RNA–Protein interactions for RNA: ENST00000561059.5

PSME1-208, Transcript of proteasome activator subunit 1, human

TSL 2

Gene PSME1, Length 947 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSME1-208	ENST00000561059	DRGX	A6NNA5	263 aa		13.69	□□□□□ -0.22
PSME1-208	ENST00000561059	LEFTY1	O75610	366 aa		13.69	□□□□□ -0.22
PSME1-208	ENST00000561059	GJB6	O95452	261 aa		13.69	□□□□□ -0.22
PSME1-208	ENST00000561059	MME	P08473	750 aa		13.69	□□□□□ -0.22
PSME1-208	ENST00000561059	CKMT2	P17540	419 aa		13.69	□□□□□ -0.22
PSME1-208	ENST00000561059	DGKA	P23743	735 aa		13.69	□□□□□ -0.22
PSME1-208	ENST00000561059	GK	P32189	559 aa		13.69	□□□□□ -0.22
PSME1-208	ENST00000561059	SNX16	P57768	344 aa		13.69	□□□□□ -0.22
PSME1-208	ENST00000561059	ATP11A	P98196	1134 aa		13.69	□□□□□ -0.22
PSME1-208	ENST00000561059	MAPK8IP2	Q13387	824 aa	Predicted RBP	13.69	□□□□□ -0.22
PSME1-208	ENST00000561059	PROX2	Q3B8N5	592 aa		13.69	□□□□□ -0.22
PSME1-208	ENST00000561059	SLC25A52	Q3SY17	297 aa		13.69	□□□□□ -0.22
PSME1-208	ENST00000561059	NAA35	Q5VZE5	725 aa		13.69	□□□□□ -0.22
PSME1-208	ENST00000561059	LEKR1	Q6ZMV7	388 aa		13.69	□□□□□ -0.22
PSME1-208	ENST00000561059	GCNT7	Q6ZNI0	430 aa		13.69	□□□□□ -0.22
PSME1-208	ENST00000561059	HORMAD1	Q86X24	394 aa		13.69	□□□□□ -0.22
PSME1-208	ENST00000561059	DCAF4L2	Q8NA75	395 aa		13.69	□□□□□ -0.22
PSME1-208	ENST00000561059	OR6K2	Q8NGY2	324 aa		13.69	□□□□□ -0.22
PSME1-208	ENST00000561059	SLC20A1	Q8WUM9	679 aa		13.69	□□□□□ -0.22
PSME1-208	ENST00000561059	NT5C3B	Q969T7	300 aa		13.69	□□□□□ -0.22
PSME1-208	ENST00000561059	SAMSN1	Q9NSI8	373 aa	Known RBP	13.69	□□□□□ -0.22
PSME1-208	ENST00000561059	IL36A	Q9UHA7	158 aa		13.69	□□□□□ -0.22
PSME1-208	ENST00000561059	TPX2	Q9ULW0	747 aa	Known RBP	13.69	□□□□□ -0.22
PSME1-208	ENST00000561059	FCF1	Q9Y324	198 aa	Known RBP	13.69	□□□□□ -0.22
PSME1-208	ENST00000561059	ASXL3	Q9C0F0	2248 aa		13.69	□□□□□ -0.22
PSME1-208	ENST00000561059	COL5A1	P20908	1838 aa	Predicted RBP	13.69	□□□□□ -0.22
PSME1-208	ENST00000561059	ZNF821	O75541	412 aa	Predicted RBP	13.68	□□□□□ -0.22
PSME1-208	ENST00000561059	NEBL	O76041	1014 aa		13.68	□□□□□ -0.22
PSME1-208	ENST00000561059	PRNP	P04156	253 aa		13.68	□□□□□ -0.22
PSME1-208	ENST00000561059	C1S	P09871	688 aa		13.68	□□□□□ -0.22
PSME1-208	ENST00000561059	ACVRL1	P37023	503 aa		13.68	□□□□□ -0.22
PSME1-208	ENST00000561059	EIF2S3	P41091	472 aa	Known RBP	13.68	□□□□□ -0.22
PSME1-208	ENST00000561059	ABCG1	P45844	678 aa		13.68	□□□□□ -0.22
PSME1-208	ENST00000561059	GABRB2	P47870	512 aa		13.68	□□□□□ -0.22
PSME1-208	ENST00000561059	KLK7	P49862	253 aa		13.68	□□□□□ -0.22
PSME1-208	ENST00000561059	DAB2	P98082	770 aa		13.68	□□□□□ -0.22
PSME1-208	ENST00000561059	INSM1	Q01101	510 aa	Predicted RBP	13.68	□□□□□ -0.22
PSME1-208	ENST00000561059	FGL2	Q14314	439 aa		13.68	□□□□□ -0.22
PSME1-208	ENST00000561059	CDO1	Q16878	200 aa		13.68	□□□□□ -0.22
PSME1-208	ENST00000561059	KLHDC7A	Q5VTJ3	777 aa		13.68	□□□□□ -0.22
PSME1-208	ENST00000561059	ERN2	Q76MJ5	926 aa	Known RBP	13.68	□□□□□ -0.22
PSME1-208	ENST00000561059	PTAR1	Q7Z6K3	402 aa	Predicted RBP	13.68	□□□□□ -0.22
PSME1-208	ENST00000561059	ZDHHC17	Q8IUH5	632 aa		13.68	□□□□□ -0.22
PSME1-208	ENST00000561059	SLC22A18AS	Q8N1D0	253 aa		13.68	□□□□□ -0.22
PSME1-208	ENST00000561059	NETO2	Q8NC67	525 aa		13.68	□□□□□ -0.22
PSME1-208	ENST00000561059	CCDC114	Q96M63	670 aa		13.68	□□□□□ -0.22
PSME1-208	ENST00000561059	TM6SF2	Q9BZW4	377 aa		13.68	□□□□□ -0.22
PSME1-208	ENST00000561059	ATP13A1	Q9HD20	1204 aa		13.68	□□□□□ -0.22
PSME1-208	ENST00000561059	METTL5	Q9NRN9	209 aa	Known RBP	13.68	□□□□□ -0.22
PSME1-208	ENST00000561059	NDFIP2	Q9NV92	336 aa		13.68	□□□□□ -0.22
PSME1-208	ENST00000561059	TAB2	Q9NYJ8	693 aa		13.68	□□□□□ -0.22
PSME1-208	ENST00000561059	RRN3	Q9NYV6	651 aa		13.68	□□□□□ -0.22
PSME1-208	ENST00000561059	ZNF212	Q9UDV6	495 aa		13.68	□□□□□ -0.22
PSME1-208	ENST00000561059	PCDHB1	Q9Y5F3	818 aa		13.68	□□□□□ -0.22
PSME1-208	ENST00000561059	RAI2	Q9Y5P3	530 aa		13.68	□□□□□ -0.22
PSME1-208	ENST00000561059	WASF2	Q9Y6W5	498 aa		13.68	□□□□□ -0.22
PSME1-208	ENST00000561059	KNTC1	P50748	2209 aa		13.67	□□□□□ -0.22
PSME1-208	ENST00000561059	IGLV3-10	A0A075B6K4	115 aa		13.67	□□□□□ -0.22
PSME1-208	ENST00000561059	RAD51B	O15315	384 aa		13.67	□□□□□ -0.22
PSME1-208	ENST00000561059	BRINP1	O60477	761 aa		13.67	□□□□□ -0.22
PSME1-208	ENST00000561059	MAGEC1	O60732	1142 aa		13.67	□□□□□ -0.22
PSME1-208	ENST00000561059	ZMPSTE24	O75844	475 aa		13.67	□□□□□ -0.22
PSME1-208	ENST00000561059	F9	P00740	461 aa		13.67	□□□□□ -0.22
PSME1-208	ENST00000561059	PRB1	P04280	392 aa		13.67	□□□□□ -0.22
PSME1-208	ENST00000561059	HNRNPA2B1	P22626	353 aa	Known RBP	13.67	□□□□□ -0.22
PSME1-208	ENST00000561059	AKT2	P31751	481 aa		13.67	□□□□□ -0.22
PSME1-208	ENST00000561059	CDH5	P33151	784 aa	Predicted RBP	13.67	□□□□□ -0.22
PSME1-208	ENST00000561059	NUDT1	P36639	197 aa		13.67	□□□□□ -0.22
PSME1-208	ENST00000561059	RECQL	P46063	649 aa	Predicted RBP	13.67	□□□□□ -0.22
PSME1-208	ENST00000561059	SERPINH1	P50454	418 aa	Known RBP	13.67	□□□□□ -0.22
PSME1-208	ENST00000561059	BPIFB4	P59827	614 aa		13.67	□□□□□ -0.22
PSME1-208	ENST00000561059	NOMO3	P69849	1222 aa		13.67	□□□□□ -0.22
PSME1-208	ENST00000561059	ARF5	P84085	180 aa		13.67	□□□□□ -0.22
PSME1-208	ENST00000561059	OVGP1	Q12889	678 aa		13.67	□□□□□ -0.22
PSME1-208	ENST00000561059	MTA1	Q13330	715 aa		13.67	□□□□□ -0.22
PSME1-208	ENST00000561059	C15orf59	Q2T9L4	293 aa	Predicted RBP	13.67	□□□□□ -0.22
PSME1-208	ENST00000561059	LRRC73	Q5JTD7	316 aa		13.67	□□□□□ -0.22
PSME1-208	ENST00000561059		Q6ZSR6	202 aa		13.67	□□□□□ -0.22
PSME1-208	ENST00000561059	PARS2	Q7L3T8	475 aa	Known RBP	13.67	□□□□□ -0.22
PSME1-208	ENST00000561059	SETD3	Q86TU7	594 aa	Predicted RBP	13.67	□□□□□ -0.22
PSME1-208	ENST00000561059	FAM114A1	Q8IWE2	563 aa		13.67	□□□□□ -0.22
PSME1-208	ENST00000561059	TMIE	Q8NEW7	156 aa		13.67	□□□□□ -0.22
PSME1-208	ENST00000561059	PGAP3	Q96FM1	320 aa	Predicted RBP	13.67	□□□□□ -0.22
PSME1-208	ENST00000561059	NAA15	Q9BXJ9	866 aa	Known RBP	13.67	□□□□□ -0.22
PSME1-208	ENST00000561059	OSBPL2	Q9H1P3	480 aa		13.67	□□□□□ -0.22
PSME1-208	ENST00000561059	CLSTN2	Q9H4D0	955 aa		13.67	□□□□□ -0.22
PSME1-208	ENST00000561059	ZDHHC6	Q9H6R6	413 aa		13.67	□□□□□ -0.22
PSME1-208	ENST00000561059	KLHL11	Q9NVR0	708 aa		13.67	□□□□□ -0.22
PSME1-208	ENST00000561059	DNAJC28	Q9NX36	388 aa		13.67	□□□□□ -0.22
PSME1-208	ENST00000561059	GGT7	Q9UJ14	662 aa		13.67	□□□□□ -0.22
PSME1-208	ENST00000561059	TMEM59L	Q9UK28	342 aa		13.67	□□□□□ -0.22
PSME1-208	ENST00000561059	CLCA2	Q9UQC9	943 aa		13.67	□□□□□ -0.22
PSME1-208	ENST00000561059	ITM2B	Q9Y287	266 aa		13.67	□□□□□ -0.22
PSME1-208	ENST00000561059	MGA	Q8IWI9	3026 aa		13.67	□□□□□ -0.22
PSME1-208	ENST00000561059	CFAP46	Q8IYW2	2715 aa		13.67	□□□□□ -0.22
PSME1-208	ENST00000561059	ARID1B	Q8NFD5	2236 aa	Predicted RBP	13.67	□□□□□ -0.22
PSME1-208	ENST00000561059	POM121B	A6NF01	834 aa		13.66	□□□□□ -0.22
PSME1-208	ENST00000561059		F8VZ95	297 aa		13.66	□□□□□ -0.22
PSME1-208	ENST00000561059	FAM72C	H0Y354	149 aa		13.66	□□□□□ -0.22
PSME1-208	ENST00000561059	PIAS2	O75928	621 aa		13.66	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms