RNA–Protein interactions for RNA: ENST00000559401.1

SNX1-207, Transcript of sorting nexin 1, humanhuman

TSL 2

Gene SNX1, Length 408 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-207ENST00000559401 GEMIN4P57678 1058 aaKnown RBP8.36□□□□□ -1.07
SNX1-207ENST00000559401 PPP2CBP62714 309 aa8.36□□□□□ -1.07
SNX1-207ENST00000559401 PPP2CAP67775 309 aa8.36□□□□□ -1.07
SNX1-207ENST00000559401 ARF5P84085 180 aa8.36□□□□□ -1.07
SNX1-207ENST00000559401 ZNF252P-AS1Q0IIN9 211 aa8.36□□□□□ -1.07
SNX1-207ENST00000559401 CNTN1Q12860 1018 aa8.36□□□□□ -1.07
SNX1-207ENST00000559401 PPP6R3Q5H9R7 873 aaPredicted RBP8.36□□□□□ -1.07
SNX1-207ENST00000559401 HGSNATQ68CP4 663 aa8.36□□□□□ -1.07
SNX1-207ENST00000559401 DPY19L3Q6ZPD9 716 aa8.36□□□□□ -1.07
SNX1-207ENST00000559401 NLRP14Q86W24 1093 aa8.36□□□□□ -1.07
SNX1-207ENST00000559401 PCDH20Q8N6Y1 951 aaKnown RBP8.36□□□□□ -1.07
SNX1-207ENST00000559401 RTL3Q8N8U3 475 aaKnown RBP8.36□□□□□ -1.07
SNX1-207ENST00000559401 CHST14Q8NCH0 376 aa8.36□□□□□ -1.07
SNX1-207ENST00000559401 OR2A12Q8NGT7 310 aa8.36□□□□□ -1.07
SNX1-207ENST00000559401 SYN2Q92777 582 aaPredicted RBP8.36□□□□□ -1.07
SNX1-207ENST00000559401 ARHGEF2Q92974 986 aaKnown RBP8.36□□□□□ -1.07
SNX1-207ENST00000559401 PPP1R16AQ96I34 528 aa8.36□□□□□ -1.07
SNX1-207ENST00000559401 SLC6A18Q96N87 628 aa8.36□□□□□ -1.07
SNX1-207ENST00000559401 SNRNP25Q9BV90 132 aaKnown RBP8.36□□□□□ -1.07
SNX1-207ENST00000559401 ACE2Q9BYF1 805 aaPredicted RBP8.36□□□□□ -1.07
SNX1-207ENST00000559401 ZDHHC5Q9C0B5 715 aa8.36□□□□□ -1.07
SNX1-207ENST00000559401 DEF6Q9H4E7 631 aa8.36□□□□□ -1.07
SNX1-207ENST00000559401 RETREG1Q9H6L5 497 aa8.36□□□□□ -1.07
SNX1-207ENST00000559401 ZDHHC6Q9H6R6 413 aa8.36□□□□□ -1.07
SNX1-207ENST00000559401 GAREM1Q9H706 876 aa8.36□□□□□ -1.07
SNX1-207ENST00000559401 ZNHIT6Q9NWK9 470 aaKnown RBP8.36□□□□□ -1.07
SNX1-207ENST00000559401 ZNF212Q9UDV6 495 aa8.36□□□□□ -1.07
SNX1-207ENST00000559401 IL36AQ9UHA7 158 aa8.36□□□□□ -1.07
SNX1-207ENST00000559401 NEU3Q9UQ49 428 aa8.36□□□□□ -1.07
SNX1-207ENST00000559401 ACTL7AQ9Y615 435 aa8.36□□□□□ -1.07
SNX1-207ENST00000559401 SLCO1B1Q9Y6L6 691 aa8.36□□□□□ -1.07
SNX1-207ENST00000559401 A0A087X0T9 212 aa8.35□□□□□ -1.07
SNX1-207ENST00000559401 A0A1W2PPC4 97 aa8.35□□□□□ -1.07
SNX1-207ENST00000559401 RASA4BC9J798 803 aa8.35□□□□□ -1.07
SNX1-207ENST00000559401 KRIT1O00522 736 aa8.35□□□□□ -1.07
SNX1-207ENST00000559401 TM4SF5O14894 197 aa8.35□□□□□ -1.07
SNX1-207ENST00000559401 GIPC1O14908 333 aa8.35□□□□□ -1.07
SNX1-207ENST00000559401 SLC7A4O43246 635 aa8.35□□□□□ -1.07
SNX1-207ENST00000559401 RASA4O43374 803 aa8.35□□□□□ -1.07
SNX1-207ENST00000559401 LEFTY1O75610 366 aa8.35□□□□□ -1.07
SNX1-207ENST00000559401 ZMPSTE24O75844 475 aa8.35□□□□□ -1.07
SNX1-207ENST00000559401 CTSLP07711 333 aa8.35□□□□□ -1.07
SNX1-207ENST00000559401 ADRB1P08588 477 aa8.35□□□□□ -1.07
SNX1-207ENST00000559401 FAM228BP0C875 321 aa8.35□□□□□ -1.07
SNX1-207ENST00000559401 C7P10643 843 aa8.35□□□□□ -1.07
SNX1-207ENST00000559401 MIPP30301 263 aa8.35□□□□□ -1.07
SNX1-207ENST00000559401 GRIA4P48058 902 aa8.35□□□□□ -1.07
SNX1-207ENST00000559401 CCNHP51946 323 aaPredicted RBP8.35□□□□□ -1.07
SNX1-207ENST00000559401 RHOAP61586 193 aa8.35□□□□□ -1.07
SNX1-207ENST00000559401 SLC20A2Q08357 652 aa8.35□□□□□ -1.07
SNX1-207ENST00000559401 CCDC15Q0P6D6 951 aa8.35□□□□□ -1.07
SNX1-207ENST00000559401 TRIM14Q14142 442 aa8.35□□□□□ -1.07
SNX1-207ENST00000559401 TSR1Q2NL82 804 aaKnown RBP8.35□□□□□ -1.07
SNX1-207ENST00000559401 SLC45A4Q5BKX6 768 aa8.35□□□□□ -1.07
SNX1-207ENST00000559401 CARD16Q5EG05 197 aa8.35□□□□□ -1.07
SNX1-207ENST00000559401 ARSIQ5FYB1 569 aa8.35□□□□□ -1.07
SNX1-207ENST00000559401 CCDC122Q5T0U0 273 aa8.35□□□□□ -1.07
SNX1-207ENST00000559401 ARTNQ5T4W7 220 aa8.35□□□□□ -1.07
SNX1-207ENST00000559401 ERMARDQ5T6L9 678 aa8.35□□□□□ -1.07
SNX1-207ENST00000559401 N4BP2L1Q5TBK1 243 aaPredicted RBP8.35□□□□□ -1.07
SNX1-207ENST00000559401 SPECC1LQ69YQ0 1117 aa8.35□□□□□ -1.07
SNX1-207ENST00000559401 ALKBH5Q6P6C2 394 aaKnown RBP8.35□□□□□ -1.07
SNX1-207ENST00000559401 IL27RAQ6UWB1 636 aa8.35□□□□□ -1.07
SNX1-207ENST00000559401 PRPF39Q86UA1 669 aaKnown RBP8.35□□□□□ -1.07
SNX1-207ENST00000559401 TMIEQ8NEW7 156 aa8.35□□□□□ -1.07
SNX1-207ENST00000559401 OR6K2Q8NGY2 324 aa8.35□□□□□ -1.07
SNX1-207ENST00000559401 SETD7Q8WTS6 366 aaKnown RBP8.35□□□□□ -1.07
SNX1-207ENST00000559401 ARRDC3Q96B67 414 aa8.35□□□□□ -1.07
SNX1-207ENST00000559401 SKA1Q96BD8 255 aa8.35□□□□□ -1.07
SNX1-207ENST00000559401 CELF6Q96J87 481 aaKnown RBP8.35□□□□□ -1.07
SNX1-207ENST00000559401 SERAC1Q96JX3 654 aa8.35□□□□□ -1.07
SNX1-207ENST00000559401 PEBP4Q96S96 227 aa8.35□□□□□ -1.07
SNX1-207ENST00000559401 MYOCQ99972 504 aa8.35□□□□□ -1.07
SNX1-207ENST00000559401 HEPHQ9BQS7 1158 aa8.35□□□□□ -1.07
SNX1-207ENST00000559401 CEP44Q9C0F1 390 aa8.35□□□□□ -1.07
SNX1-207ENST00000559401 THAP2Q9H0W7 228 aa8.35□□□□□ -1.07
SNX1-207ENST00000559401 ISCUQ9H1K1 167 aa8.35□□□□□ -1.07
SNX1-207ENST00000559401 ZWILCHQ9H900 591 aa8.35□□□□□ -1.07
SNX1-207ENST00000559401 IL21RQ9HBE5 538 aa8.35□□□□□ -1.07
SNX1-207ENST00000559401 HECAQ9UBI9 543 aaPredicted RBP8.35□□□□□ -1.07
SNX1-207ENST00000559401 ANAPC7Q9UJX3 599 aa8.35□□□□□ -1.07
SNX1-207ENST00000559401 PPM1HQ9ULR3 514 aa8.35□□□□□ -1.07
SNX1-207ENST00000559401 SNX11Q9Y5W9 270 aa8.35□□□□□ -1.07
SNX1-207ENST00000559401 ASCC3Q8N3C0 2202 aaKnown RBP8.35□□□□□ -1.07
SNX1-207ENST00000559401 SPTBN2O15020 2390 aa8.35□□□□□ -1.07
SNX1-207ENST00000559401 CACNA1EQ15878 2313 aa8.34□□□□□ -1.07
SNX1-207ENST00000559401 SPAARA0A1B0GVQ0 90 aa8.34□□□□□ -1.07
SNX1-207ENST00000559401 ZSCAN5CA6NGD5 496 aaPredicted RBP8.34□□□□□ -1.07
SNX1-207ENST00000559401 PLRG1O43660 514 aaKnown RBP8.34□□□□□ -1.07
SNX1-207ENST00000559401 KDELR3O43731 214 aa8.34□□□□□ -1.07
SNX1-207ENST00000559401 RNGTTO60942 597 aaKnown RBP8.34□□□□□ -1.07
SNX1-207ENST00000559401 LRCH4O75427 683 aa8.34□□□□□ -1.07
SNX1-207ENST00000559401 TMCC1O94876 653 aa8.34□□□□□ -1.07
SNX1-207ENST00000559401 PCDH8O95206 1070 aa8.34□□□□□ -1.07
SNX1-207ENST00000559401 IGSF6O95976 241 aa8.34□□□□□ -1.07
SNX1-207ENST00000559401 CEACAM1P13688 526 aa8.34□□□□□ -1.07
SNX1-207ENST00000559401 CSRP1P21291 193 aaKnown RBP8.34□□□□□ -1.07
SNX1-207ENST00000559401 CD38P28907 300 aa8.34□□□□□ -1.07
SNX1-207ENST00000559401 HTR7P34969 479 aa8.34□□□□□ -1.07
SNX1-207ENST00000559401 GJC1P36383 396 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms