RNA–Protein interactions for RNA: ENST00000561242.1

TPM1-229, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-229ENST00000561242 CD6P30203 668 aa10.9□□□□□ -0.66
TPM1-229ENST00000561242 MMP13P45452 471 aa10.9□□□□□ -0.66
TPM1-229ENST00000561242 DHPSP49366 369 aaPredicted RBP10.9□□□□□ -0.66
TPM1-229ENST00000561242 SCNN1BP51168 640 aa10.9□□□□□ -0.66
TPM1-229ENST00000561242 EPHB1P54762 984 aa10.9□□□□□ -0.66
TPM1-229ENST00000561242 CCZ1BP86790 482 aa10.9□□□□□ -0.66
TPM1-229ENST00000561242 CCZ1P86791 482 aaPredicted RBP10.9□□□□□ -0.66
TPM1-229ENST00000561242 BCL2L1Q07817 233 aa10.9□□□□□ -0.66
TPM1-229ENST00000561242 SEMA3BQ13214 749 aa10.9□□□□□ -0.66
TPM1-229ENST00000561242 FZD5Q13467 585 aa10.9□□□□□ -0.66
TPM1-229ENST00000561242 CAMK2GQ13555 558 aaPredicted RBP10.9□□□□□ -0.66
TPM1-229ENST00000561242 DPYSQ14117 519 aa10.9□□□□□ -0.66
TPM1-229ENST00000561242 PAFAH1B3Q15102 231 aaKnown RBP10.9□□□□□ -0.66
TPM1-229ENST00000561242 SLC45A4Q5BKX6 768 aa10.9□□□□□ -0.66
TPM1-229ENST00000561242 TMEM215Q68D42 235 aa10.9□□□□□ -0.66
TPM1-229ENST00000561242 TBC1D3GQ6DHY5 549 aa10.9□□□□□ -0.66
TPM1-229ENST00000561242 TBC1D3CQ6IPX1 549 aa10.9□□□□□ -0.66
TPM1-229ENST00000561242 ERAP2Q6P179 960 aa10.9□□□□□ -0.66
TPM1-229ENST00000561242 C22orf39Q6P5X5 142 aa10.9□□□□□ -0.66
TPM1-229ENST00000561242 Q6ZVU0 165 aa10.9□□□□□ -0.66
TPM1-229ENST00000561242 RABEPKQ7Z6M1 372 aa10.9□□□□□ -0.66
TPM1-229ENST00000561242 FAM124AQ86V42 546 aa10.9□□□□□ -0.66
TPM1-229ENST00000561242 CACUL1Q86Y37 369 aa10.9□□□□□ -0.66
TPM1-229ENST00000561242 CDKL3Q8IVW4 592 aaPredicted RBP10.9□□□□□ -0.66
TPM1-229ENST00000561242 CCDC13Q8IYE1 715 aa10.9□□□□□ -0.66
TPM1-229ENST00000561242 TBC1D3Q8IZP1 549 aaPredicted RBP10.9□□□□□ -0.66
TPM1-229ENST00000561242 OR2AP1Q8NGE2 309 aa10.9□□□□□ -0.66
TPM1-229ENST00000561242 SNX19Q92543 992 aa10.9□□□□□ -0.66
TPM1-229ENST00000561242 NKD2Q969F2 451 aaPredicted RBP10.9□□□□□ -0.66
TPM1-229ENST00000561242 PPP1R2P1Q96PQ5 205 aa10.9□□□□□ -0.66
TPM1-229ENST00000561242 ACE2Q9BYF1 805 aaPredicted RBP10.9□□□□□ -0.66
TPM1-229ENST00000561242 OSBPL8Q9BZF1 889 aa10.9□□□□□ -0.66
TPM1-229ENST00000561242 TM6SF2Q9BZW4 377 aa10.9□□□□□ -0.66
TPM1-229ENST00000561242 TNKS2Q9H2K2 1166 aa10.9□□□□□ -0.66
TPM1-229ENST00000561242 TMEM245Q9H330 911 aa10.9□□□□□ -0.66
TPM1-229ENST00000561242 SGK2Q9HBY8 427 aa10.9□□□□□ -0.66
TPM1-229ENST00000561242 C11orf16Q9NQ32 467 aa10.9□□□□□ -0.66
TPM1-229ENST00000561242 PRSS16Q9NQE7 514 aa10.9□□□□□ -0.66
TPM1-229ENST00000561242 PRMT8Q9NR22 394 aaPredicted RBP10.9□□□□□ -0.66
TPM1-229ENST00000561242 HOMER3Q9NSC5 361 aa10.9□□□□□ -0.66
TPM1-229ENST00000561242 INTS6Q9UL03 887 aaKnown RBP10.9□□□□□ -0.66
TPM1-229ENST00000561242 CYP8B1Q9UNU6 501 aa10.9□□□□□ -0.66
TPM1-229ENST00000561242 EFR3BQ9Y2G0 817 aa10.9□□□□□ -0.66
TPM1-229ENST00000561242 FCF1Q9Y324 198 aaKnown RBP10.9□□□□□ -0.66
TPM1-229ENST00000561242 JRKLQ9Y4A0 524 aa10.9□□□□□ -0.66
TPM1-229ENST00000561242 BRWD1Q9NSI6 2320 aa10.89□□□□□ -0.67
TPM1-229ENST00000561242 GOLGA6L10A0A0M3HER8 536 aa10.89□□□□□ -0.67
TPM1-229ENST00000561242 HACD1B0YJ81 288 aa10.89□□□□□ -0.67
TPM1-229ENST00000561242 PRAMEF11O60813 436 aa10.89□□□□□ -0.67
TPM1-229ENST00000561242 TMCC1O94876 653 aa10.89□□□□□ -0.67
TPM1-229ENST00000561242 PCDH8O95206 1070 aa10.89□□□□□ -0.67
TPM1-229ENST00000561242 GAS8O95995 478 aa10.89□□□□□ -0.67
TPM1-229ENST00000561242 TCF4P15884 667 aa10.89□□□□□ -0.67
TPM1-229ENST00000561242 GARSP41250 739 aaKnown RBP10.89□□□□□ -0.67
TPM1-229ENST00000561242 PAFAH1B1P43034 410 aa10.89□□□□□ -0.67
TPM1-229ENST00000561242 LMAN1P49257 510 aa10.89□□□□□ -0.67
TPM1-229ENST00000561242 IRAK1P51617 712 aa10.89□□□□□ -0.67
TPM1-229ENST00000561242 ATXN3P54252 364 aaPredicted RBP10.89□□□□□ -0.67
TPM1-229ENST00000561242 GNG11P61952 73 aa10.89□□□□□ -0.67
TPM1-229ENST00000561242 SGCGQ13326 291 aa10.89□□□□□ -0.67
TPM1-229ENST00000561242 CST6Q15828 149 aa10.89□□□□□ -0.67
TPM1-229ENST00000561242 PPP2R5EQ16537 467 aa10.89□□□□□ -0.67
TPM1-229ENST00000561242 MYLK3Q32MK0 819 aa10.89□□□□□ -0.67
TPM1-229ENST00000561242 ARSIQ5FYB1 569 aa10.89□□□□□ -0.67
TPM1-229ENST00000561242 RNF43Q68DV7 783 aa10.89□□□□□ -0.67
TPM1-229ENST00000561242 TXNRD3NBQ6F5E7 133 aa10.89□□□□□ -0.67
TPM1-229ENST00000561242 MFSD7Q6UXD7 560 aa10.89□□□□□ -0.67
TPM1-229ENST00000561242 TMEM92Q6UXU6 159 aa10.89□□□□□ -0.67
TPM1-229ENST00000561242 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP10.89□□□□□ -0.67
TPM1-229ENST00000561242 GSTA5Q7RTV2 222 aa10.89□□□□□ -0.67
TPM1-229ENST00000561242 ADAT2Q7Z6V5 191 aaKnown RBP10.89□□□□□ -0.67
TPM1-229ENST00000561242 TTC7BQ86TV6 843 aa10.89□□□□□ -0.67
TPM1-229ENST00000561242 PRPF39Q86UA1 669 aaKnown RBP10.89□□□□□ -0.67
TPM1-229ENST00000561242 NT5DC3Q86UY8 548 aa10.89□□□□□ -0.67
TPM1-229ENST00000561242 PLPP6Q8IY26 295 aa10.89□□□□□ -0.67
TPM1-229ENST00000561242 TMIEQ8NEW7 156 aa10.89□□□□□ -0.67
TPM1-229ENST00000561242 OR14C36Q8NHC7 312 aa10.89□□□□□ -0.67
TPM1-229ENST00000561242 PCDH19Q8TAB3 1148 aa10.89□□□□□ -0.67
TPM1-229ENST00000561242 PIP4K2CQ8TBX8 421 aa10.89□□□□□ -0.67
TPM1-229ENST00000561242 GRIN3AQ8TCU5 1115 aa10.89□□□□□ -0.67
TPM1-229ENST00000561242 PDCD6IPQ8WUM4 868 aaKnown RBP10.89□□□□□ -0.67
TPM1-229ENST00000561242 GAB3Q8WWW8 586 aa10.89□□□□□ -0.67
TPM1-229ENST00000561242 PBKQ96KB5 322 aa10.89□□□□□ -0.67
TPM1-229ENST00000561242 MRGPRX1Q96LB2 322 aa10.89□□□□□ -0.67
TPM1-229ENST00000561242 C1QTNF7Q9BXJ2 289 aa10.89□□□□□ -0.67
TPM1-229ENST00000561242 FRMD8P1Q9BZ68 369 aaPredicted RBP10.89□□□□□ -0.67
TPM1-229ENST00000561242 MAGEB5Q9BZ81 275 aa10.89□□□□□ -0.67
TPM1-229ENST00000561242 POLR1EQ9GZS1 481 aaKnown RBP10.89□□□□□ -0.67
TPM1-229ENST00000561242 GOLPH3Q9H4A6 298 aa10.89□□□□□ -0.67
TPM1-229ENST00000561242 RBM22Q9NW64 420 aaKnown RBP eCLIP10.89□□□□□ -0.67
TPM1-229ENST00000561242 KLHL8Q9P2G9 620 aaPredicted RBP10.89□□□□□ -0.67
TPM1-229ENST00000561242 TRIM10Q9UDY6 481 aa10.89□□□□□ -0.67
TPM1-229ENST00000561242 AMACRQ9UHK6 382 aa10.89□□□□□ -0.67
TPM1-229ENST00000561242 INVSQ9Y283 1065 aa10.89□□□□□ -0.67
TPM1-229ENST00000561242 REXO2Q9Y3B8 237 aaKnown RBP10.89□□□□□ -0.67
TPM1-229ENST00000561242 NUP210Q8TEM1 1887 aaPredicted RBP10.89□□□□□ -0.67
TPM1-229ENST00000561242 MYO16Q9Y6X6 1858 aa10.89□□□□□ -0.67
TPM1-229ENST00000561242 NOTCH4Q99466 2003 aa10.89□□□□□ -0.67
TPM1-229ENST00000561242 LAMA2P24043 3122 aaKnown RBP10.88□□□□□ -0.67
TPM1-229ENST00000561242 RCCD1A6NED2 376 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms