RNA–Protein interactions for RNA: ENST00000558662.5

HMBOX1-212, Transcript of homeobox containing 1, humanhuman

TSL 5 BASIC

Gene HMBOX1, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-212ENST00000558662 AGPAT4Q9NRZ5 378 aa16.43■□□□□ 0.22
HMBOX1-212ENST00000558662 GDAP2Q9NXN4 497 aa16.43■□□□□ 0.22
HMBOX1-212ENST00000558662 TMEM181Q9P2C4 612 aa16.43■□□□□ 0.22
HMBOX1-212ENST00000558662 VWA5AO00534 786 aa16.43■□□□□ 0.22
HMBOX1-212ENST00000558662 ACOX3O15254 700 aa16.43■□□□□ 0.22
HMBOX1-212ENST00000558662 PHGDHO43175 533 aaKnown RBP16.43■□□□□ 0.22
HMBOX1-212ENST00000558662 ABCB7O75027 752 aa16.43■□□□□ 0.22
HMBOX1-212ENST00000558662 NELFEP18615 380 aaKnown RBP16.43■□□□□ 0.22
HMBOX1-212ENST00000558662 MIPP30301 263 aa16.43■□□□□ 0.22
HMBOX1-212ENST00000558662 LRP8Q14114 963 aa16.43■□□□□ 0.22
HMBOX1-212ENST00000558662 SELPLGQ14242 412 aa16.43■□□□□ 0.22
HMBOX1-212ENST00000558662 SQLEQ14534 574 aa16.43■□□□□ 0.22
HMBOX1-212ENST00000558662 MAPRE1Q15691 268 aaKnown RBP16.43■□□□□ 0.22
HMBOX1-212ENST00000558662 TRIM71Q2Q1W2 868 aaKnown RBP16.43■□□□□ 0.22
HMBOX1-212ENST00000558662 SMUG1Q53HV7 270 aa16.43■□□□□ 0.22
HMBOX1-212ENST00000558662 GTF2IRD2BQ6EKJ0 949 aa16.43■□□□□ 0.22
HMBOX1-212ENST00000558662 CLEC14AQ86T13 490 aa16.43■□□□□ 0.22
HMBOX1-212ENST00000558662 GTF2IRD2Q86UP8 949 aa16.43■□□□□ 0.22
HMBOX1-212ENST00000558662 SEZ6LQ9BYH1 1024 aa16.43■□□□□ 0.22
HMBOX1-212ENST00000558662 HOXD1Q9GZZ0 328 aa16.43■□□□□ 0.22
HMBOX1-212ENST00000558662 SMPD3Q9NY59 655 aaPredicted RBP16.43■□□□□ 0.22
HMBOX1-212ENST00000558662 PI4KBQ9UBF8 816 aa16.43■□□□□ 0.22
HMBOX1-212ENST00000558662 APOL1O14791 398 aa16.42■□□□□ 0.22
HMBOX1-212ENST00000558662 NDUFB10O96000 172 aa16.42■□□□□ 0.22
HMBOX1-212ENST00000558662 TFEBP19484 476 aa16.42■□□□□ 0.22
HMBOX1-212ENST00000558662 IDUAP35475 653 aa16.42■□□□□ 0.22
HMBOX1-212ENST00000558662 OPRL1P41146 370 aa16.42■□□□□ 0.22
HMBOX1-212ENST00000558662 KPNA1P52294 538 aaPredicted RBP16.42■□□□□ 0.22
HMBOX1-212ENST00000558662 GABARAPL2P60520 117 aa16.42■□□□□ 0.22
HMBOX1-212ENST00000558662 KRR1Q13601 381 aaKnown RBP16.42■□□□□ 0.22
HMBOX1-212ENST00000558662 SLC12A1Q13621 1099 aa16.42■□□□□ 0.22
HMBOX1-212ENST00000558662 SLC9A4Q6AI14 798 aa16.42■□□□□ 0.22
HMBOX1-212ENST00000558662 IQSEC1Q6DN90 963 aa16.42■□□□□ 0.22
HMBOX1-212ENST00000558662 GPAT2Q6NUI2 795 aa16.42■□□□□ 0.22
HMBOX1-212ENST00000558662 ZYG11AQ6WRX3 759 aa16.42■□□□□ 0.22
HMBOX1-212ENST00000558662 KIAA0408Q6ZU52 694 aa16.42■□□□□ 0.22
HMBOX1-212ENST00000558662 CBR4Q8N4T8 237 aa16.42■□□□□ 0.22
HMBOX1-212ENST00000558662 AFAP1L2Q8N4X5 818 aa16.42■□□□□ 0.22
HMBOX1-212ENST00000558662 MCPH1Q8NEM0 835 aa16.42■□□□□ 0.22
HMBOX1-212ENST00000558662 ZSCAN18Q8TBC5 510 aaPredicted RBP16.42■□□□□ 0.22
HMBOX1-212ENST00000558662 ZNF486Q96H40 463 aaPredicted RBP16.42■□□□□ 0.22
HMBOX1-212ENST00000558662 SLC25A23Q9BV35 468 aa16.42■□□□□ 0.22
HMBOX1-212ENST00000558662 OR2B2Q9GZK3 357 aa16.42■□□□□ 0.22
HMBOX1-212ENST00000558662 DDX4Q9NQI0 724 aaKnown RBP16.42■□□□□ 0.22
HMBOX1-212ENST00000558662 COPG1Q9Y678 874 aaKnown RBP16.42■□□□□ 0.22
HMBOX1-212ENST00000558662 MN1Q10571 1320 aaPredicted RBP16.42■□□□□ 0.22
HMBOX1-212ENST00000558662 NOTOA8MTQ0 251 aa16.41■□□□□ 0.22
HMBOX1-212ENST00000558662 BBIP1A8MTZ0 92 aa16.41■□□□□ 0.22
HMBOX1-212ENST00000558662 GRID2O43424 1007 aa16.41■□□□□ 0.22
HMBOX1-212ENST00000558662 ENTPD3O75355 529 aa16.41■□□□□ 0.22
HMBOX1-212ENST00000558662 TOP3BO95985 862 aaKnown RBP16.41■□□□□ 0.22
HMBOX1-212ENST00000558662 CFBP00751 764 aa16.41■□□□□ 0.22
HMBOX1-212ENST00000558662 PIGRP01833 764 aa16.41■□□□□ 0.22
HMBOX1-212ENST00000558662 GPIP06744 558 aa16.41■□□□□ 0.22
HMBOX1-212ENST00000558662 GRK3P35626 688 aa16.41■□□□□ 0.22
HMBOX1-212ENST00000558662 CHRNEQ04844 493 aa16.41■□□□□ 0.22
HMBOX1-212ENST00000558662 ILF2Q12905 390 aaKnown RBP16.41■□□□□ 0.22
HMBOX1-212ENST00000558662 SF3B4Q15427 424 aaKnown RBP eCLIP16.41■□□□□ 0.223e-10■□□□□ 10.3
HMBOX1-212ENST00000558662 STILQ15468 1287 aa16.41■□□□□ 0.22
HMBOX1-212ENST00000558662 CCDC14Q49A88 953 aa16.41■□□□□ 0.22
HMBOX1-212ENST00000558662 SPANXN3Q5MJ09 141 aa16.41■□□□□ 0.22
HMBOX1-212ENST00000558662 C8orf82Q6P1X6 216 aaPredicted RBP16.41■□□□□ 0.22
HMBOX1-212ENST00000558662 VASH1Q7L8A9 365 aaPredicted RBP16.41■□□□□ 0.22
HMBOX1-212ENST00000558662 PLD5Q8N7P1 536 aa16.41■□□□□ 0.22
HMBOX1-212ENST00000558662 CPXM1Q96SM3 734 aa16.41■□□□□ 0.22
HMBOX1-212ENST00000558662 TBCBQ99426 244 aa16.41■□□□□ 0.22
HMBOX1-212ENST00000558662 MTG1Q9BT17 334 aaPredicted RBP16.41■□□□□ 0.22
HMBOX1-212ENST00000558662 GATA5Q9BWX5 397 aaPredicted RBP16.41■□□□□ 0.22
HMBOX1-212ENST00000558662 SNX15Q9NRS6 342 aa16.41■□□□□ 0.22
HMBOX1-212ENST00000558662 PRR12Q9ULL5 1215 aa16.41■□□□□ 0.22
HMBOX1-212ENST00000558662 TIMM22Q9Y584 194 aa16.41■□□□□ 0.22
HMBOX1-212ENST00000558662 CNTNAP4Q9C0A0 1308 aa16.41■□□□□ 0.22
HMBOX1-212ENST00000558662 RNF103-CHMP3A0A140T963 221 aa16.41■□□□□ 0.22
HMBOX1-212ENST00000558662 E7ENX8 843 aa16.41■□□□□ 0.22
HMBOX1-212ENST00000558662 DHX15O43143 795 aaKnown RBP16.41■□□□□ 0.22
HMBOX1-212ENST00000558662 NPM3O75607 178 aaKnown RBP16.41■□□□□ 0.22
HMBOX1-212ENST00000558662 SRP72O76094 671 aaKnown RBP16.41■□□□□ 0.22
HMBOX1-212ENST00000558662 S100BP04271 92 aaPredicted RBP16.41■□□□□ 0.22
HMBOX1-212ENST00000558662 BMP1P13497 986 aa16.41■□□□□ 0.22
HMBOX1-212ENST00000558662 PSMA4P25789 261 aaKnown RBP16.41■□□□□ 0.22
HMBOX1-212ENST00000558662 MSX2P35548 267 aaPredicted RBP16.41■□□□□ 0.22
HMBOX1-212ENST00000558662 NR2C2P49116 596 aa16.41■□□□□ 0.22
HMBOX1-212ENST00000558662 ATP4BP51164 291 aa16.41■□□□□ 0.22
HMBOX1-212ENST00000558662 CDH6P55285 790 aa16.41■□□□□ 0.22
HMBOX1-212ENST00000558662 BCAR1P56945 870 aa16.41■□□□□ 0.22
HMBOX1-212ENST00000558662 NME3Q13232 169 aa16.41■□□□□ 0.22
HMBOX1-212ENST00000558662 BOLA3Q53S33 107 aa16.41■□□□□ 0.22
HMBOX1-212ENST00000558662 KCNT1Q5JUK3 1230 aa16.41■□□□□ 0.22
HMBOX1-212ENST00000558662 ARMC8Q8IUR7 673 aa16.41■□□□□ 0.22
HMBOX1-212ENST00000558662 RNF148Q8N7C7 305 aa16.41■□□□□ 0.22
HMBOX1-212ENST00000558662 NMRAL1Q9HBL8 299 aa16.41■□□□□ 0.22
HMBOX1-212ENST00000558662 SLC38A10Q9HBR0 1119 aa16.41■□□□□ 0.22
HMBOX1-212ENST00000558662 LRRC4Q9HBW1 653 aa16.41■□□□□ 0.22
HMBOX1-212ENST00000558662 CACNA2D2Q9NY47 1150 aa16.41■□□□□ 0.22
HMBOX1-212ENST00000558662 IFT80Q9P2H3 777 aaPredicted RBP16.41■□□□□ 0.22
HMBOX1-212ENST00000558662 GGA1Q9UJY5 639 aa16.41■□□□□ 0.22
HMBOX1-212ENST00000558662 SERPINA10Q9UK55 444 aa16.41■□□□□ 0.22
HMBOX1-212ENST00000558662 UGT2A1Q9Y4X1 527 aa16.41■□□□□ 0.22
HMBOX1-212ENST00000558662 ANGPTL3Q9Y5C1 460 aa16.41■□□□□ 0.22
HMBOX1-212ENST00000558662 ADGRA2Q96PE1 1338 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms