID1BQ8NFD5 2236 aaPredicted RBP15.78■□□□□ 0.12
CCDC113-203ENST00000561517 TBC1D3DA0A087WVF3 549 aa15.77■□□□□ 0.12
CCDC113-203ENST00000561517 TBC1D3IA0A087WXS9 549 aa15.77■□□□□ 0.12
CCDC113-203ENST00000561517 TBC1D3EA0A087X179 549 aa15.77■□□□□ 0.12
CCDC113-203ENST00000561517 TBC1D3KA0A087X1G2 549 aa15.77■□□□□ 0.12
CCDC113-203ENST00000561517 TBC1D3FA6NER0 549 aaPredicted RBP15.77■□□□□ 0.12
CCDC113-203ENST00000561517 TBC1D3LB9A6J9 549 aa15.77■□□□□ 0.12
CCDC113-203ENST00000561517 RNF103O00237 685 aa15.77■□□□□ 0.12
CCDC113-203ENST00000561517 KPNA3O00505 521 aaPredicted RBP15.77■□□□□ 0.12
CCDC113-203ENST00000561517 PRPSAP2O60256 369 aa15.77■□□□□ 0.12
CCDC113-203ENST00000561517 CYP1A2P05177 515 aa15.77■□□□□ 0.12
CCDC113-203ENST00000561517 TBC1D3HP0C7X1 549 aa15.77■□□□□ 0.12
CCDC113-203ENST00000561517 CEACAM1P13688 526 aa15.77■□□□□ 0.12
CCDC113-203ENST00000561517 CD59P13987 128 aa15.77■□□□□ 0.12
CCDC113-203ENST00000561517 NOVA1P51513 510 aaKnown RBP15.77■□□□□ 0.12
CCDC113-203ENST00000561517 TAS2R38P59533 333 aa15.77■□□□□ 0.12
CCDC113-203ENST00000561517 PPP2CBP62714 309 aa15.77■□□□□ 0.12
CCDC113-203ENST00000561517 PPP2CAP67775 309 aa15.77■□□□□ 0.12
CCDC113-203ENST00000561517 PARP15Q460N3 678 aa15.77■□□□□ 0.12
CCDC113-203ENST00000561517 PIP5KL1Q5T9C9 394 aa15.77■□□□□ 0.12
CCDC113-203ENST00000561517 TBC1D3GQ6DHY5 549 aa15.77■□□□□ 0.12
CCDC113-203ENST00000561517 TBC1D3CQ6IPX1 549 aa15.77■□□□□ 0.12
CCDC113-203ENST00000561517 PSAPL1Q6NUJ1 521 aa15.77■□□□□ 0.12
CCDC113-203ENST00000561517 TRIM69Q86WT6 500 aa15.77■□□□□ 0.12
CCDC113-203ENST00000561517 VSTM4Q8IW00 320 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms