RNA–Protein interactions for RNA: ENST00000560127.1

RABGGTA-213, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-213ENST00000560127 MIS12Q9H081 205 aa13.13□□□□□ -0.31
RABGGTA-213ENST00000560127 KIAA1257Q9ULG3 409 aa13.13□□□□□ -0.31
RABGGTA-213ENST00000560127 LRP4O75096 1905 aa13.13□□□□□ -0.31
RABGGTA-213ENST00000560127 DOPEY1Q5JWR5 2465 aa13.12□□□□□ -0.31
RABGGTA-213ENST00000560127 F5H5T6 163 aa13.12□□□□□ -0.31
RABGGTA-213ENST00000560127 H3BM21 787 aa13.12□□□□□ -0.31
RABGGTA-213ENST00000560127 KPNA3O00505 521 aaPredicted RBP13.12□□□□□ -0.31
RABGGTA-213ENST00000560127 SPINT1O43278 529 aa13.12□□□□□ -0.31
RABGGTA-213ENST00000560127 FBXO21O94952 628 aa13.12□□□□□ -0.31
RABGGTA-213ENST00000560127 APOEP02649 317 aa13.12□□□□□ -0.31
RABGGTA-213ENST00000560127 WT1P19544 449 aaPredicted RBP13.12□□□□□ -0.31
RABGGTA-213ENST00000560127 CHRNA3P32297 505 aa13.12□□□□□ -0.31
RABGGTA-213ENST00000560127 NUCB2P80303 420 aa13.12□□□□□ -0.31
RABGGTA-213ENST00000560127 ADAM9Q13443 819 aa13.12□□□□□ -0.31
RABGGTA-213ENST00000560127 CLCA4Q14CN2 919 aa13.12□□□□□ -0.31
RABGGTA-213ENST00000560127 SYPL2Q5VXT5 272 aa13.12□□□□□ -0.31
RABGGTA-213ENST00000560127 JAMLQ86YT9 394 aa13.12□□□□□ -0.31
RABGGTA-213ENST00000560127 CEP57L1Q8IYX8 460 aa13.12□□□□□ -0.31
RABGGTA-213ENST00000560127 WDR48Q8TAF3 677 aa13.12□□□□□ -0.31
RABGGTA-213ENST00000560127 HTR3CQ8WXA8 447 aa13.12□□□□□ -0.31
RABGGTA-213ENST00000560127 BTN2A3PQ96KV6 586 aa13.12□□□□□ -0.31
RABGGTA-213ENST00000560127 HSFY1Q96LI6 401 aa13.12□□□□□ -0.31
RABGGTA-213ENST00000560127 ZNF396Q96N95 335 aaPredicted RBP13.12□□□□□ -0.31
RABGGTA-213ENST00000560127 SLC25A18Q9H1K4 315 aa13.12□□□□□ -0.31
RABGGTA-213ENST00000560127 FAM13BQ9NYF5 915 aa13.12□□□□□ -0.31
RABGGTA-213ENST00000560127 DACH1Q9UI36 760 aa13.12□□□□□ -0.31
RABGGTA-213ENST00000560127 PCDHA7Q9UN72 937 aa13.12□□□□□ -0.31
RABGGTA-213ENST00000560127 PCDHGA4Q9Y5G9 962 aa13.12□□□□□ -0.31
RABGGTA-213ENST00000560127 OR51B4Q9Y5P0 310 aa13.12□□□□□ -0.31
RABGGTA-213ENST00000560127 ABCA12Q86UK0 2595 aa13.12□□□□□ -0.31
RABGGTA-213ENST00000560127 TCAF2A6NFQ2 919 aa13.11□□□□□ -0.31
RABGGTA-213ENST00000560127 M0QYV0 167 aa13.11□□□□□ -0.31
RABGGTA-213ENST00000560127 GCATO75600 419 aa13.11□□□□□ -0.31
RABGGTA-213ENST00000560127 PAK4O96013 591 aaPredicted RBP13.11□□□□□ -0.31
RABGGTA-213ENST00000560127 MT-CO1P00395 513 aa13.11□□□□□ -0.31
RABGGTA-213ENST00000560127 IGLV3-25P01717 112 aa13.11□□□□□ -0.31
RABGGTA-213ENST00000560127 LIPCP11150 499 aa13.11□□□□□ -0.31
RABGGTA-213ENST00000560127 SRCP12931 536 aa13.11□□□□□ -0.31
RABGGTA-213ENST00000560127 HGFP14210 728 aa13.11□□□□□ -0.31
RABGGTA-213ENST00000560127 RPL13P26373 211 aaKnown RBP13.11□□□□□ -0.31
RABGGTA-213ENST00000560127 RABIFP47224 123 aa13.11□□□□□ -0.31
RABGGTA-213ENST00000560127 IRAK1P51617 712 aa13.11□□□□□ -0.31
RABGGTA-213ENST00000560127 OXCT1P55809 520 aa13.11□□□□□ -0.31
RABGGTA-213ENST00000560127 CYP4F2P78329 520 aa13.11□□□□□ -0.31
RABGGTA-213ENST00000560127 CENPCQ03188 943 aa13.11□□□□□ -0.31
RABGGTA-213ENST00000560127 CCDC15Q0P6D6 951 aa13.11□□□□□ -0.31
RABGGTA-213ENST00000560127 EIF2B5Q13144 721 aaKnown RBP13.11□□□□□ -0.31
RABGGTA-213ENST00000560127 EIF3IQ13347 325 aaKnown RBP13.11□□□□□ -0.31
RABGGTA-213ENST00000560127 CBWD6Q4V339 395 aa13.11□□□□□ -0.31
RABGGTA-213ENST00000560127 CBWD3Q5JTY5 395 aa13.11□□□□□ -0.31
RABGGTA-213ENST00000560127 CBWD5Q5RIA9 395 aa13.11□□□□□ -0.31
RABGGTA-213ENST00000560127 ERN2Q76MJ5 926 aaKnown RBP13.11□□□□□ -0.31
RABGGTA-213ENST00000560127 RAB11FIP2Q7L804 512 aa13.11□□□□□ -0.31
RABGGTA-213ENST00000560127 VASH2Q86V25 355 aa13.11□□□□□ -0.31
RABGGTA-213ENST00000560127 RBFAQ8N0V3 343 aa13.11□□□□□ -0.31
RABGGTA-213ENST00000560127 TMIEQ8NEW7 156 aa13.11□□□□□ -0.31
RABGGTA-213ENST00000560127 OR2A12Q8NGT7 310 aa13.11□□□□□ -0.31
RABGGTA-213ENST00000560127 NAT6Q93015 286 aa13.11□□□□□ -0.31
RABGGTA-213ENST00000560127 FAM149B1Q96BN6 582 aa13.11□□□□□ -0.31
RABGGTA-213ENST00000560127 HDAC8Q9BY41 377 aa13.11□□□□□ -0.31
RABGGTA-213ENST00000560127 SLC17A9Q9BYT1 436 aa13.11□□□□□ -0.31
RABGGTA-213ENST00000560127 EPN3Q9H201 632 aa13.11□□□□□ -0.31
RABGGTA-213ENST00000560127 TCEAL2Q9H3H9 227 aaPredicted RBP13.11□□□□□ -0.31
RABGGTA-213ENST00000560127 SYNDIG1Q9H7V2 258 aa13.11□□□□□ -0.31
RABGGTA-213ENST00000560127 EPB41L5Q9HCM4 733 aa13.11□□□□□ -0.31
RABGGTA-213ENST00000560127 GEMIN8Q9NWZ8 242 aaKnown RBP13.11□□□□□ -0.31
RABGGTA-213ENST00000560127 MAPK8IP1Q9UQF2 711 aa13.11□□□□□ -0.31
RABGGTA-213ENST00000560127 CELSR2Q9HCU4 2923 aa13.1□□□□□ -0.31
RABGGTA-213ENST00000560127 KCNU1A8MYU2 1149 aa13.1□□□□□ -0.31
RABGGTA-213ENST00000560127 CALCAP01258 141 aa13.1□□□□□ -0.31
RABGGTA-213ENST00000560127 RPIAP49247 311 aa13.1□□□□□ -0.31
RABGGTA-213ENST00000560127 YWHAEP62258 255 aaKnown RBP13.1□□□□□ -0.31
RABGGTA-213ENST00000560127 PITX1P78337 314 aaPredicted RBP13.1□□□□□ -0.31
RABGGTA-213ENST00000560127 MAPK8IP2Q13387 824 aaPredicted RBP13.1□□□□□ -0.31
RABGGTA-213ENST00000560127 C1orf61Q13536 156 aa13.1□□□□□ -0.31
RABGGTA-213ENST00000560127 EIF4EBP2Q13542 120 aaPredicted RBP13.1□□□□□ -0.31
RABGGTA-213ENST00000560127 PDE1CQ14123 709 aaPredicted RBP13.1□□□□□ -0.31
RABGGTA-213ENST00000560127 CNGA2Q16280 664 aa13.1□□□□□ -0.31
RABGGTA-213ENST00000560127 ZCWPW2Q504Y3 356 aa13.1□□□□□ -0.31
RABGGTA-213ENST00000560127 MANEAQ5SRI9 462 aa13.1□□□□□ -0.31
RABGGTA-213ENST00000560127 TTC39BQ5VTQ0 682 aaPredicted RBP13.1□□□□□ -0.31
RABGGTA-213ENST00000560127 FBXL22Q6P050 247 aa13.1□□□□□ -0.31
RABGGTA-213ENST00000560127 BEND5Q7L4P6 421 aa13.1□□□□□ -0.31
RABGGTA-213ENST00000560127 CHST14Q8NCH0 376 aa13.1□□□□□ -0.31
RABGGTA-213ENST00000560127 GLMNQ92990 594 aa13.1□□□□□ -0.31
RABGGTA-213ENST00000560127 PSMG3-AS1Q96PY0 264 aa13.1□□□□□ -0.31
RABGGTA-213ENST00000560127 KLF6Q99612 283 aaPredicted RBP13.1□□□□□ -0.31
RABGGTA-213ENST00000560127 FUCA2Q9BTY2 467 aa13.1□□□□□ -0.31
RABGGTA-213ENST00000560127 FOXP3Q9BZS1 431 aa13.1□□□□□ -0.31
RABGGTA-213ENST00000560127 DYRK4Q9NR20 520 aa13.1□□□□□ -0.31
RABGGTA-213ENST00000560127 SPASTQ9UBP0 616 aa13.1□□□□□ -0.31
RABGGTA-213ENST00000560127 IPO11Q9UI26 975 aaKnown RBP13.1□□□□□ -0.31
RABGGTA-213ENST00000560127 RABGEF1Q9UJ41 708 aa13.1□□□□□ -0.31
RABGGTA-213ENST00000560127 VPS28Q9UK41 221 aa13.1□□□□□ -0.31
RABGGTA-213ENST00000560127 PNMA8BQ9ULN7 279 aaPredicted RBP13.1□□□□□ -0.31
RABGGTA-213ENST00000560127 PADI4Q9UM07 663 aa13.1□□□□□ -0.31
RABGGTA-213ENST00000560127 HS3ST2Q9Y278 367 aa13.1□□□□□ -0.31
RABGGTA-213ENST00000560127 MAN2B2Q9Y2E5 1009 aa13.1□□□□□ -0.31
RABGGTA-213ENST00000560127 COQ4Q9Y3A0 265 aa13.1□□□□□ -0.31
RABGGTA-213ENST00000560127 LMO7DNF2Z398 122 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms