RNA–Protein interactions for RNA: ENST00000559192.5

USP3-210, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best)

Gene USP3, Length 5,499 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-210ENST00000559192 USE1Q9NZ43 259 aa7.21□□□□□ -1.25
USP3-210ENST00000559192 XPR1Q9UBH6 696 aa7.21□□□□□ -1.25
USP3-210ENST00000559192 KIAA1257Q9ULG3 409 aa7.21□□□□□ -1.25
USP3-210ENST00000559192 AAR2Q9Y312 384 aaKnown RBP7.21□□□□□ -1.25
USP3-210ENST00000559192 NDUFAF1Q9Y375 327 aa7.21□□□□□ -1.25
USP3-210ENST00000559192 TMEM247A6NEH6 219 aa7.21□□□□□ -1.26
USP3-210ENST00000559192 TTLL13PA6NNM8 815 aa7.21□□□□□ -1.26
USP3-210ENST00000559192 ERI2A8K979 691 aaKnown RBP7.21□□□□□ -1.26
USP3-210ENST00000559192 HACD1B0YJ81 288 aa7.21□□□□□ -1.26
USP3-210ENST00000559192 H3BSA7 217 aa7.21□□□□□ -1.26
USP3-210ENST00000559192 ANXA9O76027 345 aa7.21□□□□□ -1.26
USP3-210ENST00000559192 CD151P48509 253 aa7.21□□□□□ -1.26
USP3-210ENST00000559192 CBX3Q13185 183 aa7.21□□□□□ -1.26
USP3-210ENST00000559192 KLF1Q13351 362 aaPredicted RBP7.21□□□□□ -1.26
USP3-210ENST00000559192 ADGRE1Q14246 886 aa7.21□□□□□ -1.26
USP3-210ENST00000559192 LSM12Q3MHD2 195 aaKnown RBP7.21□□□□□ -1.26
USP3-210ENST00000559192 SV2CQ496J9 727 aa7.21□□□□□ -1.26
USP3-210ENST00000559192 UBR7Q8N806 425 aa7.21□□□□□ -1.26
USP3-210ENST00000559192 ADCY4Q8NFM4 1077 aa7.21□□□□□ -1.26
USP3-210ENST00000559192 ZFAND2BQ8WV99 257 aa7.21□□□□□ -1.26
USP3-210ENST00000559192 FAM193BQ96PV7 902 aaPredicted RBP7.21□□□□□ -1.26
USP3-210ENST00000559192 TBL1YQ9BQ87 522 aa7.21□□□□□ -1.26
USP3-210ENST00000559192 C9orf16Q9BUW7 83 aa7.21□□□□□ -1.26
USP3-210ENST00000559192 CEP44Q9C0F1 390 aa7.21□□□□□ -1.26
USP3-210ENST00000559192 DEFB129Q9H1M3 183 aa7.21□□□□□ -1.26
USP3-210ENST00000559192 LIN28AQ9H9Z2 209 aaKnown RBP7.21□□□□□ -1.26
USP3-210ENST00000559192 ERAP1Q9NZ08 941 aa7.21□□□□□ -1.26
USP3-210ENST00000559192 PRG3Q9Y2Y8 225 aaPredicted RBP7.21□□□□□ -1.26
USP3-210ENST00000559192 PKD1L3Q7Z443 1732 aa7.21□□□□□ -1.26
USP3-210ENST00000559192 MTSS1O43312 755 aa7.21□□□□□ -1.26
USP3-210ENST00000559192 SORBS2O94875 1100 aaKnown RBP7.21□□□□□ -1.26
USP3-210ENST00000559192 LTFP02788 710 aa7.21□□□□□ -1.26
USP3-210ENST00000559192 ASLP04424 464 aa7.21□□□□□ -1.26
USP3-210ENST00000559192 ACO1P21399 889 aaKnown RBP7.21□□□□□ -1.26
USP3-210ENST00000559192 AKAP5P24588 427 aa7.21□□□□□ -1.26
USP3-210ENST00000559192 TKTL1P51854 596 aa7.21□□□□□ -1.26
USP3-210ENST00000559192 RAD23AP54725 363 aa7.21□□□□□ -1.26
USP3-210ENST00000559192 GEMP55040 296 aa7.21□□□□□ -1.26
USP3-210ENST00000559192 CSE1LP55060 971 aaKnown RBP7.21□□□□□ -1.26
USP3-210ENST00000559192 FCHO2Q0JRZ9 810 aa7.21□□□□□ -1.26
USP3-210ENST00000559192 CTBP1Q13363 440 aa7.21□□□□□ -1.26
USP3-210ENST00000559192 RGS21Q2M5E4 152 aa7.21□□□□□ -1.26
USP3-210ENST00000559192 DALRD3Q5D0E6 543 aaKnown RBP7.21□□□□□ -1.26
USP3-210ENST00000559192 ZNF618Q5T7W0 954 aa7.21□□□□□ -1.26
USP3-210ENST00000559192 SDE2Q6IQ49 451 aa7.21□□□□□ -1.26
USP3-210ENST00000559192 SLC35B2Q8TB61 432 aa7.21□□□□□ -1.26
USP3-210ENST00000559192 CERKQ8TCT0 537 aa7.21□□□□□ -1.26
USP3-210ENST00000559192 DENND1AQ8TEH3 1009 aa7.21□□□□□ -1.26
USP3-210ENST00000559192 TBRG4Q969Z0 631 aaKnown RBP eCLIP7.21□□□□□ -1.262e-7■■■■□ 19.6
USP3-210ENST00000559192 HSPBAP1Q96EW2 488 aa7.21□□□□□ -1.26
USP3-210ENST00000559192 PPP1R10Q96QC0 940 aaKnown RBP7.21□□□□□ -1.26
USP3-210ENST00000559192 SPON2Q9BUD6 331 aa7.21□□□□□ -1.26
USP3-210ENST00000559192 TMEM134Q9H6X4 195 aa7.21□□□□□ -1.26
USP3-210ENST00000559192 TRNAU1APQ9NX07 287 aaKnown RBP7.21□□□□□ -1.26
USP3-210ENST00000559192 STK39Q9UEW8 545 aa7.21□□□□□ -1.26
USP3-210ENST00000559192 SF3B1O75533 1304 aaKnown RBP eCLIP7.21□□□□□ -1.261e-6■■■■■ 175.4
USP3-210ENST00000559192 PHRF1Q9P1Y6 1649 aaKnown RBP7.21□□□□□ -1.26
USP3-210ENST00000559192 MYL4P12829 197 aa7.21□□□□□ -1.26
USP3-210ENST00000559192 LSM3P62310 102 aaKnown RBP7.21□□□□□ -1.26
USP3-210ENST00000559192 SQLEQ14534 574 aa7.21□□□□□ -1.26
USP3-210ENST00000559192 CA9Q16790 459 aa7.21□□□□□ -1.26
USP3-210ENST00000559192 CERCAMQ5T4B2 595 aa7.21□□□□□ -1.26
USP3-210ENST00000559192 PPP1R26Q5T8A7 1209 aaPredicted RBP7.21□□□□□ -1.26
USP3-210ENST00000559192 STYK1Q6J9G0 422 aa7.21□□□□□ -1.26
USP3-210ENST00000559192 FRMD7Q6ZUT3 714 aa7.21□□□□□ -1.26
USP3-210ENST00000559192 CENPLQ8N0S6 344 aaPredicted RBP7.21□□□□□ -1.26
USP3-210ENST00000559192 PHTF2Q8N3S3 785 aa7.21□□□□□ -1.26
USP3-210ENST00000559192 CCDC126Q96EE4 140 aa7.21□□□□□ -1.26
USP3-210ENST00000559192 B3GALT6Q96L58 329 aa7.21□□□□□ -1.26
USP3-210ENST00000559192 KCTD15Q96SI1 283 aaPredicted RBP7.21□□□□□ -1.26
USP3-210ENST00000559192 ZNF670Q9BS34 389 aa7.21□□□□□ -1.26
USP3-210ENST00000559192 ELOVL4Q9GZR5 314 aa7.21□□□□□ -1.26
USP3-210ENST00000559192 ADAMTS6Q9UKP5 1117 aa7.21□□□□□ -1.26
USP3-210ENST00000559192 SH3GLB1Q9Y371 365 aa7.21□□□□□ -1.26
USP3-210ENST00000559192 RBMX2Q9Y388 322 aaKnown RBP7.21□□□□□ -1.26
USP3-210ENST00000559192 STX16-NPEPL1H3BU86 382 aa7.2□□□□□ -1.26
USP3-210ENST00000559192 STX7O15400 261 aaKnown RBP7.2□□□□□ -1.26
USP3-210ENST00000559192 PLIN3O60664 434 aa7.2□□□□□ -1.26
USP3-210ENST00000559192 LYPLA2O95372 231 aa7.2□□□□□ -1.26
USP3-210ENST00000559192 CHRNGP07510 517 aa7.2□□□□□ -1.26
USP3-210ENST00000559192 SNRPB2P08579 225 aaKnown RBP7.2□□□□□ -1.26
USP3-210ENST00000559192 NFKB1P19838 968 aa7.2□□□□□ -1.26
USP3-210ENST00000559192 PSMB9P28065 219 aa7.2□□□□□ -1.26
USP3-210ENST00000559192 CRABP2P29373 138 aa7.2□□□□□ -1.26
USP3-210ENST00000559192 SOX6P35712 828 aa7.2□□□□□ -1.26
USP3-210ENST00000559192 TAF6P49848 677 aa7.2□□□□□ -1.26
USP3-210ENST00000559192 CCNG1P51959 295 aa7.2□□□□□ -1.26
USP3-210ENST00000559192 IL5RAQ01344 420 aa7.2□□□□□ -1.26
USP3-210ENST00000559192 CHRNB3Q05901 458 aa7.2□□□□□ -1.26
USP3-210ENST00000559192 GTF2H3Q13889 308 aa7.2□□□□□ -1.26
USP3-210ENST00000559192 PLCL1Q15111 1095 aa7.2□□□□□ -1.26
USP3-210ENST00000559192 C1orf220Q5T0J3 134 aa7.2□□□□□ -1.26
USP3-210ENST00000559192 SLC9A4Q6AI14 798 aa7.2□□□□□ -1.26
USP3-210ENST00000559192 STK32CQ86UX6 486 aa7.2□□□□□ -1.26
USP3-210ENST00000559192 VSIG10LQ86VR7 867 aa7.2□□□□□ -1.26
USP3-210ENST00000559192 PSTKQ8IV42 348 aaKnown RBP7.2□□□□□ -1.26
USP3-210ENST00000559192 PYROXD2Q8N2H3 581 aa7.2□□□□□ -1.26
USP3-210ENST00000559192 CHST13Q8NET6 341 aa7.2□□□□□ -1.26
USP3-210ENST00000559192 ACTRT2Q8TDY3 377 aa7.2□□□□□ -1.26
USP3-210ENST00000559192 NDRG1Q92597 394 aaKnown RBP7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms