RNA–Protein interactions for RNA: ENST00000560448.5

PKNOX1-209, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 5

Gene PKNOX1, Length 1,429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-209ENST00000560448 LRRN4CLQ8ND94 238 aa14.26□□□□□ -0.13
PKNOX1-209ENST00000560448 NKD2Q969F2 451 aaPredicted RBP14.26□□□□□ -0.13
PKNOX1-209ENST00000560448 RBM41Q96IZ5 413 aaKnown RBP14.26□□□□□ -0.13
PKNOX1-209ENST00000560448 ZNF599Q96NL3 588 aa14.26□□□□□ -0.13
PKNOX1-209ENST00000560448 PCED1AQ9H1Q7 454 aa14.26□□□□□ -0.13
PKNOX1-209ENST00000560448 ITM2CQ9NQX7 267 aa14.26□□□□□ -0.13
PKNOX1-209ENST00000560448 HAUS2Q9NVX0 235 aa14.26□□□□□ -0.13
PKNOX1-209ENST00000560448 USP36Q9P275 1121 aaKnown RBP14.26□□□□□ -0.13
PKNOX1-209ENST00000560448 SALL4Q9UJQ4 1053 aa14.26□□□□□ -0.13
PKNOX1-209ENST00000560448 LRRD1A4D1F6 860 aa14.25□□□□□ -0.13
PKNOX1-209ENST00000560448 TTC34A8MYJ7 566 aa14.25□□□□□ -0.13
PKNOX1-209ENST00000560448 MIF4GDA9UHW6 222 aaKnown RBP14.25□□□□□ -0.13
PKNOX1-209ENST00000560448 SIN3BO75182 1162 aa14.25□□□□□ -0.13
PKNOX1-209ENST00000560448 RHOBTB1O94844 696 aa14.25□□□□□ -0.13
PKNOX1-209ENST00000560448 LMNAP02545 664 aaKnown RBP14.25□□□□□ -0.13
PKNOX1-209ENST00000560448 PRNPP04156 253 aa14.25□□□□□ -0.13
PKNOX1-209ENST00000560448 HLA-EP13747 358 aa14.25□□□□□ -0.13
PKNOX1-209ENST00000560448 MX2P20592 715 aa14.25□□□□□ -0.13
PKNOX1-209ENST00000560448 C5AR1P21730 350 aa14.25□□□□□ -0.13
PKNOX1-209ENST00000560448 IL4RP24394 825 aa14.25□□□□□ -0.13
PKNOX1-209ENST00000560448 STK19P49842 368 aaPredicted RBP14.25□□□□□ -0.13
PKNOX1-209ENST00000560448 ZNF33AQ06730 810 aa14.25□□□□□ -0.13
PKNOX1-209ENST00000560448 DMWDQ09019 674 aa14.25□□□□□ -0.13
PKNOX1-209ENST00000560448 GRM3Q14832 879 aa14.25□□□□□ -0.13
PKNOX1-209ENST00000560448 PAFAH1B3Q15102 231 aaKnown RBP14.25□□□□□ -0.13
PKNOX1-209ENST00000560448 ELF2Q15723 593 aa14.25□□□□□ -0.13
PKNOX1-209ENST00000560448 ZNF354CQ86Y25 554 aa14.25□□□□□ -0.13
PKNOX1-209ENST00000560448 KATNAL2Q8IYT4 538 aa14.25□□□□□ -0.13
PKNOX1-209ENST00000560448 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.25□□□□□ -0.13
PKNOX1-209ENST00000560448 FATE1Q969F0 183 aa14.25□□□□□ -0.13
PKNOX1-209ENST00000560448 HMCESQ96FZ2 354 aa14.25□□□□□ -0.13
PKNOX1-209ENST00000560448 MAK16Q9BXY0 300 aaKnown RBP14.25□□□□□ -0.13
PKNOX1-209ENST00000560448 KLC2Q9H0B6 622 aa14.25□□□□□ -0.13
PKNOX1-209ENST00000560448 CDC23Q9UJX2 597 aa14.25□□□□□ -0.13
PKNOX1-209ENST00000560448 EFR3BQ9Y2G0 817 aa14.25□□□□□ -0.13
PKNOX1-209ENST00000560448 MACROD2A1Z1Q3 448 aa14.24□□□□□ -0.13
PKNOX1-209ENST00000560448 SLC7A4O43246 635 aa14.24□□□□□ -0.13
PKNOX1-209ENST00000560448 BUB1O43683 1085 aa14.24□□□□□ -0.13
PKNOX1-209ENST00000560448 PRAMEF11O60813 436 aa14.24□□□□□ -0.13
PKNOX1-209ENST00000560448 GSRP00390 522 aa14.24□□□□□ -0.13
PKNOX1-209ENST00000560448 AMPD1P23109 780 aa14.24□□□□□ -0.13
PKNOX1-209ENST00000560448 CTNNA1P35221 906 aaKnown RBP14.24□□□□□ -0.13
PKNOX1-209ENST00000560448 GJC1P36383 396 aa14.24□□□□□ -0.13
PKNOX1-209ENST00000560448 HSPA9P38646 679 aaKnown RBP14.24□□□□□ -0.13
PKNOX1-209ENST00000560448 CETN2P41208 172 aa14.24□□□□□ -0.13
PKNOX1-209ENST00000560448 COPS2P61201 443 aa14.24□□□□□ -0.13
PKNOX1-209ENST00000560448 SNRPD1P62314 119 aaKnown RBP14.24□□□□□ -0.13
PKNOX1-209ENST00000560448 RAD51Q06609 339 aa14.24□□□□□ -0.13
PKNOX1-209ENST00000560448 SIM2Q14190 667 aaPredicted RBP14.24□□□□□ -0.13
PKNOX1-209ENST00000560448 NAA30Q147X3 362 aaPredicted RBP14.24□□□□□ -0.13
PKNOX1-209ENST00000560448 CST6Q15828 149 aa14.24□□□□□ -0.13
PKNOX1-209ENST00000560448 PAPD7Q5XG87 772 aaKnown RBP14.24□□□□□ -0.13
PKNOX1-209ENST00000560448 LAIR1Q6GTX8 287 aa14.24□□□□□ -0.13
PKNOX1-209ENST00000560448 TIGD7Q6NT04 549 aaPredicted RBP14.24□□□□□ -0.13
PKNOX1-209ENST00000560448 KIAA1324Q6UXG2 1013 aaKnown RBP14.24□□□□□ -0.13
PKNOX1-209ENST00000560448 CEP68Q76N32 757 aa14.24□□□□□ -0.13
PKNOX1-209ENST00000560448 BZW1Q7L1Q6 419 aaKnown RBP14.24□□□□□ -0.13
PKNOX1-209ENST00000560448 ARHGAP12Q8IWW6 846 aa14.24□□□□□ -0.13
PKNOX1-209ENST00000560448 RCOR2Q8IZ40 523 aa14.24□□□□□ -0.13
PKNOX1-209ENST00000560448 BBS5Q8N3I7 341 aa14.24□□□□□ -0.13
PKNOX1-209ENST00000560448 LRRC57Q8N9N7 239 aa14.24□□□□□ -0.13
PKNOX1-209ENST00000560448 TMIEQ8NEW7 156 aa14.24□□□□□ -0.13
PKNOX1-209ENST00000560448 EXD1Q8NHP7 514 aa14.24□□□□□ -0.13
PKNOX1-209ENST00000560448 NSMCE1Q8WV22 266 aa14.24□□□□□ -0.13
PKNOX1-209ENST00000560448 PPP1R16AQ96I34 528 aa14.24□□□□□ -0.13
PKNOX1-209ENST00000560448 RNF157Q96PX1 679 aa14.24□□□□□ -0.13
PKNOX1-209ENST00000560448 CARD6Q9BX69 1037 aa14.24□□□□□ -0.13
PKNOX1-209ENST00000560448 TPSD1Q9BZJ3 242 aa14.24□□□□□ -0.13
PKNOX1-209ENST00000560448 SLC39A8Q9C0K1 460 aa14.24□□□□□ -0.13
PKNOX1-209ENST00000560448 SP110Q9HB58 689 aa14.24□□□□□ -0.13
PKNOX1-209ENST00000560448 PDFQ9HBH1 243 aa14.24□□□□□ -0.13
PKNOX1-209ENST00000560448 POLR3BQ9NW08 1133 aaPredicted RBP14.24□□□□□ -0.13
PKNOX1-209ENST00000560448 UBA2Q9UBT2 640 aaPredicted RBP14.24□□□□□ -0.13
PKNOX1-209ENST00000560448 FZD4Q9ULV1 537 aa14.24□□□□□ -0.13
PKNOX1-209ENST00000560448 NCKAP1Q9Y2A7 1128 aa14.24□□□□□ -0.13
PKNOX1-209ENST00000560448 WDFY4Q6ZS81 3184 aa14.24□□□□□ -0.13
PKNOX1-209ENST00000560448 HRO43593 1189 aa14.24□□□□□ -0.13
PKNOX1-209ENST00000560448 ZRANB2O95218 330 aaKnown RBP eCLIP14.24□□□□□ -0.13
PKNOX1-209ENST00000560448 CD160O95971 181 aa14.24□□□□□ -0.13
PKNOX1-209ENST00000560448 MT-CO1P00395 513 aa14.24□□□□□ -0.13
PKNOX1-209ENST00000560448 KRT1P04264 644 aa14.24□□□□□ -0.13
PKNOX1-209ENST00000560448 CTNNA2P26232 953 aa14.24□□□□□ -0.13
PKNOX1-209ENST00000560448 CD6P30203 668 aa14.24□□□□□ -0.13
PKNOX1-209ENST00000560448 HOXD11P31277 338 aaPredicted RBP14.24□□□□□ -0.13
PKNOX1-209ENST00000560448 MAPK8P45983 427 aa14.24□□□□□ -0.13
PKNOX1-209ENST00000560448 PXNP49023 591 aaPredicted RBP14.24□□□□□ -0.13
PKNOX1-209ENST00000560448 NR2C2P49116 596 aa14.24□□□□□ -0.13
PKNOX1-209ENST00000560448 PAPOLAP51003 745 aaKnown RBP14.24□□□□□ -0.13
PKNOX1-209ENST00000560448 RENBPP51606 427 aa14.24□□□□□ -0.13
PKNOX1-209ENST00000560448 RPS14P62263 151 aaKnown RBP14.24□□□□□ -0.13
PKNOX1-209ENST00000560448 TFDP2Q14188 446 aa14.24□□□□□ -0.13
PKNOX1-209ENST00000560448 PPP2R5EQ16537 467 aa14.24□□□□□ -0.13
PKNOX1-209ENST00000560448 MAP7D1Q3KQU3 841 aa14.24□□□□□ -0.13
PKNOX1-209ENST00000560448 ATP13A4Q4VNC1 1196 aa14.24□□□□□ -0.13
PKNOX1-209ENST00000560448 CARD16Q5EG05 197 aa14.24□□□□□ -0.13
PKNOX1-209ENST00000560448 TFDP3Q5H9I0 405 aa14.24□□□□□ -0.13
PKNOX1-209ENST00000560448 SLC9A4Q6AI14 798 aa14.24□□□□□ -0.13
PKNOX1-209ENST00000560448 LINGO4Q6UY18 593 aa14.24□□□□□ -0.13
PKNOX1-209ENST00000560448 Q6ZVU0 165 aa14.24□□□□□ -0.13
PKNOX1-209ENST00000560448 ATPAF2Q8N5M1 289 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms