RNA–Protein interactions for RNA: ENST00000558924.1

SEC11A-206, Transcript of SEC11 homolog A, signal peptidase complex subunit, humanhuman

TSL 1 (best)

Gene SEC11A, Length 3,626 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC11A-206ENST00000558924 DUSP28Q4G0W2 176 aa12.35□□□□□ -0.43
SEC11A-206ENST00000558924 SLC9B1Q4ZJI4 515 aa12.35□□□□□ -0.43
SEC11A-206ENST00000558924 FBXO48Q5FWF7 155 aa12.35□□□□□ -0.43
SEC11A-206ENST00000558924 OSTM1Q86WC4 334 aa12.35□□□□□ -0.43
SEC11A-206ENST00000558924 SLC7A5P1Q8MH63 180 aa12.35□□□□□ -0.43
SEC11A-206ENST00000558924 TDRD5Q8NAT2 981 aaKnown RBP12.35□□□□□ -0.43
SEC11A-206ENST00000558924 ARRDC4Q8NCT1 418 aa12.35□□□□□ -0.43
SEC11A-206ENST00000558924 OR52B2Q96RD2 323 aa12.35□□□□□ -0.43
SEC11A-206ENST00000558924 DNAI2Q9GZS0 605 aa12.35□□□□□ -0.43
SEC11A-206ENST00000558924 TEX264Q9Y6I9 313 aa12.35□□□□□ -0.43
SEC11A-206ENST00000558924 SAC3D1A6NKF1 404 aa12.34□□□□□ -0.43
SEC11A-206ENST00000558924 SDR42E2A6NKP2 422 aa12.34□□□□□ -0.43
SEC11A-206ENST00000558924 MSI1O43347 362 aaKnown RBP12.34□□□□□ -0.43
SEC11A-206ENST00000558924 MT-ND1P03886 318 aa12.34□□□□□ -0.43
SEC11A-206ENST00000558924 HDCP19113 662 aa12.34□□□□□ -0.43
SEC11A-206ENST00000558924 THPOP40225 353 aa12.34□□□□□ -0.43
SEC11A-206ENST00000558924 RGS2P41220 211 aa12.34□□□□□ -0.43
SEC11A-206ENST00000558924 CLCNKBP51801 687 aa12.34□□□□□ -0.43
SEC11A-206ENST00000558924 KPNA1P52294 538 aaPredicted RBP12.34□□□□□ -0.43
SEC11A-206ENST00000558924 CHN2P52757 468 aa12.34□□□□□ -0.43
SEC11A-206ENST00000558924 CDH15P55291 814 aa12.34□□□□□ -0.43
SEC11A-206ENST00000558924 DCTN2Q13561 401 aaKnown RBP12.34□□□□□ -0.43
SEC11A-206ENST00000558924 USP10Q14694 798 aaKnown RBP12.34□□□□□ -0.43
SEC11A-206ENST00000558924 RARS2Q5T160 578 aaKnown RBP12.34□□□□□ -0.43
SEC11A-206ENST00000558924 IFNLR1Q8IU57 520 aaPredicted RBP12.34□□□□□ -0.43
SEC11A-206ENST00000558924 MYO1HQ8N1T3 1032 aa12.34□□□□□ -0.43
SEC11A-206ENST00000558924 ZNF276Q8N554 614 aa12.34□□□□□ -0.43
SEC11A-206ENST00000558924 SLC35F5Q8WV83 523 aa12.34□□□□□ -0.43
SEC11A-206ENST00000558924 KHSRPQ92945 711 aaKnown RBP eCLIP12.34□□□□□ -0.43
SEC11A-206ENST00000558924 Q9H521 79 aa12.34□□□□□ -0.43
SEC11A-206ENST00000558924 WDCPQ9H6R7 721 aa12.34□□□□□ -0.43
SEC11A-206ENST00000558924 CCDC167Q9P0B6 97 aa12.34□□□□□ -0.43
SEC11A-206ENST00000558924 ATAD5Q96QE3 1844 aa12.34□□□□□ -0.43
SEC11A-206ENST00000558924 TMEM233B4DJY2 109 aa12.34□□□□□ -0.43
SEC11A-206ENST00000558924 AGRPO00253 132 aa12.34□□□□□ -0.43
SEC11A-206ENST00000558924 CCL22O00626 93 aa12.34□□□□□ -0.43
SEC11A-206ENST00000558924 RFPL1O75677 317 aa12.34□□□□□ -0.43
SEC11A-206ENST00000558924 KLHL2O95198 593 aa12.34□□□□□ -0.43
SEC11A-206ENST00000558924 HNRNPLP14866 589 aaKnown RBP eCLIP12.34□□□□□ -0.43
SEC11A-206ENST00000558924 DARSP14868 501 aaKnown RBP12.34□□□□□ -0.43
SEC11A-206ENST00000558924 CDH5P33151 784 aaPredicted RBP12.34□□□□□ -0.43
SEC11A-206ENST00000558924 DCAF4L1Q3SXM0 396 aa12.34□□□□□ -0.43
SEC11A-206ENST00000558924 MARCH8Q5T0T0 291 aa12.34□□□□□ -0.43
SEC11A-206ENST00000558924 HOMEZQ8IX15 550 aa12.34□□□□□ -0.43
SEC11A-206ENST00000558924 NAT16Q8N8M0 369 aa12.34□□□□□ -0.43
SEC11A-206ENST00000558924 SPATA22Q8NHS9 363 aa12.34□□□□□ -0.43
SEC11A-206ENST00000558924 TMEM174Q8WUU8 243 aa12.34□□□□□ -0.43
SEC11A-206ENST00000558924 PHF21BQ96EK2 531 aa12.34□□□□□ -0.43
SEC11A-206ENST00000558924 EBNA1BP2Q99848 306 aaKnown RBP12.34□□□□□ -0.43
SEC11A-206ENST00000558924 PCDHAC1Q9H158 963 aa12.34□□□□□ -0.43
SEC11A-206ENST00000558924 TCF7L2Q9NQB0 619 aa12.34□□□□□ -0.43
SEC11A-206ENST00000558924 CHST12Q9NRB3 414 aa12.34□□□□□ -0.43
SEC11A-206ENST00000558924 PIGVQ9NUD9 493 aa12.34□□□□□ -0.43
SEC11A-206ENST00000558924 SELENONQ9NZV5 590 aa12.34□□□□□ -0.43
SEC11A-206ENST00000558924 SFMBT1Q9UHJ3 866 aa12.34□□□□□ -0.43
SEC11A-206ENST00000558924 GJD2Q9UKL4 321 aa12.34□□□□□ -0.43
SEC11A-206ENST00000558924 TK2O00142 265 aa12.34□□□□□ -0.43
SEC11A-206ENST00000558924 AKAP10O43572 662 aa12.34□□□□□ -0.43
SEC11A-206ENST00000558924 GABBR2O75899 941 aa12.34□□□□□ -0.43
SEC11A-206ENST00000558924 GRIK1P39086 918 aa12.34□□□□□ -0.43
SEC11A-206ENST00000558924 SLC12A2P55011 1212 aa12.34□□□□□ -0.43
SEC11A-206ENST00000558924 MTTPP55157 894 aa12.34□□□□□ -0.43
SEC11A-206ENST00000558924 KCNJ11Q14654 390 aa12.34□□□□□ -0.43
SEC11A-206ENST00000558924 UGT2A3Q6UWM9 527 aa12.34□□□□□ -0.43
SEC11A-206ENST00000558924 OTOP3Q7RTS5 596 aa12.34□□□□□ -0.43
SEC11A-206ENST00000558924 MIB1Q86YT6 1006 aa12.34□□□□□ -0.43
SEC11A-206ENST00000558924 NUP93Q8N1F7 819 aa12.34□□□□□ -0.43
SEC11A-206ENST00000558924 GIPC3Q8TF64 312 aa12.34□□□□□ -0.43
SEC11A-206ENST00000558924 PABPC5Q96DU9 382 aaKnown RBP12.34□□□□□ -0.43
SEC11A-206ENST00000558924 APBA2Q99767 749 aa12.34□□□□□ -0.43
SEC11A-206ENST00000558924 TKTL2Q9H0I9 626 aa12.34□□□□□ -0.43
SEC11A-206ENST00000558924 ABI2Q9NYB9 513 aaPredicted RBP12.34□□□□□ -0.43
SEC11A-206ENST00000558924 PTTG2Q9NZH5 202 aa12.34□□□□□ -0.43
SEC11A-206ENST00000558924 MKI67P46013 3256 aaKnown RBP12.33□□□□□ -0.43
SEC11A-206ENST00000558924 DNAJC25-GNG10A0A024R161 153 aa12.33□□□□□ -0.44
SEC11A-206ENST00000558924 A0A088AWK7 358 aa12.33□□□□□ -0.44
SEC11A-206ENST00000558924 A0A096LPK6 155 aa12.33□□□□□ -0.44
SEC11A-206ENST00000558924 RNF103-CHMP3A0A140T963 221 aa12.33□□□□□ -0.44
SEC11A-206ENST00000558924 TTC24A2A3L6 582 aaPredicted RBP12.33□□□□□ -0.44
SEC11A-206ENST00000558924 TMEM247A6NEH6 219 aa12.33□□□□□ -0.44
SEC11A-206ENST00000558924 CHADO15335 359 aa12.33□□□□□ -0.44
SEC11A-206ENST00000558924 CD4P01730 458 aa12.33□□□□□ -0.44
SEC11A-206ENST00000558924 SERPINA6P08185 405 aa12.33□□□□□ -0.44
SEC11A-206ENST00000558924 COX4I1P13073 169 aa12.33□□□□□ -0.44
SEC11A-206ENST00000558924 GSTM4Q03013 218 aa12.33□□□□□ -0.44
SEC11A-206ENST00000558924 PLD6Q8N2A8 252 aaKnown RBP12.33□□□□□ -0.44
SEC11A-206ENST00000558924 BHMTQ93088 406 aa12.33□□□□□ -0.44
SEC11A-206ENST00000558924 TRIM8Q9BZR9 551 aa12.33□□□□□ -0.44
SEC11A-206ENST00000558924 POPDC2Q9HBU9 364 aa12.33□□□□□ -0.44
SEC11A-206ENST00000558924 CHRAC1Q9NRG0 131 aa12.33□□□□□ -0.44
SEC11A-206ENST00000558924 AP4B1Q9Y6B7 739 aa12.33□□□□□ -0.44
SEC11A-206ENST00000558924 DNAJA2O60884 412 aa12.33□□□□□ -0.44
SEC11A-206ENST00000558924 GARSP41250 739 aaKnown RBP12.33□□□□□ -0.44
SEC11A-206ENST00000558924 HALP42357 657 aa12.33□□□□□ -0.44
SEC11A-206ENST00000558924 ETV4P43268 484 aa12.33□□□□□ -0.44
SEC11A-206ENST00000558924 PSEN2P49810 448 aa12.33□□□□□ -0.44
SEC11A-206ENST00000558924 STILQ15468 1287 aa12.33□□□□□ -0.44
SEC11A-206ENST00000558924 SV2CQ496J9 727 aa12.33□□□□□ -0.44
SEC11A-206ENST00000558924 ITPRIPL1Q6GPH6 555 aa12.33□□□□□ -0.44
SEC11A-206ENST00000558924 TMEM214Q6NUQ4 689 aaKnown RBP12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 86.5 ms