RNA–Protein interactions for RNA: ENST00000561036.1

HDDC3-206, Transcript of HD domain containing 3, humanhuman

TSL 3

Gene HDDC3, Length 457 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-206ENST00000561036 ZNF180Q9UJW8 692 aa17.42■□□□□ 0.38
HDDC3-206ENST00000561036 IKBKGQ9Y6K9 419 aa17.42■□□□□ 0.38
HDDC3-206ENST00000561036 MYO18AQ92614 2054 aaKnown RBP17.41■□□□□ 0.38
HDDC3-206ENST00000561036 CHD5Q8TDI0 1954 aa17.41■□□□□ 0.38
HDDC3-206ENST00000561036 E2F8A0AVK6 867 aa17.41■□□□□ 0.38
HDDC3-206ENST00000561036 FAM159BA6NKW6 160 aa17.41■□□□□ 0.38
HDDC3-206ENST00000561036 SRRM3A6NNA2 597 aaPredicted RBP17.41■□□□□ 0.38
HDDC3-206ENST00000561036 GRXCR1A8MXD5 290 aa17.41■□□□□ 0.38
HDDC3-206ENST00000561036 TSPAN3O60637 253 aa17.41■□□□□ 0.38
HDDC3-206ENST00000561036 POLBP06746 335 aa17.41■□□□□ 0.38
HDDC3-206ENST00000561036 EPCAMP16422 314 aa17.41■□□□□ 0.38
HDDC3-206ENST00000561036 HOXD9P28356 352 aaPredicted RBP17.41■□□□□ 0.38
HDDC3-206ENST00000561036 OXCT1P55809 520 aa17.41■□□□□ 0.38
HDDC3-206ENST00000561036 KBTBD12Q3ZCT8 623 aa17.41■□□□□ 0.38
HDDC3-206ENST00000561036 MPP7Q5T2T1 576 aa17.41■□□□□ 0.38
HDDC3-206ENST00000561036 TRABD2AQ86V40 505 aa17.41■□□□□ 0.38
HDDC3-206ENST00000561036 LRRC6Q86X45 466 aa17.41■□□□□ 0.38
HDDC3-206ENST00000561036 CYP4X1Q8N118 509 aa17.41■□□□□ 0.38
HDDC3-206ENST00000561036 SPATA22Q8NHS9 363 aa17.41■□□□□ 0.38
HDDC3-206ENST00000561036 SHKBP1Q8TBC3 707 aa17.41■□□□□ 0.38
HDDC3-206ENST00000561036 DCAKDQ8WVC6 231 aa17.41■□□□□ 0.38
HDDC3-206ENST00000561036 TADA1Q96BN2 335 aa17.41■□□□□ 0.38
HDDC3-206ENST00000561036 SYBUQ9NX95 663 aa17.41■□□□□ 0.38
HDDC3-206ENST00000561036 CFAP97Q9P2B7 532 aa17.41■□□□□ 0.38
HDDC3-206ENST00000561036 TBK1Q9UHD2 729 aa17.41■□□□□ 0.38
HDDC3-206ENST00000561036 IQANK1A0A1B0GTG1 560 aa17.4■□□□□ 0.38
HDDC3-206ENST00000561036 FAM237BA0A1B0GVD1 139 aa17.4■□□□□ 0.38
HDDC3-206ENST00000561036 TBL1XO60907 577 aa17.4■□□□□ 0.38
HDDC3-206ENST00000561036 RFPL2O75678 378 aa17.4■□□□□ 0.38
HDDC3-206ENST00000561036 PAPLNO95428 1278 aa17.4■□□□□ 0.38
HDDC3-206ENST00000561036 RHOP08100 348 aa17.4■□□□□ 0.38
HDDC3-206ENST00000561036 INHBAP08476 426 aa17.4■□□□□ 0.38
HDDC3-206ENST00000561036 CES1P23141 567 aa17.4■□□□□ 0.38
HDDC3-206ENST00000561036 SGSHP51688 502 aa17.4■□□□□ 0.38
HDDC3-206ENST00000561036 ZXDBP98169 803 aa17.4■□□□□ 0.38
HDDC3-206ENST00000561036 CRYMQ14894 314 aa17.4■□□□□ 0.38
HDDC3-206ENST00000561036 GPR158Q5T848 1215 aa17.4■□□□□ 0.38
HDDC3-206ENST00000561036 LGSNQ5TDP6 509 aa17.4■□□□□ 0.38
HDDC3-206ENST00000561036 IL31Q6EBC2 164 aa17.4■□□□□ 0.38
HDDC3-206ENST00000561036 ALG1LQ6GMV1 187 aa17.4■□□□□ 0.38
HDDC3-206ENST00000561036 FAM109BQ6ICB4 259 aaPredicted RBP17.4■□□□□ 0.38
HDDC3-206ENST00000561036 CXorf57Q6NSI4 855 aaKnown RBP17.4■□□□□ 0.38
HDDC3-206ENST00000561036 KDELC1Q6UW63 502 aa17.4■□□□□ 0.38
HDDC3-206ENST00000561036 RANBP10Q6VN20 620 aa17.4■□□□□ 0.38
HDDC3-206ENST00000561036 SPRED2Q7Z698 418 aa17.4■□□□□ 0.38
HDDC3-206ENST00000561036 PRPF39Q86UA1 669 aaKnown RBP17.4■□□□□ 0.38
HDDC3-206ENST00000561036 TMEM135Q86UB9 458 aa17.4■□□□□ 0.38
HDDC3-206ENST00000561036 SLC26A11Q86WA9 606 aa17.4■□□□□ 0.38
HDDC3-206ENST00000561036 OR7D4Q8NG98 312 aa17.4■□□□□ 0.38
HDDC3-206ENST00000561036 PTCD2Q8WV60 388 aaKnown RBP17.4■□□□□ 0.38
HDDC3-206ENST00000561036 PRKD2Q9BZL6 878 aa17.4■□□□□ 0.38
HDDC3-206ENST00000561036 POLR1EQ9GZS1 481 aaKnown RBP17.4■□□□□ 0.38
HDDC3-206ENST00000561036 ARNT2Q9HBZ2 717 aa17.4■□□□□ 0.38
HDDC3-206ENST00000561036 SSU72Q9NP77 194 aaKnown RBP17.4■□□□□ 0.38
HDDC3-206ENST00000561036 UBP1Q9NZI7 540 aa17.4■□□□□ 0.38
HDDC3-206ENST00000561036 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.4■□□□□ 0.38
HDDC3-206ENST00000561036 DNMT3BQ9UBC3 853 aaKnown RBP17.4■□□□□ 0.38
HDDC3-206ENST00000561036 SEPT3Q9UH03 358 aa17.4■□□□□ 0.38
HDDC3-206ENST00000561036 A0A0D9SEW6 157 aa17.39■□□□□ 0.37
HDDC3-206ENST00000561036 LEFTY2O00292 366 aa17.39■□□□□ 0.37
HDDC3-206ENST00000561036 ZNF197O14709 1029 aa17.39■□□□□ 0.37
HDDC3-206ENST00000561036 USP12O75317 370 aa17.39■□□□□ 0.37
HDDC3-206ENST00000561036 MOSPD3O75425 235 aa17.39■□□□□ 0.37
HDDC3-206ENST00000561036 USP1O94782 785 aa17.39■□□□□ 0.37
HDDC3-206ENST00000561036 LUC7L3O95232 432 aaKnown RBP17.39■□□□□ 0.37
HDDC3-206ENST00000561036 KRT15P19012 456 aa17.39■□□□□ 0.37
HDDC3-206ENST00000561036 CCR2P41597 374 aa17.39■□□□□ 0.37
HDDC3-206ENST00000561036 SLC18A1P54219 525 aa17.39■□□□□ 0.37
HDDC3-206ENST00000561036 ZNF235Q14590 738 aa17.39■□□□□ 0.37
HDDC3-206ENST00000561036 EFTUD2Q15029 972 aaKnown RBP eCLIP17.39■□□□□ 0.37
HDDC3-206ENST00000561036 MPPE1Q53F39 396 aa17.39■□□□□ 0.37
HDDC3-206ENST00000561036 RNF219Q5W0B1 726 aaPredicted RBP17.39■□□□□ 0.37
HDDC3-206ENST00000561036 RNF43Q68DV7 783 aa17.39■□□□□ 0.37
HDDC3-206ENST00000561036 POTEHQ6S545 545 aa17.39■□□□□ 0.37
HDDC3-206ENST00000561036 CMTM8Q8IZV2 173 aa17.39■□□□□ 0.37
HDDC3-206ENST00000561036 IPMKQ8NFU5 416 aa17.39■□□□□ 0.37
HDDC3-206ENST00000561036 CDKL2Q92772 493 aa17.39■□□□□ 0.37
HDDC3-206ENST00000561036 MRGPRX2Q96LB1 330 aa17.39■□□□□ 0.37
HDDC3-206ENST00000561036 SPON2Q9BUD6 331 aa17.39■□□□□ 0.37
HDDC3-206ENST00000561036 FICDQ9BVA6 458 aa17.39■□□□□ 0.37
HDDC3-206ENST00000561036 FSD1LQ9BXM9 530 aa17.39■□□□□ 0.37
HDDC3-206ENST00000561036 MRM3Q9HC36 420 aaKnown RBP17.39■□□□□ 0.37
HDDC3-206ENST00000561036 ATP13A1Q9HD20 1204 aa17.39■□□□□ 0.37
HDDC3-206ENST00000561036 HCFC1R1Q9NWW0 138 aa17.39■□□□□ 0.37
HDDC3-206ENST00000561036 UBA2Q9UBT2 640 aaPredicted RBP17.39■□□□□ 0.37
HDDC3-206ENST00000561036 SOX13Q9UN79 622 aa17.39■□□□□ 0.37
HDDC3-206ENST00000561036 YBX2Q9Y2T7 364 aaKnown RBP17.39■□□□□ 0.37
HDDC3-206ENST00000561036 H0Y626 953 aa17.38■□□□□ 0.37
HDDC3-206ENST00000561036 PMPCBO75439 489 aa17.38■□□□□ 0.37
HDDC3-206ENST00000561036 FAM155BO75949 473 aa17.38■□□□□ 0.37
HDDC3-206ENST00000561036 CSPG5O95196 566 aa17.38■□□□□ 0.37
HDDC3-206ENST00000561036 MT-CYBP00156 380 aaPredicted RBP17.38■□□□□ 0.37
HDDC3-206ENST00000561036 BRAFP15056 766 aa17.38■□□□□ 0.37
HDDC3-206ENST00000561036 TCF3P15923 654 aa17.38■□□□□ 0.37
HDDC3-206ENST00000561036 CNTFP26441 200 aa17.38■□□□□ 0.37
HDDC3-206ENST00000561036 AVPR1AP37288 418 aa17.38■□□□□ 0.37
HDDC3-206ENST00000561036 SERPINB9P50453 376 aa17.38■□□□□ 0.37
HDDC3-206ENST00000561036 WNT3AP56704 352 aa17.38■□□□□ 0.37
HDDC3-206ENST00000561036 GNGT1P63211 74 aa17.38■□□□□ 0.37
HDDC3-206ENST00000561036 CRADDP78560 199 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms